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* gnu/packages/benchmarks.scm (intel-mpi-benchmarks): Update to 2019.6. [source]: Add 'snippet'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
345 lines
14 KiB
Scheme
345 lines
14 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2016, 2017 Marius Bakke <mbakke@fastmail.com>
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;;; Copyright © 2017 Dave Love <fx@gnu.org>
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;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
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;;; Copyright © 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
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;;; Copyright © 2019 Eric Bavier <bavier@member.fsf.org>
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;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com>
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;;; Copyright © 2019 Ludovic Courtès <ludo@gnu.org>
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;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com>
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;;; Copyright © 2020 malte Frank Gerdes <malte.f.gerdes@gmail.com>
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;;; Copyright © 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com>
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;;; Copyright © 2020 Greg Hogan <code@greghogan.com>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (gnu packages benchmark)
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#:use-module ((guix licenses) #:prefix license:)
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#:use-module (guix packages)
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#:use-module (guix download)
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#:use-module (guix git-download)
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#:use-module (guix build-system cmake)
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#:use-module (guix build-system gnu)
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#:use-module (guix build-system python)
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#:use-module (gnu packages)
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#:use-module (gnu packages check)
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#:use-module (gnu packages compression)
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#:use-module (gnu packages linux)
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#:use-module (gnu packages maths)
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#:use-module (gnu packages mpi)
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#:use-module (gnu packages perl)
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#:use-module (gnu packages python)
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#:use-module (gnu packages python-science)
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#:use-module (gnu packages python-web)
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#:use-module (gnu packages python-xyz)
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#:use-module (gnu packages storage)
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#:use-module (ice-9 match))
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(define-public fio
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(package
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(name "fio")
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(version "3.25")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://brick.kernel.dk/snaps/"
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"fio-" version ".tar.bz2"))
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(sha256
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(base32
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"16r734an459cz1ax3jyhxc269i3syzdkll4qbv18wqaxpm5y34v6"))))
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(build-system gnu-build-system)
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(arguments
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'(#:test-target "test"
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#:phases
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(modify-phases %standard-phases
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(add-after
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'unpack 'patch-paths
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(lambda* (#:key inputs outputs #:allow-other-keys)
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(let ((out (assoc-ref outputs "out"))
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(gnuplot (string-append (assoc-ref inputs "gnuplot")
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"/bin/gnuplot")))
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(substitute* "tools/plot/fio2gnuplot"
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(("/usr/share/fio") (string-append out "/share/fio"))
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;; FIXME (upstream): The 'gnuplot' executable is used inline
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;; in various os.system() calls mixed with *.gnuplot filenames.
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(("; do gnuplot") (string-append "; do " gnuplot))
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(("gnuplot mymath") (string-append gnuplot " mymath"))
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(("gnuplot mygraph") (string-append gnuplot " mygraph")))
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#t)))
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(replace 'configure
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(lambda* (#:key outputs #:allow-other-keys)
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;; The configure script doesn't understand some of the
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;; GNU options, so we can't use #:configure-flags.
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(let ((out (assoc-ref outputs "out")))
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(invoke "./configure"
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(string-append "--prefix=" out))
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#t)))
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;; The main `fio` executable is fairly small and self contained.
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;; Moving the auxiliary python and gnuplot scripts to a separate
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;; output saves almost 400 MiB on the closure.
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(add-after 'install 'move-outputs
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(lambda* (#:key outputs #:allow-other-keys)
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(let ((oldbin (string-append (assoc-ref outputs "out") "/bin"))
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(newbin (string-append (assoc-ref outputs "utils") "/bin")))
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(mkdir-p newbin)
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(for-each (lambda (file)
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(let ((src (string-append oldbin "/" file))
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(dst (string-append newbin "/" file)))
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(link src dst)
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(delete-file src)))
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'("fio2gnuplot" "fiologparser_hist.py"
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"fiologparser.py"))
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;; Make sure numpy et.al is found.
