guix/gnu/packages
Ricardo Wurmus 589ac42212
gnu: r-cicero: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.8.1.
2020-12-09 23:30:12 +01:00
..
aux-files
patches gnu: pciutils: Fix compilation error on GNU/Hurd. 2020-12-09 14:13:33 +01:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm gnu: thermald: Update to 2.4.1. 2020-12-07 21:52:22 +01:00
adns.scm
agda.scm
aidc.scm
algebra.scm gnu: eigen: Add upstream bugfix patch. 2020-11-23 19:22:31 +01:00
android.scm
animation.scm gnu: Add gnash. 2020-11-28 15:56:08 +00:00
anthy.scm
antivirus.scm
apl.scm
apr.scm
arcan.scm
aspell.scm
assembly.scm
astronomy.scm
attr.scm
audio.scm gnu: libopenmpt: Update to 0.5.4. 2020-12-06 23:50:44 +01:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm gnu: autotools: Add version 2.70. 2020-12-08 22:28:00 +01:00
avahi.scm
avr.scm
axoloti.scm
backup.scm gnu: par2cmdline: Update to 0.8.1. 2020-11-30 00:25:52 +01:00
base.scm
bash.scm
batik.scm
bdw-gc.scm
benchmark.scm gnu: fio: Update to 3.25. 2020-12-06 23:50:43 +01:00
bioconductor.scm gnu: r-cicero: Update to 1.8.1. 2020-12-09 23:30:12 +01:00
bioinformatics.scm gnu: r-rhtslib: Propagate zlib. 2020-12-09 12:12:48 +01:00
bison.scm
bittorrent.scm gnu: Transmission: Fix localization of transmission-gtk. 2020-11-27 23:40:53 -05:00
boost.scm
bootloaders.scm gnu: grub-minimal: Fix cross-compilation. 2020-11-24 10:40:39 +01:00
bootstrap.scm
browser-extensions.scm gnu: uBlock Origin: Update to 1.31.2. 2020-12-03 21:56:52 +01:00
build-tools.scm
busybox.scm
c.scm gnu: udunits: Add a note on versioning. 2020-11-26 20:44:39 +01:00
calcurse.scm
calendar.scm
ccache.scm
cdrom.scm
cedille.scm
certs.scm
check.scm gnu: python-pytest-xdist: Update to 2.1.0. 2020-11-29 14:02:46 -05:00
chemistry.scm
chez.scm
chicken.scm gnu: Added chicken-agrep. 2020-12-03 16:18:44 +01:00
chromium.scm gnu: ungoogled-chromium: Update to 87.0.4280.88-0.b78cb92 [security fixes]. 2020-12-05 18:06:53 +01:00
ci.scm gnu: cuirass: Update to 0.0.1-56.697fa14. 2020-12-08 11:48:53 +01:00
cinnamon.scm
clojure.scm gnu: clojure: Add bin/clojure wrapper. 2020-11-20 20:03:03 +00:00
cluster.scm gnu: drbd-utils: Update to 9.15.1. 2020-11-30 21:17:25 +01:00
cmake.scm gnu: cmake: Update to 3.19.1. 2020-11-26 23:32:29 +01:00
cobol.scm
code.scm
commencement.scm gnu: gcc-boot0, cross-base: Enable 128-bit long double for POWER9. 2020-11-26 23:39:16 +01:00
compression.scm gnu: google-brotli: Update to 1.0.9 (Fixes CVE-2020-8927). 2020-12-03 08:59:40 +02:00
compton.scm
configuration-management.scm
conky.scm
connman.scm
convmv.scm
cook.scm
coq.scm
cpio.scm
cpp.scm gnu: Add libexpected. 2020-12-05 21:10:59 -06:00
cppi.scm
cran.scm gnu: r-diversitree: Update to 0.9-15. 2020-12-09 22:03:38 +01:00
