Ricardo Wurmus ffe16ef33c gnu: r-dexseq: Update to 1.28.1. ... * gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.1.		2019-01-12 23:35:16 +01:00
..
aux-files	gnu: linux-libre: Enable pressure stall information.	2019-01-09 22:59:58 -05:00
bootstrap
patches	gnu: kinit: Use KDEINIT5_LIBRARY_PATH to search for dynlibs.	2019-01-11 16:35:52 +01:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm	gnu: ansible: Work around issues with Guix wrapper scripts.	2018-12-18 11:20:56 +05:30
adns.scm
agda.scm
aidc.scm
algebra.scm	gnu: giac-xcas: Update to 1.5.0-29.	2018-12-29 10:06:36 +01:00
android.scm
animation.scm
anthy.scm
antivirus.scm
apl.scm
apr.scm
aspell.scm	gnu: hunspell-dict-en: Update to 2018-04-16.	2019-01-05 22:55:14 +02:00
assembly.scm	gnu: fasm: Update comments.	2019-01-09 19:33:28 +01:00
astronomy.scm	gnu: Stellarium: Update to 0.18.3.	2019-01-11 17:07:55 -05:00
attr.scm
audio.scm	gnu: ardour: Sort inputs and native-inputs.	2018-12-24 12:05:04 +02:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm	gnu: autoconf-archive: Update to 2019.01.06.	2019-01-07 11:19:06 +02:00
avahi.scm
avr.scm
axoloti.scm
backup.scm	gnu: libarchive: Replace with libarchive 3.3.3 and fix CVE-2018-{1000877,1000878,1000880}.	2019-01-07 05:42:34 +08:00
base.scm	gnu: glibc: Add patch implementing "pid/…" magic lookup on the Hurd.	2018-12-16 16:28:07 +01:00
bash.scm
batik.scm	gnu: Remove unnecessary build-side module imports.	2019-01-07 14:41:00 +01:00
bdw-gc.scm
benchmark.scm
bioconductor.scm
bioinformatics.scm	gnu: r-dexseq: Update to 1.28.1.	2019-01-12 23:35:16 +01:00
bison.scm
bittorrent.scm	gnu: aria2: Fix CVE-2019-3500.	2019-01-09 15:38:19 -05:00
boost.scm	gnu: Remove unnecessary build-side module imports.	2019-01-07 14:41:00 +01:00
bootloaders.scm	gnu: vboot-utils: Fix building on armhf-linux.	2019-01-03 15:40:27 -05:00
bootstrap.scm	gnu: Add dummy linker for arm-elf.	2019-01-07 16:39:35 +01:00
build-tools.scm
busybox.scm	gnu: Add toybox.	2018-12-12 09:27:17 +02:00
c.scm
calcurse.scm
calendar.scm	gnu: Remove unnecessary build-side module imports.	2019-01-07 14:41:00 +01:00
ccache.scm	ccache: Update to 3.5.	2018-11-30 00:21:25 -06:00
cdrom.scm	gnu: dvdisaster: Run regression tests.	2019-01-08 09:09:31 -06:00
certs.scm
check.scm	gnu: python-scripttest: Use pypi uri.	2019-01-05 22:55:13 +02:00
chemistry.scm	gnu: avogadro: Don't hardcode python version.	2018-12-17 12:08:05 +02:00
chez.scm	gnu: chez-sockets: Replace texlive input with minimal texlive-union.	2018-12-14 23:32:39 +01:00
ci.scm
cinnamon.scm
clojure.scm
cluster.scm
cmake.scm
cobol.scm
code.scm	gnu: global: Update to 6.6.3.	2019-01-06 15:42:02 +02:00
commencement.scm	gnu: commencement: Do not graft early bootstrap packages.	2018-12-24 18:18:24 +01:00
compression.scm	gnu: Move Java compression packages to new module.	2019-01-12 12:14:28 +01:00
compton.scm
conky.scm
connman.scm
cook.scm
coq.scm	gnu: Move coq packages from ocaml to coq.	2019-01-07 22:05:37 +01:00
cpio.scm
cpp.scm
cppi.scm
cran.scm	gnu: r-sjplot: Update to 2.6.2.	2019-01-12 23:35:16 +01:00
cross-base.scm	gnu: glibc: Add patch implementing "pid/…" magic lookup on the Hurd.	2018-12-16 16:28:07 +01:00
crypto.scm	gnu: opendht: Use jsoncpp and restbed.	2019-01-11 19:48:00 +01:00
