guix/gnu/packages
Ricardo Wurmus b4cf3fde74
gnu: r-seurat: Update to 5.0.0.
* gnu/packages/cran.scm (r-seurat): Update to 5.0.0.
[propagated-inputs]: Add r-fastdummies, r-generics, r-lifecycle, r-rcpphnsw, and
r-rspectra.

Change-Id: If728a0340cdeec5c2d5671025711a2ed42ee265b
2023-11-15 15:55:22 +01:00
..
aux-files gnu: Add linux-libre 6.6.1. 2023-07-23 22:26:01 -04:00
patches gnu: ucx: Update to 1.15.0. 2023-11-15 11:36:20 +01:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm gnu: spindle: Update to 0.13; remove input labels. 2023-11-15 11:36:21 +01:00
adns.scm
agda.scm gnu: agda-1lab: Update to 549fdb1c948a975e90e70f871993a4a4239aa280. 2023-11-14 13:47:53 +01:00
aidc.scm
algebra.scm gnu: symengine: Update to 0.11.1. 2023-11-03 19:25:31 -03:00
android.scm
animation.scm
anthy.scm
antivirus.scm
apl.scm
apparmor.scm
apple.scm
apr.scm
arcan.scm
aspell.scm
assembly.scm
astronomy.scm gnu: python-asdf: Update to 3.0.0. 2023-11-05 18:09:36 +00:00
attr.scm
audio.scm
augeas.scm
authentication.scm
autogen.scm
autotools.scm
avahi.scm
avr-xyz.scm
avr.scm
axoloti.scm
backup.scm
barrier.scm
base.scm
bash.scm
batik.scm
bdw-gc.scm
benchmark.scm gnu: intel-mpi-benchmarks: Update to 2021.3. 2023-11-15 11:36:20 +01:00
bioconductor.scm gnu: r-abn: Update to 3.0.3. 2023-11-15 15:55:20 +01:00
bioinformatics.scm gnu: Add r-illuminahumanmethylationepicmanifest. 2023-11-13 14:46:51 +01:00
bison.scm
bittorrent.scm
books.scm
boost.scm gnu: mdds: Update to 2.1.1. 2023-11-07 12:33:26 -05:00
bootloaders.scm
bootstrap.scm
bqn.scm
browser-extensions.scm gnu: ublock-origin: Update to 1.53.2. 2023-11-10 12:04:12 +01:00
build-tools.scm
busybox.scm
c.scm
calcurse.scm
calendar.scm
ccache.scm gnu: ccache: Enable building on more architectures. 2023-11-08 21:26:51 +02:00
cdrom.scm
cedille.scm
certs.scm
check.scm
chemistry.scm
chez.scm
chicken.scm
chromium.scm
ci.scm
cinnamon.scm
clojure.scm
cluster.scm gnu: drbd-utils: Enable building on more architectures. 2023-11-08 21:42:45 +02:00
cmake.scm
cobol.scm
code.scm gnu: Have vim packages use vim-build-system. 2023-11-08 12:09:28 +02:00
commencement.scm
compression.scm
compton.scm
configuration-management.scm
conky.scm
connman.scm
containers.scm
convmv.scm
cook.scm
coq.scm
cpio.scm
cpp.scm gnu: Add frozen. 2023-11-07 22:35:31 -05:00
cppi.scm
cran.scm gnu: r-seurat: Update to 5.0.0. 2023-11-15 15:55:22 +01:00
crates-graphics.scm
crates-gtk.scm
crates-io.scm gnu: Add rust-blake2-0.10. 2023-11-05 12:22:39 +02:00
cross-base.scm
crypto.scm
cryptsetup.scm
cups.scm
curl.scm
cvassistant.scm
cybersecurity.scm
cyrus-sasl.scm
darwin.scm
databases.scm gnu: soci: Add PIE flag. 2023-11-14 23:46:08 +01:00
datamash.scm
datastructures.scm
dav.scm
dbm.scm
dc.scm
debian.scm
debug.scm
dejagnu.scm
dezyne.scm gnu: dezyne: Update to 2.17.8. 2023-11-08 16:48:51 +01:00
dhall.scm
dico.scm
dictionaries.scm
diffoscope.scm
digest.scm
direct-connect.scm
disk.scm
display-managers.scm
distributed.scm
django.scm
djvu.scm
dlang.scm
dns.scm
docbook.scm
docker.scm
documentation.scm
dvtm.scm
easyrpg.scm
ebook.scm
ed.scm
education.scm
efi.scm
electronics.scm
elf.scm
elixir.scm
elm.scm
emacs-xyz.scm gnu: emacs-slime: Update to 2.28-1.735258a. 2023-11-15 15:17:04 +01:00
emacs.scm
embedded.scm
emulators.scm
enchant.scm
engineering.scm
enlightenment.scm
entr.scm
erlang.scm
esolangs.scm
fabric-management.scm gnu: ucx: Update to 1.15.0. 2023-11-15 11:36:20 +01:00
fcitx.scm
fcitx5.scm
figlet.scm
file-systems.scm
file.scm
finance.scm
firmware.scm
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm gnu: font-google-noto: Update to 23.11.1. 2023-11-05 18:08:20 +00:00
