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1045 lines
44 KiB
Scheme
1045 lines
44 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019 Ludovic Courtès <ludo@gnu.org>
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;;; Copyright © 2015, 2017 Ricardo Wurmus <rekado@elephly.net>
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;;; Copyright © 2017 Muriithi Frederick Muriuki <fredmanglis@gmail.com>
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;;; Copyright © 2017, 2018 Oleg Pykhalov <go.wigust@gmail.com>
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;;; Copyright © 2017 Roel Janssen <roel@gnu.org>
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;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
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;;; Copyright © 2018 Julien Lepiller <julien@lepiller.eu>
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;;; Copyright © 2018, 2019 Rutger Helling <rhelling@mykolab.com>
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;;; Copyright © 2018 Sou Bunnbu <iyzsong@member.fsf.org>
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;;; Copyright © 2018, 2019 Eric Bavier <bavier@member.fsf.org>
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;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il>
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;;; Copyright © 2019 Jonathan Brielmaier <jonathan.brielmaier@web.de>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (gnu packages package-management)
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#:use-module (gnu packages)
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#:use-module (gnu packages acl)
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#:use-module (gnu packages attr)
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#:use-module (gnu packages avahi)
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#:use-module (gnu packages autotools)
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#:use-module (gnu packages backup)
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#:use-module (gnu packages base)
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#:use-module (gnu packages bdw-gc)
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#:use-module (gnu packages bison)
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#:use-module (gnu packages bootstrap) ;for 'bootstrap-guile-origin'
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#:use-module (gnu packages check)
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#:use-module (gnu packages compression)
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#:use-module (gnu packages cpio)
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#:use-module (gnu packages crypto)
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#:use-module (gnu packages curl)
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#:use-module (gnu packages dbm)
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#:use-module (gnu packages docbook)
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#:use-module (gnu packages file)
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#:use-module (gnu packages gettext)
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#:use-module (gnu packages glib)
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#:use-module (gnu packages gnome)
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#:use-module (gnu packages gnupg)
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#:use-module (gnu packages graphviz)
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#:use-module (gnu packages gtk)
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#:use-module (gnu packages guile)
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#:use-module (gnu packages guile-xyz)
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#:use-module (gnu packages linux)
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#:use-module (gnu packages lisp)
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#:use-module (gnu packages man)
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#:use-module (gnu packages nettle)
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#:use-module (gnu packages nss)
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#:use-module (gnu packages patchutils)
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#:use-module (gnu packages perl)
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#:use-module (gnu packages perl-check)
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#:use-module (gnu packages pkg-config)
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#:use-module (gnu packages popt)
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#:use-module (gnu packages python)
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#:use-module (gnu packages python-web)
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#:use-module (gnu packages python-xyz)
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#:use-module (gnu packages serialization)
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#:use-module (gnu packages sqlite)
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#:use-module (gnu packages ssh)
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#:use-module (gnu packages texinfo)
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#:use-module (gnu packages time)
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#:use-module (gnu packages tls)
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#:use-module (gnu packages vim)
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#:use-module (gnu packages virtualization)
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#:use-module (gnu packages web)
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#:use-module (gnu packages xml)
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#:use-module (gnu packages xorg)
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#:use-module (guix build-system glib-or-gtk)
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#:use-module (guix build-system gnu)
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#:use-module (guix build-system meson)
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#:use-module (guix build-system python)
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#:use-module (guix download)
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#:use-module (guix gexp)
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#:use-module (guix git-download)
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#:use-module ((guix licenses) #:prefix license:)
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#:use-module (guix packages)
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#:use-module (guix utils)
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#:use-module (ice-9 match)
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#:use-module (srfi srfi-1))
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(define (boot-guile-uri arch)
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"Return the URI for the bootstrap Guile tarball for ARCH."
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(cond ((string=? "armhf" arch)
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(string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
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arch "-linux"
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"/20150101/guile-2.0.11.tar.xz"))
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((string=? "aarch64" arch)
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(string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
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arch "-linux/20170217/guile-2.0.14.tar.xz"))
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(else
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(string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
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arch "-linux"
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"/20131110/guile-2.0.9.tar.xz"))))
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(define-public guix
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;; Latest version of Guix, which may or may not correspond to a release.
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;; Note: the 'update-guix-package.scm' script expects this definition to
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;; start precisely like this.
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(let ((version "1.0.1")
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(commit "41b4b713f4892918a9a1950acdd89f33b977d143")
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(revision 10))
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(package
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(name "guix")
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(version (if (zero? revision)
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version
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(string-append version "-"
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(number->string revision)
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"." (string-take commit 7))))
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://git.savannah.gnu.org/r/guix.git")
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(commit commit)))
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(sha256
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(base32
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"08sblj4xy78va6zlxmxdq2id58pjr8rjqxxycd77hiacsqbjh9g6"))
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(file-name (string-append "guix-" version "-checkout"))))
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(build-system gnu-build-system)
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(arguments
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`(#:configure-flags (list
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"--localstatedir=/var"
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"--sysconfdir=/etc"
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(string-append "--with-bash-completion-dir="
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(assoc-ref %outputs "out")
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"/etc/bash_completion.d")
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;; Set 'DOT_USER_PROGRAM' to the empty string so
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;; we don't keep a reference to Graphviz, whose
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;; closure is pretty big (too big for the Guix
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;; system installation image.)
