guix/gnu/packages
Ricardo Wurmus bcdc61bfa1
gnu: tophat: Hide default GCC.
* gnu/packages/bioinformatics.scm (tophat)[arguments]: Add build phase
"hide-default-gcc".
2020-08-12 21:55:06 +02:00
..
aux-files gnu: linux-libre: Fix typo in the configuration for 5.7 on x86_64. 2020-08-10 11:32:05 -04:00
patches gnu: freedink-engine: Fix SDL hints. 2020-08-12 17:08:47 +02:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm gnu: facter: Update to 4.0.33. 2020-08-09 16:41:12 +02:00
adns.scm
agda.scm
aidc.scm
algebra.scm gnu: flint: Add a comment about the licence. 2020-08-08 21:22:39 +02:00
android.scm gnu: android-liblog: Install headers. 2020-08-11 13:12:28 +02:00
animation.scm gnu: pencil2d: Update to 0.6.5. 2020-08-09 16:41:16 +02:00
anthy.scm
antivirus.scm gnu: clamav: Update to 0.102.4. 2020-07-19 02:19:30 +02:00
apl.scm
apr.scm
arcan.scm
aspell.scm
assembly.scm gnu: rgbds: Update to 0.4.1. 2020-07-23 16:25:10 +02:00
astronomy.scm
attr.scm
audio.scm gnu: snd: Update to 20.6. 2020-08-09 16:41:15 +02:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm
avahi.scm
avr.scm
axoloti.scm
backup.scm gnu: burp: Update to 2.3.32. 2020-08-11 22:26:14 +02:00
base.scm gnu: binutils-gold: build with canonical gcc:lib. 2020-08-06 09:04:13 +03:00
bash.scm
batik.scm
bdw-gc.scm
benchmark.scm gnu: fio: Update to 3.21. 2020-07-23 16:25:10 +02:00
bioconductor.scm gnu: r-nmf: Update to 0.23.0. 2020-08-12 13:57:10 +02:00
bioinformatics.scm gnu: tophat: Hide default GCC. 2020-08-12 21:55:06 +02:00
bison.scm gnu: bison: Mention yacc in the description. 2020-07-30 02:53:28 +02:00
bittorrent.scm gnu: libtorrent-rasterbar: Update to 1.2.8. 2020-08-11 16:25:04 +02:00
boost.scm
bootloaders.scm
bootstrap.scm
build-tools.scm
busybox.scm
c.scm
calcurse.scm
calendar.scm gnu: Add confclerk. 2020-08-05 13:10:14 +03:00
ccache.scm gnu: ccache: Update to 3.7.11. 2020-07-23 16:25:11 +02:00
cdrom.scm
cedille.scm
certs.scm
check.scm gnu: python-pytest-flakes: Update to 4.0.1. 2020-08-09 21:12:31 +02:00
chemistry.scm
chez.scm
chicken.scm
chromium.scm gnu: ungoogled-chromium: Update to 84.0.4147.105-0.cc3e311. 2020-07-30 00:57:26 +02:00
ci.scm gnu: cuirass: Update to 0.0.1-42.d332955. 2020-08-02 19:19:56 +02:00
cinnamon.scm
clojure.scm
cluster.scm
cmake.scm
cobol.scm
code.scm
commencement.scm gnu: Add gdc-toolchain. 2020-07-19 20:23:37 +03:00
compression.scm gnu: innoextract: Update to 1.9. 2020-08-11 16:25:05 +02:00
compton.scm
configuration-management.scm gnu: Add chezmoi. 2020-08-09 17:22:26 +03:00
conky.scm gnu: conky: Update to 1.11.6. 2020-07-28 21:25:57 +02:00
connman.scm
convmv.scm
cook.scm
coq.scm
cpio.scm
cpp.scm gnu: Add rttr. 2020-08-11 10:59:04 +02:00
cppi.scm