cryptsetup.scm
cups.scm
curl.scm
cyrus-sasl.scm
databases.scm	gnu: r-rmysql: Move from databases.scm to cran.scm	2019-01-07 15:55:06 +01:00
datamash.scm	gnu: datamash: Update to 1.4.	2018-12-23 16:37:51 +02:00
datastructures.scm	gnu: Add sdsl-lite.	2019-01-07 11:56:14 +01:00
dav.scm	radicale: Update to 1.1.6.	2018-11-30 00:21:26 -06:00
dc.scm
debian.scm	gnu: debootstrap: Update to 1.0.111.	2018-12-01 23:34:43 +02:00
debug.scm
dejagnu.scm
dico.scm
dictionaries.scm	gnu: translate-shell: Wrap binary.	2018-12-25 22:05:51 +02:00
digest.scm
direct-connect.scm
disk.scm	gnu: Add rmlint.	2019-01-07 14:32:44 +01:00
display-managers.scm
django.scm	gnu: Django: Update to 1.11.18 [fixes CVE-2019-3498].	2019-01-09 15:44:36 -05:00
djvu.scm
dlang.scm
dns.scm	gnu: bind: Update to 9.12.3-P1.	2019-01-09 18:47:57 +01:00
docbook.scm
docker.scm	gnu: docker: Booby-trap "Command" and "LookPath" calls.	2019-01-10 21:29:53 +01:00
documentation.scm
dunst.scm
dvtm.scm
easyrpg.scm	gnu: Add easyrpg-player.	2018-12-09 09:17:02 +08:00
ebook.scm	gnu: calibre: Update to 3.35.0.	2018-12-08 15:55:54 +01:00
ed.scm
education.scm	gnu: gcompris-qt: Enable tests.	2018-12-24 22:19:40 +02:00
electronics.scm
elf.scm
elixir.scm
emacs.scm	Revert "gnu: emacs-ghub: Update to 3.2.0."	2019-01-11 13:32:31 +01:00
embedded.scm
emulators.scm	gnu: mame: Update to 0.205.	2018-12-29 08:29:48 +01:00
enchant.scm
engineering.scm	gnu: kicad: Don't hardcode version numbers.	2018-12-17 12:08:05 +02:00
enlightenment.scm	gnu: terminology: Update to 1.3.2.	2018-12-27 09:53:03 +02:00
entr.scm	gnu: entr: Fix typo in description.	2018-12-22 18:01:24 +03:00
erlang.scm
fabric-management.scm
fcitx.scm
figlet.scm
file-systems.scm
file.scm	gnu: file: Fix CVE-2018-10360.	2018-12-24 11:12:52 +02:00
finance.scm	gnu: python-duniterpy: Improve description.	2018-12-19 23:49:46 +01:00
firmware.scm	gnu: arm-trusted-firmware-sun50i-a64: Update to 2.0-2.98aab97.	2018-12-16 12:00:06 +02:00
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm	gnu: Add font-mononoki.	2018-12-24 16:20:32 +01:00
fontutils.scm
forth.scm
fpga.scm
freedesktop.scm	gnu: elogind: Update to 239.3.	2018-12-08 19:37:47 +01:00
freeipmi.scm
fribidi.scm
ftp.scm	gnu: filezilla: Update to 3.39.0.	2018-12-05 14:54:01 -05:00
fvwm.scm
game-development.scm	gnu: bullet: Update to 2.88.	2019-01-03 16:21:42 +02:00
games.scm	gnu: pingus: Update home page.	2018-12-23 23:22:19 +01:00
gawk.scm
gcal.scm
gcc.scm	gnu: GCC@7: Update to 7.4.0.	2018-12-08 19:37:47 +01:00
gd.scm
gdb.scm
geo.scm	gnu: Move R packages from geo.scm to cran.scm.	2019-01-07 15:55:06 +01:00
gettext.scm	gnu: po4a: Update to 0.55.	2019-01-05 22:55:13 +02:00
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm	gnu: Remove unnecessary build-side module imports.	2019-01-07 14:41:00 +01:00
glib.scm	gnu: Remove more GCC ICE workarounds.	2018-12-08 19:37:47 +01:00
gnome.scm	gnu: gexiv2: Update to 0.10.10.	2019-01-10 18:45:41 -05:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm	gnu: gnucash: Fix test failure.	2019-01-02 17:10:08 -05:00
gnunet.scm	gnu: guile-gnunet: Update to 0.0-1.d12167a.	2019-01-04 07:34:25 +08:00
gnupg.scm	gnu: gnupg: Update to 2.2.12.	2019-01-03 22:14:22 +02:00
gnustep.scm
gnuzilla.scm	gnu: Remove conkeror.	2018-12-23 22:14:15 +01:00