crates-graphics.scm gnu: Add rust-aom-sys-0.2. 2020-12-07 09:27:04 +01:00
crates-gtk.scm gnu: Add rust-gdk-0.13. 2020-12-05 14:45:14 +01:00
crates-io.scm gnu: Add rust-nasm-rs-0.2. 2020-12-07 09:27:15 +01:00
cross-base.scm gnu: gcc-boot0, cross-base: Enable 128-bit long double for POWER9. 2020-11-26 23:39:16 +01:00
crypto.scm
cryptsetup.scm
cups.scm gnu: hplip: Update to 3.20.11. 2020-12-06 23:50:44 +01:00
curl.scm
cvassistant.scm
cybersecurity.scm gnu: ropgadget: Update to 6.4. 2020-12-06 23:50:43 +01:00
cyrus-sasl.scm
databases.scm Merge branch 'master' into staging 2020-11-26 01:08:35 +01:00
datamash.scm
datastructures.scm gnu: Add tllist. 2020-12-06 18:30:12 +01:00
dav.scm
dbm.scm
dc.scm
debian.scm gnu: Add reprepro. 2020-11-25 09:08:09 +02:00
debug.scm
dejagnu.scm
dhall.scm
dico.scm
dictionaries.scm gnu: grammalecte: Update to 2.0.0. 2020-12-07 22:43:57 +01:00
diffoscope.scm gnu: diffoscope: Update to 162. 2020-12-06 19:28:56 -08:00
digest.scm
direct-connect.scm
disk.scm
display-managers.scm
distributed.scm
django.scm gnu: python-django-q: Update to 1.3.4. 2020-11-21 00:29:38 +01:00
djvu.scm gnu: Add ocrodjvu. 2020-11-29 14:36:57 +01:00
dlang.scm
dns.scm gnu: nsd: Update to 4.3.4. 2020-12-06 23:50:43 +01:00
docbook.scm
docker.scm gnu: python-docker: Propagate runtime dependency. 2020-11-21 01:21:31 +01:00
documentation.scm
drones.scm
dunst.scm
dvtm.scm
easyrpg.scm
ebook.scm gnu: calibre: Fix QTWEBENGINEPROCESS_PATH wrapping. 2020-11-28 16:33:32 +00:00
ed.scm
education.scm gnu: snap: Update to 6.3.7. 2020-12-02 22:03:40 +01:00
efi.scm
electronics.scm
elf.scm
elixir.scm
elm.scm
emacs-xyz.scm gnu: Add emacs-helm-switch-to-repl. 2020-12-09 17:27:51 +01:00
emacs.scm gnu: emacs-next-pgtk: Update to savannah feature/pgtk branch. 2020-12-01 00:10:48 +01:00
embedded.scm gnu: openocd: Fix build. 2020-12-01 11:08:57 +01:00
emulators.scm gnu: scummvm: Update source URL. 2020-12-08 08:46:54 +01:00
enchant.scm
engineering.scm gnu: freecad: Update to 0.18.5 2020-12-06 22:28:10 +01:00
enlightenment.scm
entr.scm
erlang.scm
fabric-management.scm
fcitx.scm
fcitx5.scm gnu: fcitx5-material-color-theme: Add source file-name. 2020-12-08 18:14:31 +02:00
figlet.scm
file-systems.scm gnu: Add bcachefs-static. 2020-11-29 17:28:39 +01:00
file.scm
finance.scm gnu: monero-gui: Update to 0.17.1.6. 2020-12-09 11:34:25 +01:00
firmware.scm
flashing-tools.scm gnu: dfu-util: Update to 0.10. 2020-11-30 21:43:51 +01:00
flex.scm
fltk.scm
fonts.scm gnu: font-gnu-unifont: Always download source over HTTPS. 2020-11-25 20:31:31 +01:00
fontutils.scm gnu: Add fcft. 2020-12-06 18:30:12 +01:00
forth.scm
fpga.scm
freedesktop.scm gnu: libfprint: Update to 1.90.4. 2020-11-30 21:43:50 +01:00
freeipmi.scm
fribidi.scm