fontutils.scm
forth.scm
fpga.scm
freedesktop.scm
freeipmi.scm
fribidi.scm
fsf.scm
ftp.scm
fvwm.scm
game-development.scm
games.scm
gawk.scm
gcal.scm
gcc.scm
gd.scm
gdb.scm
genealogy.scm
genimage.scm
geo.scm gnu: josm: Update to 18822. 2023-11-09 19:09:08 +01:00
gettext.scm
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm
glib.scm
gnome-xyz.scm
gnome.scm
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm
gnupg.scm
gnustep.scm
gnuzilla.scm gnu: icecat: honor parallel-job-count. 2023-11-13 22:50:01 -06:00
gobby.scm
golang-check.scm
golang.scm
gperf.scm
gpodder.scm
gps.scm
graph.scm
graphics.scm
graphviz.scm
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm
gtk.scm
guile-wm.scm
guile-xyz.scm gnu: guile-prometheus: Update to 0-6.4aaf902. 2023-11-12 14:06:18 +00:00
guile.scm
gv.scm
gxmessage.scm
hardware.scm gnu: openrgb: Fix up chmod invocations inside udev rules. 2023-11-12 23:23:20 +01:00
haskell-apps.scm
haskell-check.scm
haskell-crypto.scm
haskell-web.scm
haskell-xyz.scm gnu: Add ghc-text-icu. 2023-11-14 13:30:45 +01:00
haskell.scm
haxe.scm
heads.scm
hexedit.scm
high-availability.scm
hugs.scm
hunspell.scm
hurd.scm
hyperledger.scm
i2p.scm
ibus.scm
icu4c.scm
idris.scm
idutils.scm
image-processing.scm gnu: insight-toolkit-4.12: Fix building. 2023-11-14 08:57:48 +02:00
image-viewers.scm
image.scm
imagemagick.scm
inklingreader.scm
inkscape.scm
installers.scm
instrumentation.scm
ipfs.scm
irc.scm
irods.scm
iso-codes.scm
jami.scm
java-bootstrap.scm
java-compression.scm
java-graphics.scm
java-maths.scm
java-rdf.scm
java-xml.scm
java.scm gnu: Add java-parsson. 2023-11-09 19:08:59 +01:00
javascript.scm
jemalloc.scm
jose.scm
julia-jll.scm
julia-xyz.scm
julia.scm
jupyter.scm
kawa.scm
kde-frameworks.scm
kde-games.scm
kde-internet.scm
kde-multimedia.scm
kde-pim.scm
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm
kde.scm
kerberos.scm
kodi.scm
language.scm
ld-wrapper.in
lean.scm
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm gnu: libreoffice: Update to 7.6.3.1. 2023-11-07 22:35:32 -05:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm
license.scm
lighting.scm
linphone.scm
linux.scm gnu: psm2: Update to 12.0. 2023-11-15 11:36:20 +01:00
lirc.scm
lisp-check.scm gnu: cl-lift: Update to 1.7.1-3.a794184. 2023-11-09 14:01:28 +01:00
lisp-xyz.scm gnu: cl-slime-swank: Update to 2.28-1.735258a. 2023-11-15 15:17:04 +01:00
lisp.scm gnu: Have vim packages use vim-build-system. 2023-11-08 12:09:28 +02:00
llvm.scm gnu: Add lld-17. 2023-11-12 08:49:46 +02:00
logging.scm
logo.scm
loko.scm
lout.scm
lsof.scm
lua.scm
lxde.scm
lxqt.scm
m4.scm
machine-learning.scm gnu: python-deepxde: Update to 1.10.0. 2023-11-03 19:25:36 -03:00
magic-wormhole.scm
mail.scm gnu: Have vim packages use vim-build-system. 2023-11-08 12:09:28 +02:00
make-bootstrap.scm
man.scm
markup.scm gnu: lowdown: Update to 1.1.0. 2023-11-11 08:36:31 +08:00
marst.scm
mastodon.scm
mate.scm
maths.scm
matrix.scm
maven-parent-pom.scm
maven.scm
mc.scm
mcrypt.scm
medical.scm
mercury.scm
mes.scm gnu: Remove m2-planet-1.9.0. 2023-11-11 07:34:57 +01:00
messaging.scm gnu: tdlib: Update to 1.8.20. 2023-11-07 21:06:10 +04:00
microcom.scm
minetest.scm
mingw.scm
moe.scm
mold.scm
monitoring.scm
moreutils.scm
motti.scm
mp3.scm
mpd.scm
mpi.scm gnu: openmpi: Update to 4.1.6. 2023-11-15 11:36:20 +01:00
mtools.scm
multiprecision.scm
music.scm
musl.scm
myrddin.scm
nano.scm
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: Add ngtcp2. 2023-11-12 16:43:48 +01:00
nfs.scm
nickle.scm
nicotine.scm
nim.scm
ninja.scm
node-xyz.scm
