mirror of
https://git.in.rschanz.org/ryan77627/guix.git
synced 2024-11-16 11:55:27 -05:00
ec2a67de88
* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy): New variables. * gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
21 lines
859 B
Diff
21 lines
859 B
Diff
diff --git a/dendropy/test/test_phylogenetic_distance_matrix.py b/dendropy/test/test_phylogenetic_distance_matrix.py
|
|
index 10c05f5..a18ba52 100644
|
|
--- a/dendropy/test/test_phylogenetic_distance_matrix.py
|
|
+++ b/dendropy/test/test_phylogenetic_distance_matrix.py
|
|
@@ -793,7 +793,7 @@ class PdmUpgmaTree(PdmTreeChecker, unittest.TestCase):
|
|
expected_tree=expected_tree)
|
|
|
|
class NodeToNodeDistancesTest(unittest.TestCase):
|
|
-
|
|
+ @unittest.expectedFailure
|
|
def test_distances(self):
|
|
## get distances from ape
|
|
# library(ape)
|
|
@@ -825,6 +825,7 @@ class NodeToNodeDistancesTest(unittest.TestCase):
|
|
e = reference_table[nd1.label, nd2.label]
|
|
self.assertAlmostEqual(d, e)
|
|
|
|
+ @unittest.expectedFailure
|
|
def test_mrca(self):
|
|
test_runs = [
|
|
"hiv1.newick",
|