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"ac_cv_path_DOT_USER_PROGRAM=dot"
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;; To avoid problems with the length of shebangs,
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;; choose a fixed-width and short directory name
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;; for tests.
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"ac_cv_guix_test_root=/tmp/guix-tests")
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#:parallel-tests? #f ;work around <http://bugs.gnu.org/21097>
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#:modules ((guix build gnu-build-system)
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(guix build utils)
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(srfi srfi-26)
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(ice-9 popen)
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(ice-9 rdelim))
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#:phases (modify-phases %standard-phases
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(replace 'bootstrap
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(lambda _
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;; Make sure 'msgmerge' can modify the PO files.
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(for-each (lambda (po)
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(chmod po #o666))
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(find-files "." "\\.po$"))
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(patch-shebang "build-aux/git-version-gen")
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(call-with-output-file ".tarball-version"
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(lambda (port)
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(display ,version port)))
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(invoke "sh" "bootstrap")))
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(add-before 'check 'copy-bootstrap-guile
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(lambda* (#:key system inputs #:allow-other-keys)
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;; Copy the bootstrap guile tarball in the store used
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;; by the test suite.
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(define (intern file recursive?)
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(let ((base (strip-store-file-name file)))
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;; Note: don't use 'guix download' here because we
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;; need to set the 'recursive?' argument.
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(invoke "./test-env" "guile" "-c"
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(object->string
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`(begin
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(use-modules (guix))
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(with-store store
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(add-to-store store ,base ,recursive?
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"sha256" ,file)))))))
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(intern (assoc-ref inputs "boot-guile") #f)
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;; On x86_64 some tests need the i686 Guile.
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,@(if (and (not (%current-target-system))
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(string=? (%current-system)
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"x86_64-linux"))
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'((intern (assoc-ref inputs "boot-guile/i686") #f))
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'())
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;; Copy the bootstrap executables.
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(for-each (lambda (input)
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(intern (assoc-ref inputs input) #t))
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'("bootstrap/bash" "bootstrap/mkdir"
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"bootstrap/tar" "bootstrap/xz"))
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#t))
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(add-after 'unpack 'disable-failing-tests
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;; XXX FIXME: These tests fail within the build container.
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(lambda _
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(substitute* "tests/syscalls.scm"
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(("^\\(test-(assert|equal) \"(clone|setns|pivot-root)\"" all)
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(string-append "(test-skip 1)\n" all)))
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(substitute* "tests/containers.scm"
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(("^\\(test-(assert|equal)" all)
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(string-append "(test-skip 1)\n" all)))
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(when (file-exists? "tests/guix-environment-container.sh")
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(substitute* "tests/guix-environment-container.sh"
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(("guix environment --version")
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"exit 77\n")))
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#t))
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(add-before 'check 'set-SHELL
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(lambda _
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;; 'guix environment' tests rely on 'SHELL' having a
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;; correct value, so set it.
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(setenv "SHELL" (which "sh"))
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#t))
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(add-after 'install 'wrap-program
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(lambda* (#:key inputs outputs #:allow-other-keys)
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;; Make sure the 'guix' command finds GnuTLS,
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;; Guile-JSON, and Guile-Git automatically.
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(let* ((out (assoc-ref outputs "out"))
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(guile (assoc-ref inputs "guile"))
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(gcrypt (assoc-ref inputs "guile-gcrypt"))
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(json (assoc-ref inputs "guile-json"))
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(sqlite (assoc-ref inputs "guile-sqlite3"))
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(git (assoc-ref inputs "guile-git"))
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(bs (assoc-ref inputs
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"guile-bytestructures"))
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(ssh (assoc-ref inputs "guile-ssh"))
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(gnutls (assoc-ref inputs "gnutls"))
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(locales (assoc-ref inputs "glibc-utf8-locales"))
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(deps (list gcrypt json sqlite gnutls
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git bs ssh))
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(effective
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(read-line
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(open-pipe* OPEN_READ
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(string-append guile "/bin/guile")
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"-c" "(display (effective-version))")))
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(path (string-join
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(map (cut string-append <>
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"/share/guile/site/"
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effective)
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(delete #f deps))
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":"))
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(gopath (string-join
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(map (cut string-append <>
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"/lib/guile/" effective
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"/site-ccache")
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(delete #f deps))
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":"))
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(locpath (string-append locales "/lib/locale")))
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(wrap-program (string-append out "/bin/guix")
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`("GUILE_LOAD_PATH" ":" prefix (,path))
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`("GUILE_LOAD_COMPILED_PATH" ":" prefix (,gopath))
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`("GUIX_LOCPATH" ":" suffix (,locpath)))
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#t))))))
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(native-inputs `(("pkg-config" ,pkg-config)
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;; XXX: Keep the development inputs here even though
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;; they're unnecessary, just so that 'guix environment
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;; guix' always contains them.
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("autoconf" ,autoconf-wrapper)
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("automake" ,automake)
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("gettext" ,gettext-minimal)
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("texinfo" ,texinfo)
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("graphviz" ,graphviz)
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("help2man" ,help2man)
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("po4a" ,po4a)))
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(inputs
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`(("bzip2" ,bzip2)
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("gzip" ,gzip)
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("zlib" ,zlib) ;for 'guix publish'
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("lzlib" ,lzlib) ;for 'guix publish' and 'guix substitute'
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("sqlite" ,sqlite)
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("libgcrypt" ,libgcrypt)
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("guile" ,guile-2.2)
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;; Some of the tests use "unshare" when it is available.