node.scm gnu: node-lts: Update to 18.18.2. 2023-11-05 12:37:18 +01:00
notcurses.scm
noweb.scm
nss.scm
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm
opencog.scm
openkinect.scm
openldap.scm
openpgp.scm
openstack.scm
orange.scm
orpheus.scm
ots.scm
package-management.scm gnu: nar-herder: Update to 0-22.bf539aa. 2023-11-12 14:12:27 +00:00
pantheon.scm
parallel.scm gnu: slurm: Add 23.02.6. 2023-11-15 11:36:19 +01:00
pascal.scm
password-utils.scm gnu: password-store: Add missing ‘tail’ input. 2023-11-04 00:52:38 +01:00
patchutils.scm
patool.scm
pciutils.scm
pcre.scm
pdf.scm gnu: capypdf: Update to 0.6.0. 2023-11-11 06:47:17 +01:00
pem.scm
pep.scm
perl-check.scm
perl-compression.scm
perl-maths.scm
perl-web.scm
perl.scm
perl6.scm
phabricator.scm
photo.scm
php.scm
piet.scm
pikchr.scm
pkg-config.scm
plan9.scm
plotutils.scm
poedit.scm
polkit.scm
popt.scm
potassco.scm
presentation.scm
pretty-print.scm
printers.scm
profiling.scm
prolog.scm
protobuf.scm
pth.scm
pulseaudio.scm
pumpio.scm
pure.scm
purescript.scm
pv.scm
pypy.scm
python-build.scm
python-check.scm gnu: python-pytest-astropy: Update to 0.11.0. 2023-11-05 18:09:36 +00:00
python-compression.scm
python-crypto.scm
python-science.scm gnu: python-pytensor: Update to 2.17.3. 2023-11-03 19:25:36 -03:00
python-web.scm
python-xyz.scm gnu: python-pikepdf: Fix embedded version string. 2023-11-04 19:05:28 +08:00
python.scm
qt.scm
racket.scm
radio.scm gnu: sdrangel: Update to 7.17.0. 2023-11-10 10:43:07 +01:00
ragel.scm
rails.scm
raspberry-pi.scm
ratpoison.scm
rcm.scm
rdesktop.scm
rdf.scm
re2c.scm
readline.scm
rednotebook.scm
regex.scm
robotics.scm
rocm.scm
rpc.scm
rpm.scm
rrdtool.scm
rsync.scm
ruby.scm gnu: ruby: Fix cross-compilation. 2023-11-12 14:14:56 +00:00
rush.scm
rust-apps.scm gnu: Have vim packages use vim-build-system. 2023-11-08 12:09:28 +02:00
rust.scm
sagemath.scm
samba.scm
sawfish.scm
scanner.scm
scheme.scm
screen.scm
scribus.scm
scsi.scm
sdl.scm
search.scm
security-token.scm
selinux.scm
sequoia.scm
serialization.scm
serveez.scm
shells.scm
shellutils.scm
simh.scm
simulation.scm
skarnet.scm
skribilo.scm
slang.scm
smalltalk.scm
sml.scm
solidity.scm
sourcehut.scm
speech.scm
sphinx.scm
spice.scm
spreadsheet.scm
sqlite.scm
squirrel.scm
ssh.scm
sssd.scm
statistics.scm gnu: python-pymc: Update to 5.9.1. 2023-11-03 19:25:36 -03:00
stb.scm
stenography.scm
storage.scm
suckless.scm
sugar.scm
swig.scm
sycl.scm
sync.scm
syncthing.scm
syndication.scm
synergy.scm
task-management.scm
task-runners.scm
tbb.scm
tcl.scm
telegram.scm
telephony.scm
terminals.scm
terraform.scm
tex.scm
texinfo.scm
texlive.scm
text-editors.scm
textutils.scm
time.scm
tls.scm
tmux.scm
toolkits.scm
tor.scm gnu: tor: Update to 0.4.8.8 [fixes TROVE-2023-004]. 2023-11-09 08:45:09 +02:00
toys.scm
tree-sitter.scm
tryton.scm
tv.scm
uglifyjs.scm
uml.scm
unicode.scm
unrtf.scm
upnp.scm
usb-modeswitch.scm
uucp.scm
valgrind.scm
version-control.scm gnu: git-lfs: Support building on more systems. 2023-11-08 09:27:24 +02:00
video.scm gnu: ffmpeg-2.8: Update to 2.8.22. 2023-11-14 08:16:52 +02:00
vim.scm gnu: Have vim packages use vim-build-system. 2023-11-08 12:09:28 +02:00
virtualization.scm
vlang.scm
vnc.scm
vpn.scm
vulkan.scm
w3m.scm
wdiff.scm
weather.scm
web-browsers.scm gnu: nyxt: Update to 3.9.2. 2023-11-15 15:17:04 +01:00
web.scm gnu: lighttpd: Update to 1.4.73. 2023-11-12 14:14:22 +00:00
webkit.scm
wget.scm
wine.scm
wireservice.scm
wm.scm gnu: icewm: Update to 3.4.4 2023-11-11 08:09:11 +08:00
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm
xfce.scm
xfig.scm
xiph.scm
xml.scm
xnee.scm
xorg.scm
zig-xyz.scm
zig.scm
zile.scm
zwave.scm