cran.scm gnu: r-brms: Update to 2.13.5. 2020-08-12 13:57:14 +02:00
crates-io.scm gnu: rust-tokio-test-0.2: Don't skip build. 2020-08-04 21:08:00 +02:00
cross-base.scm
crypto.scm
cryptsetup.scm
cups.scm
curl.scm
cvassistant.scm
cybersecurity.scm
cyrus-sasl.scm
databases.scm gnu: python-alembic: Update to 1.4.2. 2020-08-09 21:12:32 +02:00
datamash.scm
datastructures.scm gnu: Add robin-map. 2020-07-31 13:38:37 -04:00
dav.scm
dbm.scm
dc.scm
debian.scm
debug.scm gnu: Add Remake. 2020-08-01 14:00:47 -05:00
dejagnu.scm
dhall.scm
dico.scm
dictionaries.scm gnu: grammalecte: Update to 1.11.0. 2020-07-26 17:00:38 +02:00
diffoscope.scm gnu: diffoscope: Update to 151. 2020-07-17 15:39:00 -07:00
digest.scm gnu: Update xxhash to 0.8.0. 2020-08-01 09:00:44 +02:00
direct-connect.scm
disk.scm gnu: Add hddtemp. 2020-08-06 12:28:29 +02:00
display-managers.scm
distributed.scm
django.scm gnu: python-django: Add optional inputs. 2020-07-23 12:25:11 +03:00
djvu.scm
dlang.scm
dns.scm gnu: dnsmasq: Update to 2.82. 2020-07-23 23:51:22 +02:00
docbook.scm
docker.scm
documentation.scm gnu: Add zeal. 2020-08-01 08:23:58 +02:00
drones.scm
dunst.scm
dvtm.scm
easyrpg.scm gnu: easyrpg-player: Update to 0.6.2.1. 2020-08-03 16:43:28 +03:00
ebook.scm
ed.scm
education.scm gnu: snap: Update to 6.1.4. 2020-08-07 10:53:57 +02:00
efi.scm
electronics.scm gnu: libsigrok: Remove unused input. 2020-07-25 18:47:55 +02:00
elf.scm Revert "gnu: patchelf: Update to 0.11." 2020-07-22 01:38:19 +02:00
elixir.scm gnu: elixir: Remove unused input. 2020-07-30 18:18:11 +02:00
elm.scm
emacs-xyz.scm gnu: Add emacs-explain-pause-mode. 2020-08-12 19:47:38 +03:00
emacs.scm gnu: emacs: Ignore empty XIM styles. 2020-08-03 12:26:02 +02:00
embedded.scm gnu: arm-none-eabi-toolchain: Fix compilation. 2020-07-28 10:43:43 +03:00
emulators.scm gnu: sameboy: Update to 0.13.5. 2020-08-06 21:28:24 +02:00
enchant.scm
engineering.scm gnu: Add libredwg. 2020-08-10 11:40:01 +02:00
enlightenment.scm gnu: terminology: Update to 1.8.1. 2020-08-12 14:21:41 +03:00
entr.scm
erlang.scm
fabric-management.scm
fcitx.scm
figlet.scm
file-systems.scm gnu: exfatprogs: Update to 1.0.4. 2020-08-10 01:36:16 +02:00
file.scm
finance.scm gnu: bitcoin-abc: Update to 0.21.12. 2020-08-11 22:26:14 +02:00
firmware.scm
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm gnu: Add font-catamaran. 2020-07-23 04:03:48 +05:30
fontutils.scm
forth.scm
fpga.scm gnu: nextpnr-ice40: Sort inputs alphabetically. 2020-08-11 16:11:43 +03:00
freedesktop.scm gnu: Add xdg-desktop-portal-gtk. 2020-07-27 12:06:36 +02:00
freeipmi.scm
fribidi.scm
ftp.scm
fvwm.scm
game-development.scm gnu: ode: Update to 0.16.2. 2020-08-06 16:55:12 +02:00
