guix/gnu/packages
Ricardo Wurmus 1bf630660b
gnu: r-rsubread: Update to 2.2.6.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.2.6.
2020-08-20 21:25:33 +02:00
..
aux-files gnu: linux-libre: Fix typo in the configuration for 5.7 on x86_64. 2020-08-10 11:32:05 -04:00
patches gnu: unknown-horizons: Fix build with python@3.8 and python-pytest@5. 2020-08-19 23:02:26 +02:00
abduco.scm
abiword.scm
accessibility.scm gnu: Add brltty. 2020-08-18 23:26:16 +02:00
acct.scm
acl.scm
ada.scm
admin.scm gnu: nnn: Update to 3.4. 2020-08-18 23:54:55 +02:00
adns.scm
agda.scm gnu: agda: Adjust for using shared libraries. 2020-08-19 23:58:47 -04:00
aidc.scm gnu: Add zxing-cpp. 2020-08-18 22:56:40 +02:00
algebra.scm gnu: python-fpylll: Update to 0.5.2. 2020-08-20 19:27:10 +02:00
android.scm gnu: android-liblog: Install headers. 2020-08-11 13:12:28 +02:00
animation.scm gnu: pencil2d: Update to 0.6.5. 2020-08-09 16:41:16 +02:00
anthy.scm
antivirus.scm
apl.scm
apr.scm
arcan.scm
aspell.scm
assembly.scm
astronomy.scm gnu: cfitsio: Update to 3.49. 2020-08-18 05:38:38 +02:00
attr.scm
audio.scm gnu: libopenmpt: Update to 0.5.1. 2020-08-19 20:03:56 +02:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm
avahi.scm
avr.scm
axoloti.scm
backup.scm gnu: burp: Update to 2.3.32. 2020-08-11 22:26:14 +02:00
base.scm gnu: binutils-gold: build with canonical gcc:lib. 2020-08-06 09:04:13 +03:00
bash.scm
batik.scm
bdw-gc.scm
benchmark.scm gnu: fio: Update to 3.22. 2020-08-18 23:54:55 +02:00
bioconductor.scm gnu: r-rsubread: Update to 2.2.6. 2020-08-20 21:25:33 +02:00
bioinformatics.scm gnu: pigx-chipseq: Update to 0.0.43. 2020-08-19 12:12:42 +02:00
bison.scm gnu: bison: Mention yacc in the description. 2020-07-30 02:53:28 +02:00
bittorrent.scm gnu: libtorrent-rasterbar: Update to 1.2.8. 2020-08-11 16:25:04 +02:00
boost.scm
bootloaders.scm
bootstrap.scm
build-tools.scm
busybox.scm
c.scm
calcurse.scm
calendar.scm gnu: Add confclerk. 2020-08-05 13:10:14 +03:00
ccache.scm
cdrom.scm
cedille.scm
certs.scm
check.scm gnu: Add pedansee. 2020-08-18 23:11:15 +02:00
chemistry.scm
chez.scm
chicken.scm
chromium.scm gnu: ungoogled-chromium: Update to 84.0.4147.125-0.57244cd. 2020-08-19 00:24:22 +02:00
ci.scm gnu: cuirass: Update to 0.0.1-42.d332955. 2020-08-02 19:19:56 +02:00
cinnamon.scm
clojure.scm
cluster.scm
cmake.scm
cobol.scm
code.scm
commencement.scm
compression.scm gnu: innoextract: Update to 1.9. 2020-08-11 16:25:05 +02:00
compton.scm
configuration-management.scm gnu: Add chezmoi. 2020-08-09 17:22:26 +03:00
conky.scm
connman.scm
convmv.scm
cook.scm
coq.scm
cpio.scm
cpp.scm gnu: xtl: Update to 0.6.16. 2020-08-20 05:14:15 +02:00