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("util-linux" ,util-linux)
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;; Many tests rely on the 'guile-bootstrap' package, which is why we
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;; have it here.
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("boot-guile" ,(bootstrap-guile-origin (%current-system)))
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,@(if (and (not (%current-target-system))
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(string=? (%current-system) "x86_64-linux"))
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`(("boot-guile/i686" ,(bootstrap-guile-origin "i686-linux")))
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'())
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;; Tests also rely on these bootstrap executables.
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("bootstrap/bash" ,(bootstrap-executable "bash" (%current-system)))
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("bootstrap/mkdir" ,(bootstrap-executable "mkdir" (%current-system)))
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("bootstrap/tar" ,(bootstrap-executable "tar" (%current-system)))
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("bootstrap/xz" ,(bootstrap-executable "xz" (%current-system)))
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("glibc-utf8-locales" ,glibc-utf8-locales)))
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(propagated-inputs
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`(("gnutls" ,gnutls)
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("guile-gcrypt" ,guile-gcrypt)
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("guile-json" ,guile-json-3)
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("guile-sqlite3" ,guile-sqlite3)
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("guile-ssh" ,guile-ssh)
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("guile-git" ,guile-git)))
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(home-page "https://www.gnu.org/software/guix/")
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(synopsis "Functional package manager for installed software packages and versions")
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(description
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"GNU Guix is a functional package manager for the GNU system, and is
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also a distribution thereof. It includes a virtual machine image. Besides
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the usual package management features, it also supports transactional
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upgrades and roll-backs, per-user profiles, and much more. It is based on
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the Nix package manager.")
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(license license:gpl3+)
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(properties '((ftp-server . "alpha.gnu.org"))))))
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(define-public guix-daemon
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;; This package is for internal consumption: it allows us to quickly build
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;; the 'guix-daemon' program and use that in (guix self), used by 'guix
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;; pull'.
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(package
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(inherit guix)
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(properties `((hidden? . #t)))
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(name "guix-daemon")
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;; Use a minimum set of dependencies.
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(native-inputs
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(fold alist-delete (package-native-inputs guix)
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'("po4a" "graphviz" "help2man")))
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(inputs
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`(("gnutls" ,gnutls)
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("guile-git" ,guile-git)
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("guile-json" ,guile-json-3)
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("guile-gcrypt" ,guile-gcrypt)
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,@(fold alist-delete (package-inputs guix)
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'("boot-guile" "boot-guile/i686" "util-linux"))))
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|
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(propagated-inputs '())
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||
|
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(arguments
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(substitute-keyword-arguments (package-arguments guix)
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((#:configure-flags flags '())
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;; Pretend we have those libraries; we don't actually need them.
|
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`(append ,flags
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'("guix_cv_have_recent_guile_sqlite3=yes"
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"guix_cv_have_recent_guile_ssh=yes")))
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((#:tests? #f #f)
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#f)
|
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((#:phases phases '%standard-phases)
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`(modify-phases ,phases
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||
(add-after 'unpack 'change-default-guix
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||
(lambda _
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||
;; We need to tell 'guix-daemon' which 'guix' command to use.
|
||
;; Here we use a questionable hack where we hard-code root's
|
||
;; current guix, which could be wrong (XXX). Note that scripts
|
||
;; like 'guix perform-download' do not run as root so we assume
|
||
;; that they have access to /var/guix/profiles/per-user/root.
|
||
(substitute* "nix/libstore/globals.cc"
|
||
(("guixProgram = (.*)nixBinDir + \"/guix\"" _ before)
|
||
(string-append "guixProgram = " before
|
||
"/var/guix/profiles/per-user/root\
|
||
/current-guix/bin/guix")))
|
||
#t))
|
||
(replace 'build
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||
(lambda _
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||
(invoke "make" "nix/libstore/schema.sql.hh")
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||
(invoke "make" "-j" (number->string
|
||
(parallel-job-count))
|
||
"guix-daemon")))
|
||
(delete 'copy-bootstrap-guile)
|
||
(replace 'install
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||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(invoke "make" "install-binPROGRAMS")))
|
||
(delete 'wrap-program)))))))
|
||
|
||
(define-public guile2.0-guix
|
||
(deprecated-package "guile2.0-guix" guix))
|
||
|
||
(define-public guix-minimal
|
||
;; A version of Guix which is built with the minimal set of dependencies, as
|
||
;; outlined in the README "Requirements" section. Intended as a CI job, so
|
||
;; marked as hidden.
|
||
(hidden-package
|
||
(package
|
||
(inherit guix)
|
||
(name "guix-minimal")
|
||
(inputs
|
||
`(("guile" ,guile-2.2)
|
||
,@(alist-delete "guile" (package-inputs guix))))
|
||
(propagated-inputs
|
||
(fold alist-delete
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||
(package-propagated-inputs guix)
|
||
'("guile-ssh"))))))
|
||
|
||
(define (source-file? file stat)
|
||
"Return true if FILE is likely a source file, false if it is a typical
|
||
generated file."