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(wrap-program (string-append newbin "/fiologparser_hist.py")
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`("PYTHONPATH" ":" prefix (,(getenv "PYTHONPATH"))))
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#t))))))
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(outputs '("out" "utils"))
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(inputs
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`(("ceph" ,ceph "lib")
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("libaio" ,libaio)
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("gnuplot" ,gnuplot)
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("zlib" ,zlib)
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("python-numpy" ,python2-numpy)
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("python-pandas" ,python2-pandas)
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("python" ,python-2)))
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(home-page "https://github.com/axboe/fio")
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(synopsis "Flexible I/O tester")
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(description
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"fio is a tool that will spawn a number of threads or processes doing a
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particular type of I/O action as specified by the user. The typical use of fio
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is to write a job file matching the I/O load one wants to simulate.")
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;; The software is distributed under the GPL2, but a handful of components
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;; are covered by other licenses.
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(license (list license:gpl2 license:gpl2+ license:bsd-2
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license:public-domain))))
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;; Parameterized in anticipation of m(va)pich support
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(define (intel-mpi-benchmarks mpi)
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(package
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(name (string-append "intel-mpi-benchmarks"
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(if (string=? (package-name mpi) "openmpi")
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""
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(string-append "-" (package-name mpi)))))
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(version "2019.6")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/intel/mpi-benchmarks")
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(commit (string-append "IMB-v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"02hxbk9g9nl59bk5qcfl3djj7b58vsqys340m1xdbyqwcrbnahh9"))
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(modules '((guix build utils)))
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(snippet
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'(begin
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;; Some source configuration files in the original tarball
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;; have inappropriate execute permissions, which interferes
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;; with the install phase below.
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(for-each (lambda (file) (chmod file #o444))
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(find-files "WINDOWS" "."))
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#t))))
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(build-system gnu-build-system)
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(inputs
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`(("mpi" ,mpi)))
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(delete 'configure)
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(delete 'check)
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(replace 'install
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(lambda* (#:key outputs #:allow-other-keys)
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(define (benchmark? file stat)
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(and (string-prefix? "IMB-" (basename file))
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(executable-file? file)))
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(let* ((out (assoc-ref outputs "out"))
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(bin (string-append out "/bin")))
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(for-each (lambda (file)
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(install-file file bin))
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(find-files "." benchmark?))
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#t))))
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;; The makefile doesn't express all the dependencies, it seems.
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#:parallel-build? #t
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#:make-flags '("CC=mpicc" "CXX=mpicxx")))
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(home-page "https://software.intel.com/en-us/articles/intel-mpi-benchmarks")
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(synopsis "Benchmarks for the Message Passing Interface (MPI)")
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(description
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"This package provides benchmarks for implementations of the @dfn{Message
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Passing Interface} (MPI). It contains MPI performance measurements for
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point-to-point and global communication, and file, operations for a range of
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message sizes. The generated benchmark data fully characterize:
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@itemize
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@item
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Performance of a cluster system, including node performance, network latency,
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and throughput;
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@item
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Efficiency of the MPI implementation.
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@end itemize")
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(license license:cpl1.0)))
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(define-public intel-mpi-benchmarks/openmpi
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(intel-mpi-benchmarks openmpi))
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(define-public imb-openmpi
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(deprecated-package "imb-openmpi" intel-mpi-benchmarks/openmpi))
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(define-public multitime
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(package
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(name "multitime")
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(version "1.4")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://tratt.net/laurie/src/"
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"multitime/releases/"
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"multitime-" version ".tar.gz"))
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(sha256
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(base32
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"0iyfsdrbyqa7a4ifrh19l9a48hgv7ld6m0d8yf9bkl12q0qw91fx"))))
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(build-system gnu-build-system)
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(arguments '(#:tests? #f)) ; there are no tests
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(home-page "https://tratt.net/laurie/src/multitime/")
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(synopsis "Time command execution over multiple executions")
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(description
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"The @code{time} utility is a simple and often effective way of measuring
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how long a command takes to run (wall time). Unfortunately, running a command
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once can give misleading timings. @code{multitime} is, in essence, a simple
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extension to @code{time} which runs a command multiple times and prints the
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timing means, standard deviations, mins, medians, and maxes having done so.
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This can give a much better understanding of the command's performance.")
