guix/gnu/packages/potassco.scm
Ricardo Wurmus 7d10e49dfc
gnu: python-clingraph: Update to 1.1.2.
* gnu/packages/potassco.scm (python-clingraph): Update to 1.1.2.

Change-Id: I5910853d39389ff9ad981543204fd8ef1445e495
2024-01-16 12:44:37 +01:00

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;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2022, 2023 Liliana Marie Prikler <liliana.prikler@gmail.com>
;;; Copyright © 2023 Simon Tournier <zimon.toutoune@gmail.com>
;;; Copyright © 2023 David Elsing <david.elsing@posteo.net>
;;; Copyright © 2024 Ricardo Wurmus <rekado@elephly.net>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages potassco)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (gnu packages)
#:use-module (guix gexp)
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix git-download)
#:use-module (guix gexp)
#:use-module (guix utils)
#:use-module (guix build-system cmake)
#:use-module (guix build-system emacs)
#:use-module (guix build-system python)
#:use-module (guix build-system pyproject)
#:use-module (gnu packages check)
#:use-module (gnu packages cpp)
#:use-module (gnu packages graphviz)
#:use-module (gnu packages libffi)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages python-build)
#:use-module (gnu packages python-web)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages sphinx))
(define-public libpotassco
;; No public release, update together with clasp
(let ((revision "1")
(commit "2f9fb7ca2c202f1b47643aa414054f2f4f9c1821"))
(package
(name "libpotassco")
(version (git-version "0.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/libpotassco")
(commit commit)))
(file-name (git-file-name name version))
(modules '((guix build utils)))
(snippet
#~(begin
(delete-file "tests/catch.hpp")
(substitute* (find-files "tests" "\\.cpp")
(("\"catch.hpp\"") "<catch/catch.hpp>"))))
(sha256
(base32
"1c32f9gqclf7qx07lpx8wd720vfhkjqhzc6nyy8mjmgwpmb3iyyn"))))
(arguments
`(#:configure-flags '("-DLIB_POTASSCO_BUILD_TESTS=on"
"-DLIB_POTASSCO_INSTALL_LIB=on"
"-DBUILD_SHARED_LIBS=on")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-cmake
(lambda _
(substitute* "CMakeLists.txt"
;; clasp expects lowercase potassco and include directory is
;; lowercase as well, so let's use that
(("\"cmake/Potassco\"") "\"cmake/potassco\"")
(("PotasscoConfig\\.cmake") "potassco-config.cmake")
(("PotasscoConfigVersion\\.cmake")
"potassco-config-version.cmake"))
(rename-file "cmake/PotasscoConfig.cmake.in"
"cmake/potassco-config.cmake.in"))))))
(build-system cmake-build-system)
(native-inputs (list catch2-1))
(home-page "https://potassco.org/")
(synopsis "Utility library for Potassco's projects")
(description "@code{libpotassco} is a utility library providing functions
and datatypes for
@itemize
@item parsing, writing, and converting logic programs in aspif and smodels
format,
@item passing information between a grounder and a solver,
@item and defining and parsing command-line options and for creating
command-line applications.
@end itemize
Furthermore, it comes with the tool @command{lpconvert} that converts either
between aspif and smodels format or to a human-readable text format.")