games.scm gnu: freedink-engine: Fix SDL hints. 2020-08-12 17:08:47 +02:00
gawk.scm
gcal.scm
gcc.scm gnu: gcc: Fix libstdc++ misconfiguration. 2020-07-24 14:21:30 +02:00
gd.scm gnu: perl-gd: Update to 2.72 [fixes CVE-2019-6977]. 2020-07-19 14:46:25 +02:00
gdb.scm
genealogy.scm
genimage.scm
geo.scm gnu: geos: Update to 3.8.1. 2020-08-11 22:26:14 +02:00
gettext.scm gnu: libtextstyle: Update to 0.21. 2020-07-27 20:46:19 +02:00
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm
glib.scm
gnome-xyz.scm
gnome.scm gnu: gnome-boxes: Update to 3.36.6. 2020-08-11 22:26:15 +02:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm gnu: gnunet-gtk: Update to 0.13.1. 2020-07-30 00:57:29 +02:00
gnupg.scm
gnustep.scm gnu: wmnd: Update to 0.4.18. 2020-08-04 12:04:32 -04:00
gnuzilla.scm gnu: icecat: Update to 68.11.0-guix0-preview1 [security-fixes]. 2020-07-28 14:12:31 -04:00
gobby.scm
golang.scm gnu: Add gopkg-in-errgo-fmt-errors. 2020-08-09 17:19:27 +03:00
gperf.scm
gpodder.scm
gps.scm gnu: gpscorrelate: Update to 2.0. 2020-07-24 15:02:01 +02:00
graph.scm
graphics.scm gnu: lib2geom: Update to commit 17e0d21f. 2020-08-08 23:54:32 -04:00
graphviz.scm
groff.scm gnu: roffit: Update to 0.12. 2020-08-05 11:34:35 +02:00
groovy.scm
gsasl.scm
gstreamer.scm
gtk.scm gnu: spread-sheet-widget: Update to 0.5. 2020-07-30 01:38:34 +02:00
guile-wm.scm
guile-xyz.scm gnu: nomad: Update to 0.2.0-alpha. 2020-08-01 20:03:46 +02:00
guile.scm gnu: guile-zlib: Declare a source file-name. 2020-08-06 16:25:19 +03:00
gv.scm
gxmessage.scm
hardware.scm
haskell-apps.scm gnu: git-annex: Update to 8.20200720.1. 2020-07-21 23:54:45 +02:00
haskell-check.scm
haskell-crypto.scm
haskell-web.scm
haskell-xyz.scm gnu: ghc-c2hs: Enable tests. 2020-08-06 09:04:13 +03:00
haskell.scm
heads.scm
hexedit.scm
hugs.scm
hurd.scm
hyperledger.scm
i2p.scm
ibus.scm
icu4c.scm
idris.scm
idutils.scm
image-processing.scm gnu: Add metapixel. 2020-08-06 12:04:58 +02:00
image-viewers.scm gnu: luminance-hdr: Update to 2.6.0. 2020-07-24 15:02:14 +02:00
image.scm gnu: libjpeg-turbo: Replace with 2.0.5 [fixes CVE-2020-13790]. 2020-08-03 17:10:33 -04:00
imagemagick.scm
inklingreader.scm
inkscape.scm
installers.scm
ipfs.scm gnu: go-ipfs: Update to 0.6.0. 2020-08-09 21:38:19 +02:00
irc.scm gnu: Add inspircd. 2020-08-03 22:12:41 -05:00
iso-codes.scm
jami.scm gnu: jami: Always remove contrib tarballs from the sources of Jami. 2020-08-06 00:01:50 -04:00
java-compression.scm
java-graphics.scm
java-maths.scm
java.scm gnu: java-jakarta-oro: Fix reproducibility issue. 2020-07-28 02:13:54 +02:00
javascript.scm
jemalloc.scm
jose.scm
jrnl.scm
julia-xyz.scm
julia.scm
jupyter.scm
kawa.scm
kde-frameworks.scm
kde-internet.scm
kde-multimedia.scm