ftp.scm
fvwm.scm
game-development.scm gnu: guile-chickadee: Use Guile 3.0. 2020-11-23 15:52:42 -05:00
games.scm gnu: libmanette: Update to 0.2.6. 2020-12-07 21:52:22 +01:00
gawk.scm
gcal.scm
gcc.scm
gd.scm gnu: perl-gd: Update to 2.73. 2020-11-30 00:25:51 +01:00
gdb.scm
genealogy.scm
genimage.scm
geo.scm gnu: libspatialite: Update to 5.0.0. 2020-12-01 18:43:56 +01:00
gettext.scm
ghostscript.scm
gimp.scm gnu: libmypaint: Update to 1.6.1. 2020-12-08 20:06:34 +00:00
gkrellm.scm
gl.scm gnu: Add glmark2. 2020-12-07 16:08:42 -05:00
glib.scm Revert "gnu: gobject-introspection: Update to 1.64.1." 2020-12-01 23:05:31 +01:00
gnome-xyz.scm gnu: Add greybird-gtk-theme. 2020-11-27 14:58:18 -05:00
gnome.scm gnu: libsoup: Patch docbook-xml references. 2020-12-03 08:59:52 +02:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm
gnupg.scm gnu: signing-party: Update to 2.11. 2020-11-30 00:25:51 +01:00
gnustep.scm
gnuzilla.scm gnu: icedove: Update to 78.5.1 [fixes CVE-2020-26970]. 2020-12-02 22:34:24 +01:00
gobby.scm
golang.scm gnu: Add go-github-com-aws-sdk. 2020-12-09 09:45:35 +02:00
gperf.scm
gpodder.scm gnu: gpodder: Update to 3.10.17. 2020-11-23 22:12:19 +01:00
gps.scm gnu: gpxsee: Update to 7.37. 2020-11-30 00:25:52 +01:00
graph.scm gnu: igraph: Omit static library. 2020-11-26 04:22:50 +01:00
graphics.scm
graphviz.scm gnu: python-pydot: Update home-page URI. 2020-11-23 15:43:36 +02:00
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm gnu: gst-plugins-good, gst-plugins-ugly: Add missing common phases. 2020-11-27 19:33:53 +01:00
gtk.scm Merge branch 'master' into staging 2020-11-26 01:08:35 +01:00
guile-wm.scm
guile-xyz.scm gnu: guile-lib: Support cross-compilation. 2020-12-06 21:09:41 +00:00
guile.scm gnu: guile-bytestructures: Update to 1.0.9. 2020-11-26 00:05:39 +01:00
gv.scm
gxmessage.scm
hardware.scm
haskell-apps.scm gnu: git-annex: Update to 8.20201127. 2020-12-01 00:10:48 +01:00
haskell-check.scm Merge branch 'master' into staging 2020-11-26 23:59:28 +01:00
haskell-crypto.scm gnu: Add ghc-cryptonite-conduit. 2020-12-06 21:34:57 -05:00
haskell-web.scm gnu: Add ghc-wai-cors. 2020-12-06 21:35:35 -05:00
haskell-xyz.scm gnu: pandoc-citeproc: Separate outputs. 2020-12-01 15:39:33 +01:00
haskell.scm
heads.scm gnu: Add heads-dev-cpio. 2020-11-22 11:05:11 +01:00
hexedit.scm
hugs.scm
hurd.scm
hyperledger.scm
i2p.scm
ibus.scm
icu4c.scm
idris.scm
idutils.scm
image-processing.scm
image-viewers.scm gnu: feh: Update to 3.6.1. 2020-12-07 21:52:22 +01:00
image.scm gnu: Add mypaint. 2020-12-08 20:06:38 +00:00
imagemagick.scm
inklingreader.scm
inkscape.scm
installers.scm
ipfs.scm
irc.scm gnu: weechat: Update to 3.0. 2020-12-01 20:55:43 +01:00
iso-codes.scm
jami.scm
java-compression.scm