|
||
(define (wrong-extension? file)
|
||
(or (string-suffix? "~" file)
|
||
(member (file-extension file)
|
||
'("o" "a" "lo" "so" "go"))))
|
||
|
||
(match (basename file)
|
||
((or ".git" "autom4te.cache" "configure" "Makefile" "Makefile.in" ".libs")
|
||
#f)
|
||
((? wrong-extension?)
|
||
#f)
|
||
(_
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||
#t)))
|
||
|
||
(define-public current-guix-package
|
||
;; This parameter allows callers to override the package that 'current-guix'
|
||
;; returns. This is useful when 'current-guix' cannot compute it by itself,
|
||
;; for instance because it's not running from a source code checkout.
|
||
(make-parameter #f))
|
||
|
||
(define-public current-guix
|
||
(let* ((repository-root (delay (canonicalize-path
|
||
(string-append (current-source-directory)
|
||
"/../.."))))
|
||
(select? (delay (or (git-predicate (force repository-root))
|
||
source-file?))))
|
||
(lambda ()
|
||
"Return a package representing Guix built from the current source tree.
|
||
This works by adding the current source tree to the store (after filtering it
|
||
out) and returning a package that uses that as its 'source'."
|
||
(or (current-guix-package)
|
||
(package
|
||
(inherit guix)
|
||
(version (string-append (package-version guix) "+"))
|
||
(source (local-file (force repository-root) "guix-current"
|
||
#:recursive? #t
|
||
#:select? (force select?))))))))
|
||
|
||
|
||
;;;
|
||
;;; Other tools.
|
||
;;;
|
||
|
||
(define-public nix
|
||
(package
|
||
(name "nix")
|
||
(version "2.0.4")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "http://nixos.org/releases/nix/nix-"
|
||
version "/nix-" version ".tar.xz"))
|
||
(sha256
|
||
(base32
|
||
"0ss9svxlh1pvrdmnqjvjyqjmbqmrdbyfarvbb14i9d4bggzl0r8n"))))
|
||
(build-system gnu-build-system)
|
||
(native-inputs `(("pkg-config" ,pkg-config)))
|
||
(inputs `(("curl" ,curl)
|
||
("bzip2" ,bzip2)
|
||
("libgc" ,libgc)
|
||
("libseccomp" ,libseccomp)
|
||
("libsodium" ,libsodium)
|
||
("openssl" ,openssl)
|
||
("sqlite" ,sqlite)
|
||
("xz" ,xz)))
|
||
(home-page "https://nixos.org/nix/")
|
||
(synopsis "The Nix package manager")
|
||
(description
|
||
"Nix is a purely functional package manager. This means that it treats
|
||
packages like values in purely functional programming languages such as
|
||
Haskell—they are built by functions that don't have side-effects, and they
|
||
never change after they have been built. Nix stores packages in the Nix
|
||
store, usually the directory /nix/store, where each package has its own unique
|
||
sub-directory.")
|
||
(license license:lgpl2.1+)))
|
||
|
||
(define-public stow
|
||
(package
|
||
(name "stow")
|
||
(version "2.3.1")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://gnu/stow/stow-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0jrxy12ywn7smdzdnvwzjw77l6knx6jkj2rckgykg1dpf6bdkm89"))))
|
||
(build-system gnu-build-system)
|
||
(inputs
|
||
`(("perl" ,perl)))
|
||
(native-inputs
|
||
`(("perl-test-simple" ,perl-test-simple)
|
||
("perl-test-output" ,perl-test-output)
|
||
("perl-capture-tiny" ,perl-capture-tiny)
|
||
("perl-io-stringy" ,perl-io-stringy)))
|
||
(home-page "https://www.gnu.org/software/stow/")
|
||
(synopsis "Managing installed software packages")
|
||
(description
|
||
"GNU Stow is a symlink manager. It generates symlinks to directories
|
||
of data and makes them appear to be merged into the same directory. It is
|
||
typically used for managing software packages installed from source, by
|
||
letting you install them apart in distinct directories and then create
|
||
symlinks to the files in a common directory such as /usr/local.")
|
||
(license license:gpl3+)))
|
||
|
||
(define-public rpm
|
||
(package
|
||
(name "rpm")
|
||
(version "4.14.2.1")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "http://ftp.rpm.org/releases/rpm-"
|
||
(version-major+minor version) ".x/rpm-"
|
||
version ".tar.bz2"))
|
||
(sha256
|
||
(base32
|
||
"1nmck2fq9h85fgs3zhh6w1avlw5y16cbz5khd459ry3jfd5w4f8i"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
'(#:configure-flags '("--with-external-db" ;use the system's bdb
|
||
"--enable-python"
|
||
"--without-lua")
|
||
#:phases (modify-phases %standard-phases
|
||
(add-before 'configure 'set-nss-library-path
|
||
(lambda* (#:key inputs #:allow-other-keys)
|
||
(let ((nss (assoc-ref inputs "nss")))
|
||
(setenv "LIBRARY_PATH"
|
||
(string-append (getenv "LIBRARY_PATH") ":"
|
||
nss "/lib/nss"))
|
||
#t))))))
|
||
(native-inputs
|
||
`(("pkg-config" ,pkg-config)))
|
||
(inputs
|
||
`(("python" ,python)
|
||
("xz" ,xz)
|
||
("bdb" ,bdb)
|
||
("popt" ,popt)
|
||
("nss" ,nss)
|
||
("nspr" ,nspr)
|
||
("libarchive" ,libarchive)
|
||
("file" ,file)
|
||
("bzip2" ,bzip2)
|
||
("zlib" ,zlib)
|
||
("cpio" ,cpio)))
|
||
(home-page "https://rpm.org/")
|
||
(synopsis "The RPM Package Manager")
|
||
(description
|
||
"The RPM Package Manager (RPM) is a command-line driven package
|
||
management system capable of installing, uninstalling, verifying, querying,
|
||
and updating computer software packages. Each software package consists of an
|
||
archive of files along with information about the package like its version, a
|
||
description. There is also a library permitting developers to manage such
|
||
transactions from C or Python.")
