guix/guix
Ricardo Wurmus f431d5e299
guix: Upgrade to Bioconductor 3.10.
* guix/build-system/r.scm (bioconductor-uri): Switch to version 3.10.
* guix/import/cran.scm (%bioconductor-version): Same.
2019-12-15 15:38:51 +01:00
..
build emacs-build-system: Ensure the core libraries appear last in the load path. 2019-12-13 10:48:28 +09:00
build-system guix: Upgrade to Bioconductor 3.10. 2019-12-15 15:38:51 +01:00
import guix: Upgrade to Bioconductor 3.10. 2019-12-15 15:38:51 +01:00
scripts challenge: Fix type mismatch when comparing to a local hash. 2019-12-15 00:34:05 +01:00
store daemon: Invoke 'guix gc --list-busy' instead of 'list-runtime-roots'. 2019-09-08 11:49:24 +02:00
tests challenge: Add "--diff". 2019-12-12 17:56:58 +01:00
base16.scm
base32.scm
base64.scm base64: Do not use (rnrs). 2019-12-15 00:34:05 +01:00
build-system.scm
bzr-download.scm download: Pass 'http_proxy' et al. to git, hg, etc. 2019-09-05 18:33:30 +02:00
cache.scm
channels.scm channels: Refer to 'guile-json-3'. 2019-10-27 23:05:01 +01:00
ci.scm ci: Use (guix json) and adjust for Guile-JSON 3.x. 2019-09-04 13:02:27 +02:00
colors.scm colors: Add 'dim'. 2019-09-25 15:46:47 +02:00
combinators.scm
config.scm.in Add (guix lzlib). 2019-05-06 23:21:33 +02:00
cpio.scm
cve.scm cve: Rewrite to read the JSON feed instead of the XML feed. 2019-10-23 16:40:17 +02:00
cvs-download.scm download: Pass 'http_proxy' et al. to git, hg, etc. 2019-09-05 18:33:30 +02:00
deprecation.scm deprecation: Use the 'warning' procedure for diagnostics. 2019-06-03 23:18:47 +02:00
derivations.scm derivations: Add 'derivation-input-fold'. 2019-12-07 00:29:41 +01:00
describe.scm describe: Add 'current-profile-date'. 2019-03-17 22:55:01 +01:00
diagnostics.scm diagnostics: Avoid highlighting complete messages. 2019-08-28 18:52:52 +02:00
discovery.scm discovery: 'scheme-files' ignores hidden files. 2019-07-26 21:49:25 +02:00
docker.scm pack: Provide a meaningful "repository name" for Docker. 2019-09-16 10:25:31 +02:00
download.scm Merge branch 'master' into core-updates 2019-07-17 15:51:10 +02:00
elf.scm
ftp-client.scm Remove most uses of the _IO*F constants. 2019-01-09 14:47:53 +01:00
gexp.scm gexp: 'local-file' properly resolves non-literal relative file names. 2019-11-30 23:50:40 +01:00
git-download.scm download: Pass 'http_proxy' et al. to git, hg, etc. 2019-09-05 18:33:30 +02:00
git.scm git: Add 'commit-difference'. 2019-09-23 10:38:43 +02:00
glob.scm glob: Add an extra glob pattern compilation stage. 2018-03-18 22:57:17 +01:00
gnu-maintenance.scm upstream: Move KDE updater into a separate module. 2019-09-10 19:04:06 +02:00
gnupg.scm gnupg: Change default keyserver. 2018-09-25 18:45:50 +02:00
grafts.scm grafts: 'references-oracle' now takes a derivation input. 2019-07-02 18:33:51 +02:00
graph.scm
hg-download.scm download: Pass 'http_proxy' et al. to git, hg, etc. 2019-09-05 18:33:30 +02:00
http-client.scm Remove most uses of the _IO*F constants. 2019-01-09 14:47:53 +01:00
i18n.scm ui: Introduce (guix i18n). 2017-11-08 22:31:58 +01:00
inferior.scm inferior: 'cached-channel-instance' takes an open store connection. 2019-11-15 23:28:17 +01:00
json.scm Add (guix json). 2019-09-04 13:02:27 +02:00
licenses.scm licenses: Add Historical Permission Notice and Disclaimer license 2019-06-20 18:24:49 +02:00
lint.scm lint: archival: Gracefully handle network failures. 2019-12-02 12:24:56 +01:00
lzlib.scm lzlib: 'make-lzip-input-port' better handles end of decompression. 2019-06-01 15:26:30 +02:00
man-db.scm profiles: Use 'with-extensions'. 2018-06-01 15:21:28 +02:00
memoization.scm memoization: Add 'invalidate-memoization!. 2017-12-13 23:11:53 +01:00
modules.scm Remove traces of "GuixSD". 2019-03-13 23:12:43 +01:00
monad-repl.scm
monads.scm monads, gexp: Prevent redefinition of syntax parameters. 2019-02-06 23:06:18 +01:00
nar.scm nar: Really lock store files. 2019-06-05 23:10:37 +02:00
packages.scm packages: Add "aarch64-linux" to '%hydra-supported-systems'. 2019-10-20 23:26:50 +02:00
pki.scm Switch to Guile-Gcrypt. 2018-09-04 17:25:11 +02:00
profiles.scm profiles: Use 'getpwuid' when $USER and $LOGNAME are undefined. 2019-12-10 20:56:06 +01:00
profiling.scm profiling: Add a "gc" profiling component. 2019-01-15 20:24:08 +01:00
progress.scm progress: Add 'progress-report-port'. 2019-12-12 17:56:58 +01:00
records.scm records: Support custom 'this' identifiers. 2019-03-30 11:08:39 +01:00
remote.scm remote, ssh: Show the command exit status upon failure. 2019-08-28 18:52:52 +02:00
repl.scm repl, marionette: 'self-quoting?' matches keywords. 2019-09-23 23:41:19 +02:00
scripts.scm scripts: GC hint suggests 'guix gc -d 1m'. 2019-04-10 17:09:47 +02:00
search-paths.scm search-paths: Add 'set-search-paths'. 2018-05-10 14:53:57 +02:00
self.scm Merge branch 'master' into core-updates 2019-09-27 19:11:27 +02:00
serialization.scm serialization: Remove unused procedure. 2019-12-12 17:56:58 +01:00
sets.scm
ssh.scm ssh: 'open-ssh-session' can be passed the expected host key. 2019-12-04 18:16:08 +01:00
status.scm colors: Introduce a disjoint type and pre-compute ANSI escapes. 2019-04-11 18:18:13 +02:00
store.scm Use 'offload?' instead of 'build-hook?' internally. 2019-11-26 00:16:36 +01:00
svn-download.scm guix: svn: Allow dropping externals. 2019-11-13 22:49:47 +01:00
swh.scm Add (guix json). 2019-09-04 13:02:27 +02:00
tests.scm packages: Remove 'search-bootstrap-binary'. 2019-06-14 21:57:39 +02:00
ui.scm ui: 'with-profile-lock' keeps going upon ENOLCK. 2019-11-29 15:54:20 +01:00
upstream.scm refresh: Distinguish between "no updater" and "failing updater". 2019-09-10 00:34:40 +02:00
utils.scm utils: Use target-aarch64? and target-arm? helpers. 2019-11-22 16:33:42 +01:00
workers.scm workers: Display backtrace in pre-unwind handler. 2017-11-17 10:47:56 +01:00
zlib.scm zlib: Fix race condition when closing gzip ports. 2017-11-19 23:09:01 +01:00