(license license:expat))))
(define-public clasp
(package
(name "clasp")
(version "3.3.9")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/clasp")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"163ps9zq7xppqy9hj5qnw6z5lcjnm4xf5fwjsavpia5ynm3hngcw"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags '("-DCLASP_BUILD_TESTS=on"
"-DCLASP_INSTALL_LIB=on"
"-DCLASP_USE_LOCAL_LIB_POTASSCO=off"
"-DBUILD_SHARED_LIBS=on")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-cmake
(lambda _
(substitute* "CMakeLists.txt"
;; Use lowercase to be consistent with libpotassco
(("\"cmake/Clasp\"") "\"cmake/clasp\"")
(("ClaspConfig\\.cmake") "clasp-config.cmake")
(("ClaspConfigVersion\\.cmake")
"clasp-config-version.cmake"))
(substitute* "cmake/ClaspConfig.cmake.in"
(("find_package\\(Potassco") "find_package(potassco"))
(rename-file "cmake/ClaspConfig.cmake.in"
"cmake/clasp-config.cmake.in"))))))
(inputs
(list libpotassco))
(home-page "https://potassco.org/")
(synopsis "Answer set solver")
(description "clasp is an answer set solver for (extended) normal and
disjunctive logic programs. The primary algorithm of clasp relies on
conflict-driven nogood learning, a technique that proved very successful for
satisfiability checking (SAT).")
(license license:expat)))
(define-public clingo
(package
(name "clingo")
(version "5.6.2")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/clingo")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(modules '((guix build utils)))
(snippet
#~(begin
(delete-file-recursively "clasp")
(delete-file-recursively "third_party")))
(sha256
(base32
"19s59ndcm2yj0kxlikfxnx2bmp6b7n31wq1zvwc7hyk37rqarwys"))))
(build-system cmake-build-system)
(arguments
(list
#:configure-flags #~`("-DCLINGO_BUILD_TESTS=on"
"-DCLINGO_INSTALL_LIB=on"
"-DCLINGO_BUILD_STATIC=off"
"-DCLINGO_BUILD_SHARED=on"
"-DCLINGO_USE_LOCAL_CLASP=off"
"-DCLINGO_USE_LOCAL_CATCH=off")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-cmake
(lambda _
(substitute* "CMakeLists.txt"
(("add_subdirectory\\(clasp\\)")
"find_package(clasp REQUIRED)")
(("add_subdirectory\\(third_party\\)")
(string-append
"find_package(tsl-hopscotch-map)\n"
"find_package(tl-optional)\n"
"find_package(mpark_variant)\n"
"find_package(tsl-sparse-map)\n"
"find_package(tsl-ordered-map)\n"
"find_package(Catch2 3 REQUIRED)")))
(substitute* "libclingo/CMakeLists.txt"
(("\"cmake/Clingo\"") "\"cmake/clingo\"")
(("ClingoConfig\\.cmake") "clingo-config.cmake")
(("ClingoConfigVersion\\.cmake")
"clingo-config-version.cmake"))
(substitute* "libgringo/CMakeLists.txt"
(("mpark::variant") "mpark_variant"))
(substitute* "cmake/ClingoConfig.cmake.in"
(("find_package\\(Clasp") "find_package(clasp"))
(rename-file "cmake/ClingoConfig.cmake.in"
"cmake/clingo-config.cmake.in")))
(add-after 'unpack 'skip-failing-tests
(lambda _
(with-directory-excursion "libclingo/tests"
(substitute* "CMakeLists.txt"
(("COMMAND test_clingo" all)
(string-append all
" -f "
"\"${CMAKE_CURRENT_SOURCE_DIR}/good.txt\"")))
(call-with-output-file "good.txt"
(lambda (port)
(for-each (lambda (test) (format port "~s~%" test))
'("parse-ast-v2" "add-ast-v2" "build-ast-v2"
"unpool-ast-v2" "parse_term"
"propagator" "propgator-sequence-mining"
"symbol" "visitor"))))))))))
(inputs (list catch2-3 clasp libpotassco))
(native-inputs (list mpark-variant
pkg-config
tl-optional
tsl-hopscotch-map
tsl-ordered-map
tsl-sparse-map))
(home-page "https://potassco.org/")
(synopsis "Grounder and solver for logic programs")
(description "Clingo computes answer sets for a given logic program.")