|
||
|
||
;; The whole is GPLv2+; librpm itself is dual-licensed LGPLv2+ | GPLv2+.
|
||
(license license:gpl2+)))
|
||
|
||
(define-public python-anaconda-client
|
||
(package
|
||
(name "python-anaconda-client")
|
||
(version "1.6.3")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/Anaconda-Platform/"
|
||
"anaconda-client/archive/" version ".tar.gz"))
|
||
(file-name (string-append name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1wv4wi6k5jz7rlwfgvgfdizv77x3cr1wa2aj0k1595g7fbhkjhz2"))))
|
||
(build-system python-build-system)
|
||
(propagated-inputs
|
||
`(("python-pyyaml" ,python-pyyaml)
|
||
("python-requests" ,python-requests)
|
||
("python-clyent" ,python-clyent)))
|
||
(native-inputs
|
||
`(("python-pytz" ,python-pytz)
|
||
("python-dateutil" ,python-dateutil)
|
||
("python-mock" ,python-mock)
|
||
("python-coverage" ,python-coverage)
|
||
("python-pillow" ,python-pillow)))
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
;; This is needed for some tests.
|
||
(add-before 'check 'set-up-home
|
||
(lambda* _ (setenv "HOME" "/tmp") #t))
|
||
(add-before 'check 'remove-network-tests
|
||
(lambda* _
|
||
;; Remove tests requiring a network connection
|
||
(let ((network-tests '("tests/test_upload.py"
|
||
"tests/test_authorizations.py"
|
||
"tests/test_login.py"
|
||
"tests/test_whoami.py"
|
||
"utils/notebook/tests/test_data_uri.py"
|
||
"utils/notebook/tests/test_base.py"
|
||
"utils/notebook/tests/test_downloader.py"
|
||
"inspect_package/tests/test_conda.py")))
|
||
(with-directory-excursion "binstar_client"
|
||
(for-each delete-file network-tests)))
|
||
#t)))))
|
||
(home-page "https://github.com/Anaconda-Platform/anaconda-client")
|
||
(synopsis "Anaconda Cloud command line client library")
|
||
(description
|
||
"Anaconda Cloud command line client library provides an interface to
|
||
Anaconda Cloud. Anaconda Cloud is useful for sharing packages, notebooks and
|
||
environments.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python2-anaconda-client
|
||
(package-with-python2 python-anaconda-client))
|
||
|
||
(define-public python-conda
|
||
(package
|
||
(name "python-conda")
|
||
(version "4.3.16")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/conda/conda/archive/"
|
||
version ".tar.gz"))
|
||
(file-name (string-append name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1jq8hyrc5npb5sf4vw6s6by4602yj8f79vzpbwdfgpkn02nfk1dv"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'build 'create-version-file
|
||
(lambda _
|
||
(with-output-to-file "conda/.version"
|
||
(lambda () (display ,version)))
|
||
#t))
|
||
(add-before 'check 'remove-failing-tests
|
||
(lambda _
|
||
;; These tests require internet/network access
|
||
(let ((network-tests '("test_cli.py"
|
||
"test_create.py"
|
||
"test_export.py"
|
||
"test_fetch.py"
|
||
"test_history.py"
|
||
"test_info.py"
|
||
"test_install.py"
|
||
"test_priority.py"
|
||
"conda_env/test_cli.py"
|
||
"conda_env/test_create.py"
|
||
"conda_env/specs/test_notebook.py"
|
||
"conda_env/utils/test_notebooks.py"
|
||
"core/test_index.py"
|
||
"core/test_repodata.py")))
|
||
(with-directory-excursion "tests"
|
||
(for-each delete-file network-tests)
|
||
|
||
;; FIXME: This test creates a file, then deletes it and tests
|
||
;; that the file was deleted. For some reason it fails when
|
||
;; building with guix, but does not when you run it in the
|
||
;; directory left when you build with the --keep-failed
|
||
;; option
|
||
(delete-file "gateways/disk/test_delete.py")
|
||
#t))))
|
||
(replace 'check
|
||
(lambda _
|
||
(setenv "HOME" "/tmp")
|
||
(invoke "py.test"))))))
|
||
(native-inputs
|
||
`(("python-cytoolz" ,python-cytoolz)
|
||
("python-ruamel.yaml" ,python-ruamel.yaml)
|
||
("python-requests" ,python-requests)
|
||
("python-pycosat" ,python-pycosat)
|
||
("python-pytest" ,python-pytest)
|
||
("python-responses" ,python-responses)
|
||
("python-pyyaml" ,python-pyyaml)
|
||
("python-anaconda-client" ,python-anaconda-client)))
|
||
(home-page "https://github.com/conda/conda")
|
||
(synopsis "Cross-platform, OS-agnostic, system-level binary package manager")
|
||
(description
|
||
"Conda is a cross-platform, Python-agnostic binary package manager. It
|
||
is the package manager used by Anaconda installations, but it may be used for
|
||
other systems as well. Conda makes environments first-class citizens, making
|
||
it easy to create independent environments even for C libraries. Conda is
|
||
written entirely in Python.