cppi.scm
cran.scm gnu: r-stanheaders: Update to 2.21.0-6. 2020-08-20 19:32:24 +02:00
crates-io.scm gnu: rust-bytemuck-1: Update to 1.3.1. 2020-08-19 11:24:39 +03:00
cross-base.scm
crypto.scm
cryptsetup.scm
cups.scm
curl.scm
cvassistant.scm
cybersecurity.scm
cyrus-sasl.scm
databases.scm gnu: virtuoso-use: Remove static libraries. 2020-08-19 18:08:00 +02:00
datamash.scm
datastructures.scm gnu: sparsehash: Update to 2.0.4. 2020-08-15 22:09:07 +02:00
dav.scm
dbm.scm
dc.scm
debian.scm
debug.scm gnu: Add Remake. 2020-08-01 14:00:47 -05:00
dejagnu.scm
dhall.scm
dico.scm
dictionaries.scm gnu: grammalecte: Update to 1.12.0. 2020-08-20 12:52:04 +02:00
diffoscope.scm
digest.scm gnu: Update xxhash to 0.8.0. 2020-08-01 09:00:44 +02:00
direct-connect.scm
disk.scm gnu: Add hddtemp. 2020-08-06 12:28:29 +02:00
display-managers.scm
distributed.scm
django.scm
djvu.scm
dlang.scm
dns.scm gnu: bind: Update to 9.16.6 [multiple CVE fixes]. 2020-08-20 21:17:06 +02:00
docbook.scm
docker.scm
documentation.scm gnu: Add latex2html. 2020-08-18 23:26:14 +02:00
drones.scm
dunst.scm
dvtm.scm
easyrpg.scm gnu: easyrpg-player: Update to 0.6.2.1. 2020-08-03 16:43:28 +03:00
ebook.scm
ed.scm
education.scm gnu: fet: Update to 5.46.0. 2020-08-17 15:23:04 +02:00
efi.scm
electronics.scm
elf.scm
elixir.scm gnu: elixir: Remove unused input. 2020-07-30 18:18:11 +02:00
elm.scm
emacs-xyz.scm gnu: emacs-browse-at-remote: Update to 0.14.0. 2020-08-20 19:27:32 +03:00
emacs.scm gnu: emacs: Ignore empty XIM styles. 2020-08-03 12:26:02 +02:00
embedded.scm
emulators.scm gnu: mame: Update to 0.223. 2020-08-17 15:05:20 +02:00
enchant.scm gnu: nuspell: Update to 3.1.2. 2020-08-19 20:44:18 +02:00
engineering.scm gnu: libfive: Fix build. 2020-08-19 11:05:05 +03:00
enlightenment.scm gnu: terminology: Update to 1.8.1. 2020-08-12 14:21:41 +03:00
entr.scm
erlang.scm
fabric-management.scm
fcitx.scm gnu: Add presage. 2020-08-18 22:54:06 +02:00
figlet.scm
file-systems.scm gnu: Add dbxfs. 2020-08-16 11:43:34 +03:00
file.scm
finance.scm gnu: python-stdnum: Update to 1.14. 2020-08-16 00:14:16 +02:00
firmware.scm gnu: seabios: Update to 1.14.0. 2020-08-15 22:09:06 +02:00
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm gnu: font-fantasque-sans: Fix build. 2020-08-19 03:02:04 +02:00
fontutils.scm gnu: woff2: Update package definition. 2020-08-19 02:53:45 +02:00
forth.scm
fpga.scm gnu: gtkwave: Update to 3.3.106. 2020-08-16 03:47:14 +02:00
freedesktop.scm gnu: Add malcontent. 2020-08-18 22:53:57 +02:00
freeipmi.scm
fribidi.scm
ftp.scm gnu: lftp: Update to 4.9.2. 2020-08-16 03:47:13 +02:00
fvwm.scm gnu: fvwm: Use make-desktop-entry-file. 2020-08-19 16:31:59 +03:00
