mirror of
https://git.in.rschanz.org/ryan77627/guix.git
synced 2024-12-26 06:18:07 -05:00
6161141e91
* gnu/packages/patches/superlu-dist-awpm-grid.patch: New file. * gnu/packages/maths.scm (superlu-dist)[source]: Upgrade to 6.0.0. Remove extraneous 'use-modules' in snippet. [build-system]: Change to cmake-build-system. [propagated-inputs]: Replace pt-scotch with pt-scotch32 to match integer sizes. Add "parmetis" input, from pt-scotch32. Move lapack to ... [inputs]: ...here. Add openblas and combinatorial-blas. [arguments]: Replace 'configure' phase with #:configure-flags. Add 'set-c++-standard' and 'omp-setup' phases. Remove 'create-install-directories, 'check', and 'install' phases, which are now handled by cmake. * gnu/local.mk (dist_patch_DATA): Add patch.
36 lines
1.6 KiB
Diff
36 lines
1.6 KiB
Diff
Create the CombBLAS::SpParMat with the MPI_Comm from the input 'gridinfo_t'.
|
|
This prevents a warning/error from CombBLAS about using MPI_COMM_WORLD.
|
|
|
|
--- a/SRC/AWPM_CombBLAS.hpp
|
|
+++ b/SRC/AWPM_CombBLAS.hpp
|
|
@@ -52,7 +52,7 @@
|
|
{
|
|
printf("AWPM only supports square process grid. Retuning without a permutation.\n");
|
|
}
|
|
- combblas::SpParMat < int_t, double, combblas::SpDCCols<int_t,double> > Adcsc;
|
|
+ combblas::SpParMat < int_t, double, combblas::SpDCCols<int_t,double> > Adcsc(grid->comm);
|
|
std::vector< std::vector < std::tuple<int_t,int_t,double> > > data(procs);
|
|
|
|
/* ------------------------------------------------------------
|
|
@@ -100,11 +100,10 @@
|
|
combblas::AWPM(Adcsc, mateRow2Col, mateCol2Row,true);
|
|
|
|
// now gather the matching vector
|
|
- MPI_Comm World = mateRow2Col.getcommgrid()->GetWorld();
|
|
int * rdispls = new int[procs];
|
|
int sendcnt = mateRow2Col.LocArrSize();
|
|
int * recvcnt = new int[procs];
|
|
- MPI_Allgather(&sendcnt, 1, MPI_INT, recvcnt, 1, MPI_INT, World);
|
|
+ MPI_Allgather(&sendcnt, 1, MPI_INT, recvcnt, 1, MPI_INT, grid->comm);
|
|
rdispls[0] = 0;
|
|
for(int i=0; i<procs-1; ++i)
|
|
{
|
|
@@ -112,7 +111,7 @@
|
|
}
|
|
int_t *senddata = (int_t *)mateRow2Col.GetLocArr();
|
|
|
|
- MPI_Allgatherv(senddata, sendcnt, combblas::MPIType<int_t>(), ScalePermstruct->perm_r, recvcnt, rdispls, combblas::MPIType<int_t>(), World);
|
|
+ MPI_Allgatherv(senddata, sendcnt, combblas::MPIType<int_t>(), ScalePermstruct->perm_r, recvcnt, rdispls, combblas::MPIType<int_t>(), grid->comm);
|
|
|
|
delete[] rdispls;
|
|
delete[] recvcnt;
|