|
||
|
||
This package provides Conda as a library.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python2-conda
|
||
(let ((base (package-with-python2
|
||
(strip-python2-variant python-conda))))
|
||
(package (inherit base)
|
||
(native-inputs
|
||
`(("python2-enum34" ,python2-enum34)
|
||
,@(package-native-inputs base))))))
|
||
|
||
(define-public conda
|
||
(package (inherit python-conda)
|
||
(name "conda")
|
||
(arguments
|
||
(substitute-keyword-arguments (package-arguments python-conda)
|
||
((#:phases phases)
|
||
`(modify-phases ,phases
|
||
(replace 'build
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
;; This test fails when run before installation.
|
||
(delete-file "tests/test_activate.py")
|
||
|
||
;; Fix broken defaults
|
||
(substitute* "conda/base/context.py"
|
||
(("return sys.prefix")
|
||
(string-append "return \"" (assoc-ref outputs "out") "\""))
|
||
(("return (prefix_is_writable\\(self.root_prefix\\))" _ match)
|
||
(string-append "return False if self.root_prefix == self.conda_prefix else "
|
||
match)))
|
||
|
||
;; The util/setup-testing.py is used to build conda in
|
||
;; application form, rather than the default, library form.
|
||
;; With this, we are able to run commands like `conda --help`
|
||
;; directly on the command line
|
||
(invoke "python" "utils/setup-testing.py" "build_py")))
|
||
(replace 'install
|
||
(lambda* (#:key inputs outputs #:allow-other-keys)
|
||
(let* ((out (assoc-ref outputs "out"))
|
||
(target (string-append out "/lib/python"
|
||
(python-version
|
||
(assoc-ref inputs "python"))
|
||
"/site-packages/")))
|
||
;; The installer aborts if the target directory is not on
|
||
;; PYTHONPATH.
|
||
(setenv "PYTHONPATH"
|
||
(string-append target ":" (getenv "PYTHONPATH")))
|
||
|
||
;; And it aborts if the directory doesn't exist.
|
||
(mkdir-p target)
|
||
(invoke "python" "utils/setup-testing.py" "install"
|
||
(string-append "--prefix=" out)))))
|
||
;; The "activate" and "deactivate" scripts don't need wrapping.
|
||
;; They also break when they are renamed.
|
||
(add-after 'wrap 'undo-wrap
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(with-directory-excursion (string-append (assoc-ref outputs "out") "/bin/")
|
||
(delete-file "deactivate")
|
||
(rename-file ".deactivate-real" "deactivate")
|
||
(delete-file "activate")
|
||
(rename-file ".activate-real" "activate")
|
||
#t)))))))
|
||
(description
|
||
"Conda is a cross-platform, Python-agnostic binary package manager. It
|
||
is the package manager used by Anaconda installations, but it may be used for
|
||
other systems as well. Conda makes environments first-class citizens, making
|
||
it easy to create independent environments even for C libraries. Conda is
|
||
written entirely in Python.")))
|
||
|
||
(define-public gwl
|
||
(package
|
||
(name "gwl")
|
||
(version "0.1.1")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://www.guixwl.org/releases/gwl-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"06pm967mq1wyggx7l0nfapw5s0k5qc5r9lawk2v3db868br779a7"))))
|
||
(build-system gnu-build-system)
|
||
(native-inputs
|
||
`(("autoconf" ,autoconf)
|
||
("automake" ,automake)
|
||
("pkg-config" ,pkg-config)))
|
||
(inputs
|
||
`(("guile" ,guile-2.2)))
|
||
(propagated-inputs
|
||
`(("guix" ,guix)
|
||
("guile-commonmark" ,guile-commonmark)))
|
||
(home-page "https://www.guixwl.org")
|
||
(synopsis "Workflow management extension for GNU Guix")
|
||
(description "This project provides two subcommands to GNU Guix and
|
||
introduces two record types that provide a workflow management extension built
|
||
on top of GNU Guix.")
|
||
;; The Scheme modules in guix/ and gnu/ are licensed GPL3+,
|
||
;; the web interface modules in gwl/ are licensed AGPL3+,
|
||
;; and the fonts included in this package are licensed OFL1.1.