(license license:expat)))
(define-public clingo-dl
(package
(name "clingo-dl")
(version "1.4.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/clingo-dl")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0dncwj63vdm6958vb7355d5j9mdr7hm037j4z82yz6l77jg3sipw"))))
(build-system cmake-build-system)
(arguments (list #:tests? #f ; no tests
#:configure-flags #~`("-DPYCLINGODL_ENABLE=off")))
(inputs (list clingo))
(home-page "https://github.com/potassco/clingo-dl")
(synopsis "Solver for answer set programs modulo difference constraints")
(description "Clingo-DL is an extension to Clingo that models constraints
over difference logic.")
(license license:expat)))
(define-public plasp
(package
(name "plasp")
(version "3.1.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/plasp")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "123v1bjzh7yjwgcc5k55rkfz0lfl8ish5p3z8x3pn8k1svd50xal"))
(patches (search-patches
"plasp-fix-normalization.patch"
"plasp-include-iostream.patch"))))
(build-system cmake-build-system)
(arguments
(list #:tests? #f ; No test target
#:phases
#~(modify-phases %standard-phases
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(copy-recursively "bin"
(string-append (assoc-ref outputs "out")
"/bin")))))))
(inputs (list cxxopts mapbox-variant))
(home-page "https://potassco.org/")
(synopsis "ASP planning tools for PDDL")
(description "@command{plasp} is a tool collection for planning in
answer set programming. It supports a subset of PDDL 3.1 and SAS 3.")
(license license:expat)))
(define-public emacs-pasp-mode
(let ((commit "59385eb0e8ebcfc8c11dd811fb145d4b0fa3cc92")
(revision "1"))
(package
(name "emacs-pasp-mode")
(version (git-version "0.1.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/santifa/pasp-mode")
(commit commit)))
(file-name (git-file-name name version))
(patches
(search-patches "emacs-pasp-mode-quote-file-names.patch"))
(sha256
(base32
"1ar4vws3izzmir7m870mccci620ns3c5j26dcmwaxavhgw45wcmf"))))
(build-system emacs-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'defconst-version
(lambda _
(emacs-batch-edit-file "pasp-mode.el"
'(progn
(search-forward-regexp "(defcustom pasp-mode-version")
(forward-sexp)
(kill-sexp)
(backward-sexp)
(beginning-of-line)
(kill-sexp)
(insert (format "(defconst emacs-pasp-version \"%s\" %s)"
#$version (cadr kill-ring)))
(basic-save-buffer)))))
(add-after 'unpack 'hardcode-clingo
(lambda* (#:key inputs #:allow-other-keys)
(emacs-substitute-variables "pasp-mode.el"
("pasp-clingo-path"
(search-input-file inputs "/bin/clingo"))))))))
(inputs (list clingo))
(home-page "https://github.com/santifa/pasp-mode")
(synopsis "Major mode for editing answer set programs")
(description
"This package provides a major mode for editing answer set programs,
in particular ones that can be solved by @command{clingo}.")
(license license:gpl3+))))
(define-public python-clingo
(package
(inherit clingo)
(name "python-clingo")
(version (package-version clingo)) ; for #$version in arguments
(arguments
(substitute-keyword-arguments (package-arguments clingo)
((#:configure-flags flags #~'())
#~(cons* "-DCLINGO_BUILD_WITH_PYTHON=pip"
"-DCLINGO_USE_LIB=yes"
#$flags))
((#:imported-modules _ '())
`(,@%cmake-build-system-modules
(guix build python-build-system)))
((#:modules _ '())
'((guix build cmake-build-system)
((guix build python-build-system) #:prefix python:)
(guix build utils)))
((#:phases phases #~%standard-phases)
#~(modify-phases #$phases
(add-after 'unpack 'fix-failing-tests
(lambda _
(substitute* "libpyclingo/clingo/tests/test_conf.py"
(("ctl\\.solve\\(on_statistics=on_statistics\\)" all)
(string-append
all
"; self.skipTest(\"You shall not fail.\")")))))
(add-after 'install 'install-distinfo
(lambda* (#:key inputs outputs #:allow-other-keys)
(with-directory-excursion (python:site-packages inputs outputs)
(let ((dir (string-append "clingo-" #$version ".dist-info")))
(mkdir-p dir)
(call-with-output-file (string-append dir "/METADATA")
(lambda (port)
(format port "Metadata-Version: 1.1~%")
(format port "Name: clingo~%")
(format port "Version: ~a~%" #$version)))))))))))
(inputs (list clingo python-wrapper))
(propagated-inputs (list python-cffi))
(native-inputs (modify-inputs (package-native-inputs clingo)
(prepend python-scikit-build)))
(synopsis "Python bindings for clingo")
(description "This package provides Python bindings to the clingo package,
making it so that you can write @acronym{ASPs, Answer Set Programs} through
Python code.")))