game-development.scm gnu: ode: Update to 0.16.2. 2020-08-06 16:55:12 +02:00
games.scm gnu: unknown-horizons: Fix build with python@3.8 and python-pytest@5. 2020-08-19 23:02:26 +02:00
gawk.scm
gcal.scm
gcc.scm
gd.scm
gdb.scm
genealogy.scm
genimage.scm
geo.scm gnu: postgis: Update to 3.0.2. 2020-08-18 23:54:55 +02:00
gettext.scm
ghostscript.scm
gimp.scm gnu: Add mrg. 2020-08-18 23:11:15 +02:00
gkrellm.scm
gl.scm
glib.scm gnu: Add glibmm-2.64. 2020-08-18 23:10:05 +02:00
gnome-xyz.scm gnu: gnome-shell-extension-dash-to-panel: Update to 38. 2020-08-16 03:49:05 +02:00
gnome.scm gnu: geocode-glib: Update to 3.26.2. 2020-08-19 20:44:18 +02:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm gnu: libmicrohttpd: Update to 0.9.71. 2020-08-16 09:43:29 +02:00
gnupg.scm
gnustep.scm gnu: wmnd: Update to 0.4.18. 2020-08-04 12:04:32 -04:00
gnuzilla.scm gnu: icedove: Update to 68.11.0. 2020-08-14 17:53:07 +02:00
gobby.scm
golang.scm gnu: go-github-com-muesli-reflow-wordwrap: Declare source file-name. 2020-08-15 23:29:18 +03:00
gperf.scm
gpodder.scm
gps.scm gnu: gpsd: Update to 3.21. 2020-08-16 23:36:27 +02:00
graph.scm gnu: python-igraph: Update to 0.8.2. 2020-08-18 05:38:39 +02:00
graphics.scm gnu: blender: Add colour management support. 2020-08-20 06:20:11 +02:00
graphviz.scm
groff.scm gnu: roffit: Update to 0.12. 2020-08-05 11:34:35 +02:00
groovy.scm
gsasl.scm
gstreamer.scm gnu: ccextractor: Fix build. 2020-08-20 13:53:01 +02:00
gtk.scm gnu: graphene: Update package definition. 2020-08-19 11:14:10 +02:00
guile-wm.scm
guile-xyz.scm gnu: guile2.2-gi: Fix build. 2020-08-18 13:25:15 +02:00
guile.scm gnu: guile-zlib: Declare a source file-name. 2020-08-06 16:25:19 +03:00
gv.scm
gxmessage.scm
hardware.scm
haskell-apps.scm gnu: ghcid: Update to 0.8.7. 2020-08-18 05:38:39 +02:00
haskell-check.scm gnu: ghc-hspec: Add "doc" output. 2020-08-13 16:44:56 +02:00
haskell-crypto.scm gnu: ghc-cryptonite: Add "doc" output. 2020-08-13 16:44:56 +02:00
haskell-web.scm gnu: ghc-http: Prevent embedding of spurious references. 2020-08-13 16:44:58 +02:00
haskell-xyz.scm gnu: ghc-regex-pcre: Set '#:extra-directories'. 2020-08-19 23:58:47 -04:00
haskell.scm gnu: ghc-8.6: Remove unnecessary references. 2020-08-13 16:44:56 +02:00
heads.scm
hexedit.scm
hugs.scm
hurd.scm
hyperledger.scm
i2p.scm
ibus.scm
icu4c.scm
idris.scm
idutils.scm
image-processing.scm gnu: Add opencolorio. 2020-08-20 06:20:10 +02:00
image-viewers.scm
image.scm gnu: Add openjpeg-data. 2020-08-18 23:10:04 +02:00
imagemagick.scm
inklingreader.scm
inkscape.scm
installers.scm
ipfs.scm gnu: go-ipfs: Update to 0.6.0. 2020-08-09 21:38:19 +02:00