java-graphics.scm
java-maths.scm
java.scm Merge branch 'master' into staging 2020-11-22 23:36:09 +01:00
javascript.scm gnu: Add cjson. 2020-12-08 09:26:46 +00:00
jemalloc.scm
jose.scm
jrnl.scm
julia-xyz.scm
julia.scm
jupyter.scm
kawa.scm
kde-frameworks.scm
kde-internet.scm
kde-multimedia.scm
kde-pim.scm
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm gnu: rsibreak: Update to 0.12.13. 2020-11-30 00:25:51 +01:00
kde.scm gnu: qca: Correct license. 2020-12-08 00:45:56 +01:00
kerberos.scm
key-mon.scm
kodi.scm
language.scm
ld-wrapper.in
lean.scm gnu: lean: Trim synopsis. 2020-11-26 04:22:51 +01:00
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm gnu: libphidget: Update to 2.1.9.20190409. 2020-11-29 23:15:53 +01:00
libreoffice.scm gnu: libreoffice: Build reproducibly. 2020-11-30 21:43:50 +01:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm gnu: hidapi: Update to 0.10.1. 2020-11-26 20:44:40 +01:00
license.scm
lighting.scm
linphone.scm gnu: bcg729: Update to 1.1.1. 2020-11-26 23:32:29 +01:00
linux.scm gnu: linux-libre 4.14: Update to 4.14.211. 2020-12-09 01:08:15 -05:00
lirc.scm
lisp-xyz.scm gnu: Add zs3. 2020-12-05 16:01:19 +01:00
lisp.scm gnu: sbcl: Simplify 'replace-asdf' phase. 2020-12-05 16:00:58 +01:00
llvm.scm
logging.scm
logo.scm
loko.scm gnu: loko: Update to 0.7.0 2020-11-28 23:05:46 -05:00
lolcode.scm
lout.scm
lsof.scm gnu: lsof: Cross-compile. 2020-11-23 05:44:11 +01:00
lua.scm
lxde.scm
lxqt.scm
m4.scm
machine-learning.scm gnu: Add python-opentsne. 2020-11-25 18:38:00 -05:00
magic-wormhole.scm
mail.scm gnu: isync: Use OpenSSL 1.1. 2020-12-08 13:25:27 -05:00
make-bootstrap.scm
man.scm
markup.scm
marst.scm
mastodon.scm
mate.scm
maths.scm gnu: dealii: Update to 9.2.0. 2020-12-09 13:42:05 -06:00
matrix.scm
maven-parent-pom.scm
maven.scm
mc.scm
mcrypt.scm
medical.scm
mercury.scm gnu: mercury: Update to 20.06.1. 2020-11-25 16:40:29 -06:00
mes.scm
messaging.scm gnu: utox: Update home-page and description. 2020-12-03 23:18:30 +01:00
microcom.scm
mingw.scm
moe.scm
monitoring.scm gnu: zabbix-agentd: Update to 5.2.2. 2020-12-07 00:38:44 +01:00
mono.scm
moreutils.scm
motti.scm
mp3.scm gnu: libmp3splt: Support splitting FLAC files. 2020-12-03 16:50:20 +01:00
mpd.scm
mpi.scm gnu: hwloc: Add "doc" output. 2020-11-26 00:05:39 +01:00
mtools.scm gnu: mtools: Update to 4.0.26. 2020-11-30 21:17:25 +01:00
multiprecision.scm
music.scm gnu: Add audacious. 2020-11-26 18:33:05 +01:00
musl.scm
nano.scm gnu: nano: Update to 5.4. 2020-12-02 18:05:33 +02:00
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: shadowsocks: Build against openssl. 2020-12-08 00:45:56 +01:00
nfs.scm
nickle.scm
nicotine.scm gnu: nicotine: Update to 2.1.2. 2020-11-30 12:23:54 -05:00
nim.scm
ninja.scm