(define-public python-clorm
(package
(name "python-clorm")
(version "1.4.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/clorm")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0jx99y71mrgdicn1da5dwz5nzgvvpabrikff783sg4shbv2cf0b5"))))
(build-system pyproject-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-before 'check 'fix-breaking-tests
(lambda _
;; noclingo tests rely on this being set
(setenv "CLORM_NOCLINGO" "1")
(delete-file "tests/test_mypy_query.py")
(substitute* "tests/test_clingo.py"
(("self\\.assertTrue\\(os_called\\)" all)
(string-append "# " all))))))))
(propagated-inputs (list python-clingo))
(native-inputs (list python-typing-extensions))
(home-page "https://potassco.org")
(synopsis "Object relational mapping to clingo")
(description "@acronym{Clorm, Clingo ORM} provides an @acronym{ORM,
Object Relational Mapping} interface to the @acronym{ASP, answer set
programming} solver clingo. Its goal is to make integration of clingo
into Python programs easier.")
(license license:expat)))
(define-public python-telingo
(package
(name "python-telingo")
(version "2.1.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/telingo")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(patches (search-patches "python-telingo-fix-comparison.patch"))
(sha256
(base32
"0g3khxfdzc2hc7dkiyyqhb399h6h21m5wkp6wy8w71n0m32fiy53"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-clingo))
(home-page "https://potassco.org/")
(synopsis "Solve dynamic temporal logic programs")
(description "This package provides a system to solve dynamic temporal
logic programs based on clingo.")
(license license:expat)))
(define-public python-clingraph
(package
(name "python-clingraph")
(version "1.1.2")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/clingraph")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"16q54rkwr84byzy27795rl9z08kcyxsg7lfk017yr8p5axh9a9rr"))))
(build-system pyproject-build-system)
(inputs (list dot2tex graphviz))
(propagated-inputs (list python-clingo
python-clorm
python-graphviz
python-imageio
python-jinja2
python-jsonschema
python-networkx))
(native-inputs (list dot2tex graphviz python-pylint python-pytest))
(home-page "https://github.com/potassco/clingraph")
(synopsis "Visualizer for graphs defined as logic programs")
(description
"This package provides a clingo-based visualizer for graphs defined
as logic programs.")
(license license:expat)))
(define-public python-clinguin
(package
(name "python-clinguin")
(version "1.0.0-beta")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/clinguin")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"032fnzxv6wl01sdq7n2k0ikajpmkg8ihjh5mck1mwjvmis8z16d4"))
(modules '((guix build utils)))
(snippet
#~(begin
(substitute* "setup.cfg"
;; Fun fact of the day
;; some typo squatter hosted
;; a package named tk
(("tk") "")
(("typing") "typing;python_version<\"3.5\""))))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-clingo
python-clorm
python-clingraph
python-fastapi
python-httpx
python-nbconvert
python-nbformat
python-nbsphinx
python-networkx
python-pillow
python-pydantic
`(,python "tk")
python-sphinx-rtd-theme
python-traitlets
python-uvicorn))
(home-page "https://github.com/potassco/clingraph")
(synopsis "Clingo-based interactive UI")
(description "Clinguin is a graphical user interface toolkit for clingo,
which allows user interfaces to be specified entirely as a logic program.")
(license license:expat)))