kde-pim.scm
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm
kde.scm gnu: kdenlive: Update to 20.04.1. 2020-08-11 11:51:36 +02:00
kerberos.scm
key-mon.scm
kodi.scm
language.scm
ld-wrapper.in
lean.scm gnu: lean: Disable test cases for i686 and armhf. 2020-07-19 20:24:00 -05:00
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm
license.scm
lighting.scm
linphone.scm
linux.scm gnu: Add linux-libre-arm64-generic at version 5.4. 2020-08-11 15:36:51 -07:00
lirc.scm
lisp-xyz.scm gnu: Add hu.dwim.defclass-star. 2020-08-07 15:58:16 +02:00
lisp.scm gnu: sbcl: Update to 2.0.7. 2020-08-01 12:28:32 +02:00
llvm.scm gnu: clang-runtime-3.5: Fix build. 2020-08-11 17:54:49 +02:00
logging.scm gnu: spdlog: Update to 1.7.0. 2020-07-24 21:08:35 +02:00
logo.scm
lolcode.scm
lout.scm
lsof.scm
lua.scm
lxde.scm gnu: Update LXDE home page. 2020-07-29 13:07:25 +02:00
lxqt.scm
m4.scm
machine-learning.scm gnu: openfst: Update to 1.7.9. 2020-08-11 03:15:35 +02:00
magic-wormhole.scm
mail.scm gnu: dovecot: Update to 2.3.11.3 [security fixes]. 2020-08-12 15:28:17 +02:00
make-bootstrap.scm
man.scm
markup.scm
marst.scm
mastodon.scm gnu: Add python-mastodon-py. 2020-07-27 13:11:37 +03:00
mate.scm gnu: mate-panel: Update to 1.24.1. 2020-08-11 05:20:36 +02:00
maths.scm gnu: Add clapack. 2020-08-10 21:58:38 +02:00
matrix.scm
maven-parent-pom.scm
maven.scm gnu: Add maven-jar-plugin. 2020-07-17 04:21:18 +02:00
mc.scm gnu: mc: Update to 4.8.25. 2020-07-20 01:48:26 +02:00
mcrypt.scm
medical.scm
mercury.scm gnu: Add mercury. 2020-07-23 12:13:59 -05:00
mes.scm
messaging.scm gnu: gloox: Update to 1.0.24. 2020-07-29 18:35:58 +02:00
microcom.scm
mingw.scm
moe.scm
monitoring.scm gnu: fswatch: Update to 1.15.0. 2020-07-25 13:13:10 +02:00
mono.scm
moreutils.scm
motti.scm
mp3.scm gnu: mpg123: Update to 1.26.3. 2020-07-25 13:13:11 +02:00
mpd.scm gnu: MPD: Update to 0.21.25. 2020-07-19 21:59:08 -04:00
mpi.scm
mtools.scm
multiprecision.scm
music.scm gnu: musescore: Update to 3.5. 2020-08-12 18:51:06 +02:00
musl.scm gnu: musl: Update to 1.2.1. 2020-08-11 16:25:06 +02:00
nano.scm gnu: nano: Update to 5.1. 2020-08-12 12:45:28 +02:00
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: fping: Update to 5.0. 2020-08-11 16:25:06 +02:00
nfs.scm gnu: Add nfs4-acl-tools. 2020-07-30 00:57:27 +02:00
nickle.scm
nim.scm
ninja.scm
node-xyz.scm
node.scm
noweb.scm
nss.scm
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm gnu: opam: Fix tests. 2020-07-30 18:18:12 +02:00
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm
opencog.scm
openkinect.scm
openldap.scm
openpgp.scm gnu: Add rnp. 2020-07-29 00:22:01 +02:00
openstack.scm
orpheus.scm
ots.scm