irc.scm gnu: weechat: Update to 2.9. 2020-08-16 23:36:27 +02:00
iso-codes.scm
jami.scm gnu: jami: Always remove contrib tarballs from the sources of Jami. 2020-08-06 00:01:50 -04:00
java-compression.scm gnu: java-snappy: Update to 1.1.7.5. 2020-08-19 00:21:41 +02:00
java-graphics.scm
java-maths.scm
java.scm
javascript.scm
jemalloc.scm
jose.scm
jrnl.scm
julia-xyz.scm
julia.scm
jupyter.scm
kawa.scm
kde-frameworks.scm
kde-internet.scm
kde-multimedia.scm
kde-pim.scm gnu: akonadi: Update home-page. 2020-08-19 16:08:46 +03:00
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm gnu: Add kxstitch. 2020-08-16 10:42:54 +01:00
kde.scm gnu: kdenlive: Update to 20.04.1. 2020-08-11 11:51:36 +02:00
kerberos.scm
key-mon.scm
kodi.scm
language.scm gnu: Add liblouisutdml. 2020-08-18 23:25:58 +02:00
ld-wrapper.in
lean.scm
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm gnu: usbmuxd: Update to 1.1.1. 2020-08-14 20:21:49 -04:00
license.scm
lighting.scm gnu: ola: Build with protobuf@3. 2020-08-16 12:16:07 +02:00
linphone.scm
linux.scm gnu: linux-libre: Update to 5.7.16. 2020-08-19 19:35:03 -04:00
lirc.scm
lisp-xyz.scm gnu: Add hu.dwim.defclass-star. 2020-08-07 15:58:16 +02:00
lisp.scm gnu: txr: Update to 242. 2020-08-18 15:05:29 +02:00
llvm.scm gnu: clang-runtime-3.5: Fix build. 2020-08-11 17:54:49 +02:00
logging.scm
logo.scm
lolcode.scm
lout.scm
lsof.scm
lua.scm
lxde.scm
lxqt.scm gnu: lxqt-panel: Show icons in menus. 2020-08-13 10:42:02 +02:00
m4.scm
machine-learning.scm gnu: dlib: Install shared library. 2020-08-13 11:29:36 +03:00
magic-wormhole.scm
mail.scm gnu: mailutils: Update to 3.10. 2020-08-20 05:14:15 +02:00
make-bootstrap.scm
man.scm gnu: libpipeline: Update to 1.5.3. 2020-08-19 04:24:25 +02:00
markup.scm
marst.scm
mastodon.scm
mate.scm gnu: mate-power-manager: Update to 1.24.2. 2020-08-20 06:16:44 +02:00
maths.scm gnu: wxmaxima: Update to 20.06.6. 2020-08-16 17:30:55 -04:00
matrix.scm
maven-parent-pom.scm
maven.scm
mc.scm
mcrypt.scm
medical.scm
mercury.scm
mes.scm
messaging.scm gnu: bitlbee-discord: Fix typo in description. 2020-08-16 09:44:37 +03:00
microcom.scm
mingw.scm
moe.scm
monitoring.scm
mono.scm
moreutils.scm
motti.scm
mp3.scm
mpd.scm
mpi.scm
mtools.scm
multiprecision.scm
music.scm gnu: musescore: Update to 3.5. 2020-08-12 18:51:06 +02:00
musl.scm gnu: musl: Update to 1.2.1. 2020-08-11 16:25:06 +02:00
nano.scm gnu: nano: Update to 5.1. 2020-08-12 12:45:28 +02:00
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: wireshark: Update to 3.2.6. 2020-08-20 06:16:46 +02:00
nfs.scm
nickle.scm
nim.scm
ninja.scm
node-xyz.scm
node.scm
noweb.scm
nss.scm
