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* gnu/packages/patches/hmmer-remove-cpu-specificity.patch: New file. * gnu/packages/bioinformatics.scm (hmmer): Use it.
22 lines
953 B
Diff
22 lines
953 B
Diff
This patch removes compilation flags which make the build for the machine
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where compilation takes place, rendering the build not reproducible.
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diff --git a/configure b/configure
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index 8b6aaef..49a6afc 100755
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--- a/configure
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+++ b/configure
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@@ -6125,14 +6125,6 @@ fi # guess arch
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if test "x$ax_gcc_arch" != x -a "x$ax_gcc_arch" != xno; then
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for arch in $ax_gcc_arch; do
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- if test "x$acx_maxopt_portable" = xyes; then # if we require portable code
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- flags="-mtune=$arch"
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- # -mcpu=$arch and m$arch generate nonportable code on every arch except
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- # x86. And some other arches (e.g. Alpha) don't accept -mtune. Grrr.
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- case $host_cpu in i*86|x86_64*) flags="$flags -mcpu=$arch -m$arch";; esac
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- else
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- flags="-march=$arch -mcpu=$arch -m$arch"
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- fi
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for flag in $flags; do
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as_CACHEVAR=`$as_echo "ax_cv_check_cflags__$flag" | $as_tr_sh`
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{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether C compiler accepts $flag" >&5
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