package-management.scm gnu: Add python-conda-package-handling. 2020-08-12 21:50:42 +02:00
pantheon.scm
parallel.scm gnu: parallel: Update to 20200722. 2020-07-23 23:51:22 +02:00
password-utils.scm gnu: hashcat: Update to 6.1.1. 2020-07-30 20:50:56 -04:00
patchutils.scm
pciutils.scm
pcre.scm
pdf.scm gnu: stapler: Update to 1.0.0. 2020-08-05 12:39:02 -04:00
pem.scm
pep.scm
perl-check.scm
perl-compression.scm gnu: perl-io-compress: Update to 2.095. 2020-07-26 20:45:02 +02:00
perl-web.scm
perl.scm
perl6.scm
phabricator.scm
photo.scm gnu: LibRaw: Update to 0.20.0 [fixes CVE-2020-15503]. 2020-07-24 21:08:34 +02:00
php.scm
pkg-config.scm
plotutils.scm gnu: asymptote: Update to 2.67. 2020-08-06 16:48:40 +02:00
poedit.scm
polkit.scm
popt.scm
presentation.scm
pretty-print.scm
printers.scm
profiling.scm
prolog.scm gnu: swi-prolog: Update to 8.3.5. 2020-08-07 20:56:47 -05:00
protobuf.scm gnu: python-protobuf: Update to 3.12.4. 2020-08-03 08:54:26 +02:00
pth.scm
pulseaudio.scm gnu: Add noisetorch. 2020-08-06 18:54:03 +02:00
pumpio.scm
pure.scm
purescript.scm
pv.scm
python-check.scm gnu: Add python-pytest-trio. 2020-08-09 14:53:20 +03:00
python-compression.scm gnu: Add python-brotli. 2020-07-21 10:49:31 +03:00
python-crypto.scm gnu: Add python-certipy. 2020-08-09 15:37:28 +03:00
python-science.scm gnu: Add python-bottleneck. 2020-08-10 11:49:56 +02:00
python-web.scm gnu: Add python-h2. 2020-08-06 16:00:42 +02:00
python-xyz.scm gnu: Add python-devtools. 2020-08-10 12:10:26 +02:00
python.scm
qt.scm gnu: qtserialbus: Add libsocketcan support. 2020-08-11 00:12:40 -04:00
radio.scm gnu: libosmo-dsp: Remove unused input. 2020-07-30 18:18:12 +02:00
ragel.scm
rails.scm
ratpoison.scm
rcm.scm
rdesktop.scm
rdf.scm gnu: Add python-cfgraph. 2020-08-09 15:33:03 +03:00
re2c.scm
readline.scm
rednotebook.scm
regex.scm gnu: re2: Update to 2020-07-06. 2020-07-24 21:08:35 +02:00
robotics.scm
rpc.scm
rrdtool.scm
rsync.scm
ruby.scm gnu: ruby-chunky-png: Update to 1.3.12. 2020-08-05 22:25:24 -04:00
rush.scm
rust-apps.scm gnu: Add watchexec. 2020-08-04 15:57:35 +02:00
rust.scm gnu: rust-1.45: Update to 1.45.2. 2020-08-03 18:00:29 +02:00
sagemath.scm
samba.scm
sawfish.scm
scanner.scm
scheme.scm gnu: racket: Update to 7.8. 2020-08-06 12:03:44 +02:00
screen.scm
scribus.scm
scsi.scm
sdcc.scm
sdl.scm
search.scm
security-token.scm gnu: ccid: Update to 1.4.33. 2020-07-24 21:08:36 +02:00
selinux.scm
sequoia.scm gnu: rust-proc-macro2: Don't include minor version in variable name. 2020-08-04 15:57:33 +02:00
serialization.scm
serveez.scm
shells.scm
shellutils.scm
simh.scm
simulation.scm
skarnet.scm gnu: s6-rc: Update to 0.5.1.4. 2020-07-27 04:25:29 +02:00
skribilo.scm gnu: guile-reader: Switch to Guile 3.0. 2020-07-27 12:06:36 +02:00