|
||
(license (list license:gpl3+ license:agpl3+ license:silofl1.1))))
|
||
|
||
(define-public guix-jupyter
|
||
(package
|
||
(name "guix-jupyter")
|
||
(version "0.1.0")
|
||
(home-page "https://gitlab.inria.fr/guix-hpc/guix-kernel")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference (url home-page)
|
||
(commit (string-append "v" version))))
|
||
(sha256
|
||
(base32
|
||
"01z7jjkc7r7lj6637rcgpz40v8xqqyfp6871h94yvcnwm7zy9h1n"))
|
||
(file-name (string-append "guix-jupyter-" version "-checkout"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:modules ((srfi srfi-26)
|
||
(ice-9 match)
|
||
(ice-9 popen)
|
||
(ice-9 rdelim)
|
||
(guix build utils)
|
||
(guix build gnu-build-system))
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-after 'install 'sed-kernel-json
|
||
(lambda* (#:key inputs outputs #:allow-other-keys)
|
||
(let* ((out (assoc-ref outputs "out"))
|
||
(guix (assoc-ref inputs "guix"))
|
||
(guile (assoc-ref inputs "guile"))
|
||
(json (assoc-ref inputs "guile-json"))
|
||
(git (assoc-ref inputs "guile-git"))
|
||
(bs (assoc-ref inputs "guile-bytestructures"))
|
||
(s-zmq (assoc-ref inputs "guile-simple-zmq"))
|
||
(gcrypt (assoc-ref inputs "guile-gcrypt"))
|
||
(deps (list out s-zmq guix json git bs gcrypt))
|
||
(effective
|
||
(read-line
|
||
(open-pipe* OPEN_READ
|
||
(string-append guile "/bin/guile")
|
||
"-c" "(display (effective-version))")))
|
||
(path (map (cut string-append "-L\", \"" <>
|
||
"/share/guile/site/"
|
||
effective)
|
||
deps))
|
||
(gopath (map (cut string-append "-C\", \"" <>
|
||
"/lib/guile/" effective
|
||
"/site-ccache")
|
||
deps))
|
||
(kernel-dir (string-append out "/share/jupyter/kernels/guix/")))
|
||
(substitute* (string-append kernel-dir "kernel.json")
|
||
(("-s")
|
||
(string-join
|
||
(list (string-join path "\",\n\t\t\"")
|
||
(string-join gopath "\",\n\t\t\"")
|
||
"-s")
|
||
"\",\n\t\t\""))
|
||
(("guix-jupyter-kernel.scm")
|
||
(string-append out "/share/guile/site/2.2/"
|
||
"guix-jupyter-kernel.scm")))
|
||
#t))))))
|
||
(native-inputs
|
||
`(("autoconf" ,autoconf)
|
||
("automake" ,automake)
|
||
("pkg-config" ,pkg-config)
|
||
|
||
;; For testing.
|
||
("jupyter" ,jupyter)
|
||
("python-ipython" ,python-ipython)
|
||
("python-ipykernel" ,python-ipykernel)))
|
||
(inputs
|
||
`(("guix" ,guix)
|
||
("guile" ,guile-2.2)))
|
||
(propagated-inputs
|
||
`(("guile-json" ,guile-json-3)
|
||
("guile-simple-zmq" ,guile-simple-zmq)
|
||
("guile-gcrypt" ,guile-gcrypt)))
|
||
(synopsis "Guix kernel for Jupyter")
|
||
(description
|
||
"Guix-Jupyter is a Jupyter kernel. It allows you to annotate notebooks
|
||
with information about their software dependencies, such that code is executed
|
||
in the right software environment. Guix-Jupyter spawns the actual kernels
|
||
such as @code{python-ipykernel} on behalf of the notebook user and runs them
|
||
in an isolated environment, in separate namespaces.")
|
||
(license license:gpl3+)))
|
||
|
||
(define-public gcab
|
||
(package
|
||
(name "gcab")
|
||
(version "1.2")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://gnome/sources/gcab/"
|
||
version "/gcab-" version ".tar.xz"))
|
||
(sha256
|
||
(base32
|
||
"038h5kk41si2hc9d9169rrlvp8xgsxq27kri7hv2vr39gvz9cbas"))))
|
||
(build-system meson-build-system)
|
||
(native-inputs
|
||
`(("glib:bin" ,glib "bin") ; for glib-mkenums
|
||
("intltool" ,intltool)
|
||
("pkg-config" ,pkg-config)
|
||
("vala" ,vala)))
|
||
(inputs
|
||
`(("glib" ,glib)
|
||
("zlib" ,zlib)))
|
||
(arguments
|
||
`(#:configure-flags
|
||
;; XXX This ‘documentation’ is for developers, and fails informatively:
|
||
;; Error in gtkdoc helper script: 'gtkdoc-mkhtml' failed with status 5
|
||
(list "-Ddocs=false"
|
||
"-Dintrospection=false")))
|
||
(home-page "https://wiki.gnome.org/msitools") ; no dedicated home page
|
||
(synopsis "Microsoft Cabinet file manipulation library")
|
||
(description
|
||
"The libgcab library provides GObject functions to read, write, and modify
|
||
Microsoft cabinet (.@dfn{CAB}) files.")
|
||
(license (list license:gpl2+ ; tests/testsuite.at
|
||
license:lgpl2.1+)))) ; the rest
|
||
|
||
(define-public msitools
|
||
(package
|
||
(name "msitools")
|
||
(version "0.99")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://gnome/sources/msitools/"
|
||
version "/msitools-" version ".tar.xz"))
|
||
(sha256
|
||
(base32
|
||
"0d9nidn5zc81bc30w119933rn2g87mrsqyqkndg20srkbsd96xfl"))))
|
||
(build-system gnu-build-system)
|
||
(native-inputs
|
||
`(("bison" ,bison)
|
||
("pkg-config" ,pkg-config)))
|
||
(inputs
|
||
`(("gcab" ,gcab)
|
||
("glib" ,glib)
|
||
("libgsf" ,libgsf)
|
||
("libxml2" ,libxml2)
|
||
("uuid" ,util-linux)))
|
||
(home-page "https://wiki.gnome.org/msitools")
|
||
(synopsis "Windows Installer file manipulation tool")
|
||
(description
|
||
"msitools is a collection of command-line tools to inspect, extract, build,
|
||
and sign Windows@tie{}Installer (.@dfn{MSI}) files. It aims to be a solution
|
||
for packaging and deployment of cross-compiled Windows applications.")