ntp.scm gnu: chrony: Update to 3.5.1 [fixes CVE-2020-14367]. 2020-08-20 12:53:06 +02:00
nutrition.scm
nvi.scm
ocaml.scm gnu: opam: Fix tests. 2020-07-30 18:18:12 +02:00
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm
opencog.scm
openkinect.scm
openldap.scm
openpgp.scm
openstack.scm
orpheus.scm
ots.scm
package-management.scm gnu: libostree: Update to 2020.5. 2020-08-20 06:16:45 +02:00
pantheon.scm
parallel.scm
password-utils.scm gnu: keepassxc: Update to 2.6.1. 2020-08-20 16:07:51 +02:00
patchutils.scm
pciutils.scm
pcre.scm
pdf.scm gnu: stapler: Update to 1.0.0. 2020-08-05 12:39:02 -04:00
pem.scm
pep.scm
perl-check.scm
perl-compression.scm
perl-web.scm
perl.scm
perl6.scm
phabricator.scm
photo.scm gnu: Add entangle. 2020-08-16 09:16:53 +02:00
php.scm gnu: php: Update to 7.4.9. 2020-08-13 16:09:40 +02:00
pkg-config.scm
plotutils.scm gnu: asymptote: Update to 2.67. 2020-08-06 16:48:40 +02:00
poedit.scm
polkit.scm
popt.scm
presentation.scm
pretty-print.scm
printers.scm
profiling.scm
prolog.scm gnu: swi-prolog: Update to 8.3.5. 2020-08-07 20:56:47 -05:00
protobuf.scm gnu: python-protobuf: Update to 3.12.4. 2020-08-03 08:54:26 +02:00
pth.scm
pulseaudio.scm gnu: Add noisetorch. 2020-08-06 18:54:03 +02:00
pumpio.scm
pure.scm
purescript.scm
pv.scm
python-check.scm gnu: Add python-pytest-trio. 2020-08-09 14:53:20 +03:00
python-compression.scm
python-crypto.scm gnu: Add python-certipy. 2020-08-09 15:37:28 +03:00
python-science.scm gnu: Add python-sgp4. 2020-08-16 09:42:36 +02:00
python-web.scm gnu: Add python-hypercorn. 2020-08-17 07:54:17 +03:00
python-xyz.scm gnu: python-typing: Update to 3.7.4.3. 2020-08-13 16:09:42 +02:00
python.scm
qt.scm gnu: qtserialbus: Add libsocketcan support. 2020-08-11 00:12:40 -04:00
radio.scm gnu: libosmo-dsp: Remove unused input. 2020-07-30 18:18:12 +02:00
ragel.scm
rails.scm
ratpoison.scm
rcm.scm
rdesktop.scm
rdf.scm gnu: Add python-cfgraph. 2020-08-09 15:33:03 +03:00
re2c.scm
readline.scm
rednotebook.scm
regex.scm
robotics.scm
rpc.scm
rrdtool.scm
rsync.scm
ruby.scm gnu: ruby-kramdown: Update to 2.3.0. 2020-08-19 17:28:52 +02:00
rush.scm
rust-apps.scm gnu: Add watchexec. 2020-08-04 15:57:35 +02:00
rust.scm gnu: rust-1.45: Update to 1.45.2. 2020-08-03 18:00:29 +02:00
sagemath.scm
samba.scm
sawfish.scm
scanner.scm
scheme.scm gnu: racket: Update to 7.8. 2020-08-06 12:03:44 +02:00
screen.scm
scribus.scm
scsi.scm
sdcc.scm
sdl.scm
search.scm
security-token.scm
selinux.scm
sequoia.scm gnu: rust-proc-macro2: Don't include minor version in variable name. 2020-08-04 15:57:33 +02:00
serialization.scm
serveez.scm
shells.scm gnu: xonsh: Update to 0.9.19. 2020-08-13 16:09:42 +02:00