node-xyz.scm
node.scm
noweb.scm
nss.scm
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm gnu: ocaml-menhir: Update to 20200211. 2020-12-08 20:18:11 +00:00
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm
opencog.scm
openkinect.scm
openldap.scm
openpgp.scm
openstack.scm
orpheus.scm
ots.scm
package-management.scm gnu: guix: Update to 799f066. 2020-12-08 23:38:04 +01:00
pantheon.scm
parallel.scm gnu: Add slurm-18.08. 2020-12-01 21:12:17 +02:00
pascal.scm
password-utils.scm gnu: yapet: Omit duplicate licence files. 2020-12-07 21:52:22 +01:00
patchutils.scm
pciutils.scm gnu: pciutils: Fix compilation error on GNU/Hurd. 2020-12-09 14:13:33 +01:00
pcre.scm
pdf.scm gnu: weasyprint: Update to 52.1. 2020-11-29 14:02:48 -05:00
pem.scm
pep.scm
perl-check.scm
perl-compression.scm
perl-web.scm
perl.scm
perl6.scm
phabricator.scm
photo.scm gnu: photoflare: Update to 1.6.6. 2020-11-30 21:17:26 +01:00
php.scm gnu: php: Update to 7.4.13. 2020-11-26 04:22:51 +01:00
piet.scm
pkg-config.scm
plotutils.scm gnu: asymptote: Update to 2.68. 2020-11-24 23:22:45 +01:00
poedit.scm
polkit.scm
popt.scm
presentation.scm
pretty-print.scm
printers.scm
profiling.scm
prolog.scm
protobuf.scm gnu: protobuf: Update to 3.14.0. 2020-11-25 08:10:47 -06:00
pth.scm
pulseaudio.scm
pumpio.scm
pure.scm
purescript.scm
pv.scm
python-check.scm gnu: python-mypy: Update to 0.790. 2020-11-29 14:02:47 -05:00
python-compression.scm gnu: python-brotli: Update to 1.0.9. 2020-11-26 21:00:32 +01:00
python-crypto.scm Merge branch 'master' into staging 2020-11-22 23:36:09 +01:00
python-science.scm gnu: Add python-baycomp. 2020-11-24 14:01:03 +01:00
python-web.scm gnu: python-tinycss2: Update to 1.1.0. 2020-11-29 14:02:47 -05:00
python-xyz.scm gnu: python-llfuse: Update to 1.3.8. 2020-12-09 15:41:25 -05:00
python.scm
qt.scm Merge branch 'master' into staging 2020-11-22 23:36:09 +01:00
radio.scm gnu: chirp: Update to 20201121. 2020-11-24 12:15:33 +01:00
ragel.scm
rails.scm
raspberry-pi.scm
ratpoison.scm
rcm.scm
rdesktop.scm
rdf.scm
re2c.scm gnu: Update a copyright line. 2020-11-24 22:12:42 +01:00
readline.scm
rednotebook.scm
regex.scm gnu: re2: Update to 2020-11-01. 2020-11-25 12:01:51 -06:00
robotics.scm
rpc.scm gnu: grpc: Update to 1.33.2. 2020-11-25 12:02:04 -06:00
rrdtool.scm
rsync.scm
ruby.scm gnu: mruby: Update to 2.1.2. 2020-12-08 22:09:30 +02:00
rush.scm
rust-apps.scm gnu: bat: Fix build. 2020-12-06 13:54:59 +01:00
rust.scm
sagemath.scm
samba.scm
sawfish.scm
scanner.scm
scheme.scm gnu: racket-minimal: Update upstream tarball hash. 2020-11-24 17:44:46 +01:00
screen.scm
scribus.scm
scsi.scm
sdcc.scm
sdl.scm
search.scm
security-token.scm Merge branch 'master' into staging 2020-11-26 23:59:28 +01:00
selinux.scm