slang.scm
smalltalk.scm gnu: squeak-vm: Enter build directory once. 2020-07-25 13:55:57 +02:00
sml.scm gnu: polyml: Update to 5.8.1. 2020-07-22 23:54:52 -05:00
speech.scm gnu: sphinxbase: Fix building. 2020-07-29 12:45:36 +03:00
sphinx.scm
spice.scm
sqlite.scm
squirrel.scm
ssh.scm gnu: guile-ssh: Update to 0.13.0. 2020-07-20 23:25:09 +02:00
sssd.scm
stalonetray.scm
statistics.scm gnu: r-car: Update to 3.0-9. 2020-08-12 13:57:15 +02:00
stb.scm
stenography.scm
storage.scm
suckless.scm
swig.scm
sync.scm
syncthing.scm gnu: Add syncthing-gtk. 2020-07-25 18:47:55 +02:00
syndication.scm gnu: newsboat: Update to 2.20.1. 2020-07-26 19:20:24 +03:00
synergy.scm
task-management.scm
tbb.scm
tcl.scm
telephony.scm gnu: libtgvoip: Fix loading of shared libraries. 2020-08-07 21:12:35 -05:00
terminals.scm gnu: alacritty: Fix on Wayland. 2020-08-10 20:35:44 +02:00
terraform.scm
tex.scm
texinfo.scm
text-editors.scm gnu: texmacs: Update to 1.99.13. 2020-08-01 10:27:38 +02:00
textutils.scm gnu: libgtextutils: Hide default GCC. 2020-08-12 21:26:40 +02:00
time.scm gnu: python-pendulum: Update to 2.1.1. 2020-07-20 01:48:26 +02:00
tls.scm
tmux.scm
tor.scm
toys.scm
tryton.scm
tv.scm
uml.scm gnu: plantuml: Update to 1.2020.15. 2020-08-01 09:13:40 +02:00
unicode.scm
unrtf.scm
upnp.scm
usb-modeswitch.scm
uucp.scm
valgrind.scm
version-control.scm gnu: Add go-github-go-git. 2020-08-09 17:19:24 +03:00
video.scm gnu: mlt: Update to 6.22.1. 2020-08-10 11:35:47 +02:00
vim.scm gnu: neovim: Update to 0.4.4. 2020-08-06 12:19:16 +03:00
virtualization.scm gnu: bubblewrap: Build with Python 3. 2020-07-21 23:54:43 +02:00
visidata.scm
vlang.scm gnu: v: Remove unnecessary input. 2020-08-06 09:04:12 +03:00
vnc.scm gnu: libvnc: Update to 0.9.13. 2020-07-21 23:54:44 +02:00
vpn.scm
vulkan.scm
w3m.scm
wdiff.scm
web-browsers.scm gnu: links: Update to 2.21. 2020-08-11 22:26:16 +02:00
web.scm gnu: uhttpmock: Update to 0.5.3. 2020-08-11 23:36:34 +02:00
webkit.scm gnu: webkitgtk: Update to 2.28.4. 2020-07-28 18:31:28 -04:00
wget.scm
wicd.scm
wine.scm gnu: wine-staging: Update to 5.13. 2020-07-25 13:13:11 +02:00
wireservice.scm gnu: csvkit: Fix problem caused by the update of python-slugify. 2020-07-30 00:57:28 +02:00
wm.scm gnu: waybar: Update to 0.9.3. 2020-08-11 22:26:16 +02:00
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm gnu: sxhkd: Update to 0.6.2. 2020-08-11 22:26:15 +02:00
xfce.scm gnu: tumbler: Update to 0.2.9. 2020-08-11 22:26:15 +02:00
xfig.scm
xiph.scm gnu: ao: Update source URI. 2020-07-25 18:47:55 +02:00
xml.scm gnu: freexl: Update to 1.0.6. 2020-08-09 19:41:24 +02:00
xnee.scm
xorg.scm gnu: xpra: Update to 4.0.3. 2020-08-11 22:26:14 +02:00
zile.scm
zwave.scm