shellutils.scm
simh.scm
simulation.scm
skarnet.scm
skribilo.scm
slang.scm
smalltalk.scm
sml.scm
speech.scm gnu: Add flite. 2020-08-18 22:56:26 +02:00
sphinx.scm
spice.scm
sqlite.scm
squirrel.scm
ssh.scm gnu: guile-ssh: Update to commit 688d7f. 2020-08-16 23:17:22 -04:00
sssd.scm
stalonetray.scm
statistics.scm gnu: r-pbapply: Update to 1.4-3. 2020-08-20 19:32:24 +02:00
stb.scm
stenography.scm
storage.scm gnu: ceph: Update to 14.2.11. 2020-08-13 16:09:40 +02:00
suckless.scm
swig.scm
sync.scm gnu: rclone: Update to 1.52.3. 2020-08-17 17:33:47 +02:00
syncthing.scm
syndication.scm
synergy.scm
task-management.scm
tbb.scm
tcl.scm
telephony.scm gnu: libtgvoip: Fix loading of shared libraries. 2020-08-07 21:12:35 -05:00
terminals.scm gnu: alacritty: Fix on Wayland. 2020-08-10 20:35:44 +02:00
terraform.scm
tex.scm
texinfo.scm
text-editors.scm gnu: ne: Update to 3.3.0. 2020-08-20 21:17:04 +02:00
textutils.scm gnu: aha: Cross-compile. 2020-08-13 16:09:41 +02:00
time.scm
tls.scm gnu: p11-kit: Update to 0.23.21. 2020-08-20 21:17:03 +02:00
tmux.scm gnu: python-libtmux: Update to 0.8.3. 2020-08-20 18:40:45 +02:00
tor.scm
toys.scm
tryton.scm
tv.scm
uml.scm gnu: plantuml: Update to 1.2020.15. 2020-08-01 09:13:40 +02:00
unicode.scm
unrtf.scm
upnp.scm
usb-modeswitch.scm
uucp.scm
valgrind.scm
version-control.scm gnu: gitolite: Update to 3.6.12. 2020-08-15 22:09:07 +02:00
video.scm gnu: tslib: Update to 1.22. 2020-08-19 20:03:56 +02:00
vim.scm gnu: vim: Update to 8.2.1471. 2020-08-17 11:07:23 +03:00
virtualization.scm gnu: ganeti: Tell GHC to use shared libraries. 2020-08-19 23:58:47 -04:00
visidata.scm
vlang.scm gnu: v: Remove unnecessary input. 2020-08-06 09:04:12 +03:00
vnc.scm
vpn.scm
vulkan.scm
w3m.scm
wdiff.scm
web-browsers.scm gnu: luakit: Update to 2.2. 2020-08-13 00:17:22 +02:00
web.scm gnu: perl-catalyst-plugin-configloader: Update to 0.35. 2020-08-20 21:17:05 +02:00
webkit.scm gnu: libwpe: Update package definition. 2020-08-19 02:59:00 +02:00
wget.scm
wicd.scm
wine.scm
wireservice.scm gnu: csvkit: Fix problem caused by the update of python-slugify. 2020-07-30 00:57:28 +02:00
wm.scm gnu: waybar: Remove unrecognized configure flag. 2020-08-19 11:05:05 +03:00
wordnet.scm
wv.scm
wxwidgets.scm gnu: wxwidgets: Fix MIME type loading. 2020-08-16 17:31:09 -04:00
xdisorg.scm gnu: xsecurelock: Use pandoc instead of ghc-pandoc. 2020-08-15 09:29:12 +02:00
xfce.scm gnu: tumbler: Update to 0.2.9. 2020-08-11 22:26:15 +02:00
xfig.scm
xiph.scm
xml.scm gnu: Add libxmlb. 2020-08-18 22:54:01 +02:00
xnee.scm
xorg.scm gnu: xf86-video-geode: Remove unnecessary patch. 2020-08-19 20:03:55 +02:00
zile.scm
zwave.scm