sequoia.scm gnu: sequoia: Update to 0.20.0. 2020-12-02 21:53:44 +01:00
serialization.scm
serveez.scm
shells.scm gnu: oil: Update to 0.8.5. 2020-11-25 19:30:27 -05:00
shellutils.scm gnu: hstr: Update to 2.3. 2020-11-21 23:00:07 +01:00
simh.scm
simulation.scm
skarnet.scm gnu: s6-linux-init: Omit static library. 2020-11-24 12:15:33 +01:00
skribilo.scm
slang.scm
smalltalk.scm
sml.scm
speech.scm
sphinx.scm
spice.scm
sqlite.scm
squirrel.scm
ssh.scm gnu: webssh: Update to 1.5.3. 2020-11-29 23:49:20 +03:00
sssd.scm
stalonetray.scm
statistics.scm gnu: r-lubridate: Update to 1.7.9.2. 2020-12-09 22:03:39 +01:00
stb.scm
stenography.scm
storage.scm gnu: ceph: Update to 14.2.15. 2020-11-25 20:31:31 +01:00
suckless.scm
swig.scm
sync.scm
syncthing.scm
syndication.scm
synergy.scm
task-management.scm
tbb.scm
tcl.scm
telephony.scm
terminals.scm gnu: Add foot. 2020-12-06 18:30:12 +01:00
terraform.scm
tex.scm gnu: texmaker: Update to 5.0.4. 2020-11-29 20:44:31 +01:00
texinfo.scm
text-editors.scm gnu: geany: Update to 1.37.1. 2020-12-03 23:25:40 +01:00
textutils.scm gnu: python-pandocfilters: Update to 1.4.3. 2020-11-23 05:44:09 +01:00
time.scm
tls.scm gnu: OpenSSL: Update to 1.1.1i [fixes CVE-2020-1971]. 2020-12-08 19:48:09 -05:00
tmux.scm
tor.scm gnu: prixovy: Enable Brotli inspection. 2020-11-29 20:44:31 +01:00
toys.scm
tryton.scm
tv.scm
uml.scm
unicode.scm
unrtf.scm
upnp.scm
usb-modeswitch.scm
uucp.scm
valgrind.scm
version-control.scm gnu: gita: Install shell completions. 2020-12-08 08:09:21 +03:00
video.scm gnu: rav1e: Update to 0.3.4. 2020-12-07 09:27:27 +01:00
vim.scm Revert "gnu: vim: Run more tests." 2020-12-07 12:48:07 +02:00
virtualization.scm gnu: python-transient: Update to 0.12. 2020-12-06 18:08:30 -06:00
visidata.scm
vlang.scm
vnc.scm
vpn.scm gnu: GnuTLS: Update replacement to 3.6.15 [fixes CVE-2020-24659]. 2020-12-03 21:56:52 +01:00
vulkan.scm
w3m.scm
wdiff.scm
web-browsers.scm gnu: bombadillo: Update to 2.3.3. 2020-12-07 21:52:22 +01:00
web.scm gnu: Add kiwix-desktop. 2020-12-09 18:25:32 +01:00
webkit.scm gnu: webkitgtk: Update to 2.30.3. 2020-11-23 05:44:09 +01:00
wget.scm
wicd.scm
wine.scm gnu: wine: Improve formatting of some package definitions. 2020-11-28 14:37:38 +00:00
wireservice.scm
wm.scm gnu: Add lemonbar-xft. 2020-12-09 09:10:33 +00:00
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm Revert "gnu: pixman: Update to 0.40.0." 2020-12-01 23:05:15 +01:00
xfce.scm gnu: xfce4-whiskermenu-plugin: Fix installed shell script. 2020-12-07 16:08:41 -05:00
xfig.scm
xiph.scm
xml.scm gnu: pugixml: Update to 1.11. 2020-11-28 22:27:11 +01:00
xnee.scm
xorg.scm gnu: xorg-server: Update to 1.20.10 [fixes CVE-2020-14360, CVE-2020-25712]. 2020-12-01 22:30:52 +01:00
zile.scm
zwave.scm