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(license license:expat)))
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(define-public benchmark
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(package
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(name "benchmark")
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(version "1.5.2")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/google/benchmark")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"13rxagpzw6bal6ajlmrxlh9kgfvcixn6j734b2bvfqz7lch8n0pa"))))
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(build-system cmake-build-system)
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(native-inputs
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`(("googletest-source" ,(package-source googletest))
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("googletest" ,googletest)))
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(add-after 'unpack 'unpack-googletest
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(lambda* (#:key inputs #:allow-other-keys)
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(copy-recursively (assoc-ref inputs "googletest-source")
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"googletest")
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#t)))))
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(home-page "https://github.com/google/benchmark")
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(synopsis "Microbenchmark support library")
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(description
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"Benchmark is a library to benchmark code snippets, similar to unit
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tests.")
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(license license:asl2.0)))
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(define-public bonnie++
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(package
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(name "bonnie++")
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(version "1.98")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://www.coker.com.au/bonnie++/bonnie++-"
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version ".tgz"))
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(sha256
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(base32
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"010bmlmi0nrlp3aq7p624sfaj5a65lswnyyxk3cnz1bqig0cn2vf"))))
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(build-system gnu-build-system)
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(native-inputs
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`(("perl" ,perl)))
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(arguments '(#:tests? #f)) ; there are no tests
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(home-page "https://doc.coker.com.au/projects/bonnie/")
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(synopsis "Hard drive and file system benchmark suite")
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(description
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"Bonnie++ is a benchmark suite that is aimed at performing a number of
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simple tests of hard drive and file system performance. Bonnie++ allows you to
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benchmark how your file systems perform with respect to data read and write
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speed, the number of seeks that can be performed per second, and the number of
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file metadata operations that can be performed per second.")
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(license license:gpl2))) ;GPL 2 only, see copyright.txt
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(define-public python-locust
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(package
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(name "python-locust")
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(version "1.4.1")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "locust" version))
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(sha256
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(base32
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"1q2nza37fwsqf8qdmisfz6bmjpss90shi1bajrclf6gkbslhryxl"))))
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(build-system python-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(add-before 'check 'extend-PATH
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;; Add the 'locust' script to PATH, which is used in the test
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;; suite.
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(lambda* (#:key outputs #:allow-other-keys)
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(let ((out (assoc-ref outputs "out")))
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(setenv "PATH" (string-append out "/bin:"
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(getenv "PATH"))))
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#t))
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(replace 'check
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(lambda _
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(invoke "python" "-m" "pytest"
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"-k" (string-join
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(list
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;; These tests return "non-zero exit status 1".
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"not test_default_headless_spawn_options"
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"not test_default_headless_spawn_options_with_shape"
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"not test_headless_spawn_options_wo_run_time"
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;; This test depends on networking.
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"not test_web_options"
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;; This test fails because of the warning "System open
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;; file limit '1024' is below minimum setting '10000'".
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"not test_skip_logging") " and "))
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#t)))))
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(propagated-inputs
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`(("python-configargparse" ,python-configargparse)
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("python-flask" ,python-flask)
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("python-flask-basicauth" ,python-flask-basicauth)
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("python-gevent" ,python-gevent)
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("python-geventhttpclient" ,python-geventhttpclient)
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("python-msgpack" ,python-msgpack)
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("python-psutil" ,python-psutil)
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("python-pyzmq" ,python-pyzmq)
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("python-requests" ,python-requests)
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("python-werkzeug" ,python-werkzeug)))
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(native-inputs
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`(("python-mock" ,python-mock)
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("python-pyquery" ,python-pyquery)
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("python-pytest" ,python-pytest))) ;for more easily skipping tests
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(home-page "https://locust.io/")
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(synopsis "Distributed load testing framework")
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(description "Locust is a performance testing tool that aims to be easy to
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use, scriptable and scalable. The test scenarios are described in plain
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Python. It provides a web-based user interface to visualize the results in
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real-time, but can also be run non-interactively. Locust is primarily geared
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toward testing HTTP-based applications or services, but it can be customized to
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test any system or protocol.")
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(license license:expat)))
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