|
||
(license license:lgpl2.1+)))
|
||
|
||
(define-public libostree
|
||
(package
|
||
(name "libostree")
|
||
(version "2019.3")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"https://github.com/ostreedev/ostree/releases/download/v"
|
||
(version-major+minor version) "/libostree-" version ".tar.xz"))
|
||
(sha256
|
||
(base32
|
||
"1r07yqbc9iiq0lzv1pryppd35fv695ym8r040msbfc93pmiy77y0"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
'(#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'check 'pre-check
|
||
(lambda _
|
||
;; Don't try to use the non-existing '/var/tmp' as test
|
||
;; directory.
|
||
(setenv "TEST_TMPDIR" (getenv "TMPDIR"))
|
||
#t)))
|
||
;; XXX: fails with:
|
||
;; tap-driver.sh: missing test plan
|
||
;; tap-driver.sh: internal error getting exit status
|
||
;; tap-driver.sh: fatal: I/O or internal error
|
||
#:tests? #f))
|
||
(native-inputs
|
||
`(("attr" ,attr) ; for tests
|
||
("bison" ,bison)
|
||
("glib:bin" ,glib "bin") ; for 'glib-mkenums'
|
||
("gobject-introspection" ,gobject-introspection)
|
||
("pkg-config" ,pkg-config)
|
||
("xsltproc" ,libxslt)))
|
||
(inputs
|
||
`(("avahi" ,avahi)
|
||
("docbook-xml" ,docbook-xml-4.2)
|
||
("docbook-xsl" ,docbook-xsl)
|
||
("e2fsprogs" ,e2fsprogs)
|
||
("fuse" ,fuse)
|
||
("glib" ,glib)
|
||
("gpgme" ,gpgme)
|
||
("libarchive" ,libarchive)
|
||
("libsoup" ,libsoup)
|
||
("util-linux" ,util-linux)))
|
||
(home-page "https://ostree.readthedocs.io/en/latest/")
|
||
(synopsis "Operating system and container binary deployment and upgrades")
|
||
(description
|
||
"@code{libostree} is both a shared library and suite of command line
|
||
tools that combines a \"git-like\" model for committing and downloading
|
||
bootable file system trees, along with a layer for deploying them and managing
|
||
the boot loader configuration.")
|
||
(license license:lgpl2.0+)))
|
||
|
||
(define-public flatpak
|
||
(package
|
||
(name "flatpak")
|
||
(version "1.4.3")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/flatpak/flatpak/releases/download/"
|
||
version "/flatpak-" version ".tar.xz"))
|
||
(sha256
|
||
(base32
|
||
"11bfxmv8pxlb5x0lb2rsl45615fzfvq5r6wldf0l6ab2ngryd7i7"))))
|
||
|
||
;; Wrap 'flatpak' so that GIO_EXTRA_MODULES is set, thereby allowing GIO to
|
||
;; find the TLS backend in glib-networking.
|
||
(build-system glib-or-gtk-build-system)
|
||
|
||
(arguments
|
||
'(#:tests? #f ;; Tests fail due to trying to create files where it can't.
|
||
#:configure-flags (list
|
||
"--enable-documentation=no" ;; FIXME
|
||
"--enable-system-helper=no"
|
||
"--localstatedir=/var"
|
||
(string-append "--with-system-bubblewrap="
|
||
(assoc-ref %build-inputs "bubblewrap")
|
||
"/bin/bwrap"))))
|
||
(native-inputs `(("bison" ,bison)
|
||
("gettext" ,gnu-gettext)
|
||
("glib:bin" ,glib "bin") ; for glib-mkenums + gdbus-codegen
|
||
("gobject-introspection" ,gobject-introspection)
|
||
("libcap" ,libcap)
|
||
("pkg-config" ,pkg-config)))
|
||
(propagated-inputs `(("glib-networking" ,glib-networking)
|
||
("gnupg" ,gnupg)
|
||
("gsettings-desktop-schemas"
|
||
,gsettings-desktop-schemas)))
|
||
(inputs `(("appstream-glib" ,appstream-glib)
|
||
("bubblewrap" ,bubblewrap)
|
||
("dconf" ,dconf)
|
||
("fuse" ,fuse)
|
||
("gdk-pixbuf" ,gdk-pixbuf)
|
||
("gpgme" ,gpgme)
|
||
("json-glib" ,json-glib)
|
||
("libarchive" ,libarchive)
|
||
("libostree" ,libostree)
|
||
("libseccomp" ,libseccomp)
|
||
("libsoup" ,libsoup)
|
||
("libxau" ,libxau)
|
||
("libxml2" ,libxml2)
|
||
("util-linux" ,util-linux)))
|
||
(home-page "https://flatpak.org")
|
||
(synopsis "System for building, distributing, and running sandboxed desktop
|
||
applications")
|
||
(description "Flatpak is a system for building, distributing, and running
|
||
sandboxed desktop applications on GNU/Linux.")
|
||
(license license:lgpl2.1+)))
|