gobby.scm
golang.scm	gnu: Go 1.11: Update to 1.11.4 [fixes CVE-2018-{16873,16874}].	2018-12-16 16:24:12 -05:00
gperf.scm
gprolog.scm
gps.scm	gnu: gama: Update to 2.02.	2019-01-06 15:42:06 +02:00
graph.scm
graphics.scm	gnu: Blender: Update to a beta release of 2.80.	2019-01-09 18:54:16 -05:00
graphviz.scm
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm
gtk.scm
guile-wm.scm
guile.scm	gnu: Sort package modules in (gnu packages guile).	2019-01-12 12:14:31 +01:00
gv.scm
gxmessage.scm
ham-radio.scm	gnu: Add chirp.	2018-12-12 12:37:06 +05:30
hardware.scm
haskell-check.scm
haskell-crypto.scm
haskell-web.scm
haskell.scm	gnu: ghc-call-stack-boot: Make it a hidden package.	2018-12-14 16:14:46 +00:00
hexedit.scm
hugs.scm
hurd.scm
ibus.scm	gnu: librime: Remove bundled sources.	2018-12-25 08:51:01 +02:00
icu4c.scm
idris.scm
idutils.scm
image-processing.scm	gnu: Add nip2.	2019-01-06 00:22:05 +01:00
image-viewers.scm	gnu: viewnior: Don't use unstable tarball.	2018-12-27 15:33:58 +02:00
image.scm	gnu: Add slurp.	2019-01-07 08:31:14 +01:00
imagemagick.scm
inklingreader.scm
inkscape.scm
ipfs.scm	gnu: go-ipfs: Work around tar bomb.	2018-12-13 18:44:40 +01:00
irc.scm	gnu: irssi: Update to 1.1.2 [fixes CVE-2019-5882].	2019-01-10 16:05:42 -05:00
iso-codes.scm	gnu: python-iso3166: Update to 0.9.	2019-01-05 22:55:14 +02:00
java-compression.scm	gnu: Move Java compression packages to new module.	2019-01-12 12:14:28 +01:00
java.scm	gnu: Move Java compression packages to new module.	2019-01-12 12:14:28 +01:00
javascript.scm
jemalloc.scm
jose.scm	gnu: Add jose.	2019-01-07 10:15:37 +02:00
jrnl.scm
julia.scm
kde-frameworks.scm	gnu: kinit: Use KDEINIT5_LIBRARY_PATH to search for dynlibs.	2019-01-11 16:35:52 +01:00
kde.scm	gnu: Fix misplaced commas (unquotes).	2018-12-13 00:08:05 -05:00
kerberos.scm
key-mon.scm
kodi.scm	gnu: kodi: Update to 18.0rc3.	2018-12-27 09:35:46 +02:00
language.scm
ld-wrapper.in
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm	gnu: Remove unnecessary build-side module imports.	2019-01-07 14:41:00 +01:00
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm	gnu: libphidget: Update to 2.1.8.20180607.	2019-01-01 09:30:56 +02:00
libreoffice.scm	gnu: hunspell: Update to 1.7.0.	2019-01-05 22:55:14 +02:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm
license.scm
lighting.scm
linux.scm	gnu: linux-libre: Update to 4.20.1.	2019-01-09 23:00:07 -05:00
lirc.scm
lisp.scm	gnu: sbcl-trivial-clipboard: Update to 20181220.	2018-12-20 12:26:00 +01:00
llvm.scm	gnu: Fix top-level circular references between emacs.scm and llvm.scm.	2019-01-07 15:09:30 +01:00
logging.scm
lolcode.scm
lout.scm
lsof.scm
lua.scm	gnu: Add lua5.2-sec.	2019-01-08 15:23:36 +01:00
lxde.scm
lxqt.scm	gnu: Fix misplaced commas (unquotes).	2018-12-13 00:08:05 -05:00
m4.scm
machine-learning.scm	gnu: python2-fastlmm: Move to machine-learning.scm.	2019-01-07 14:41:01 +01:00
mail.scm	gnu: libetpan: Update to 1.9.2.	2018-12-23 23:22:20 +01:00
make-bootstrap.scm	gnu: glibc-stripped: Empty 'native-inputs' and 'propagated-inputs'.	2018-12-14 23:55:55 +01:00
man.scm	gnu: Add scdoc.	2018-12-20 08:59:36 +01:00
markup.scm
marst.scm
mate.scm
maths.scm	gnu: r-pracma: Update to 2.2.2.	2019-01-12 23:35:11 +01:00
maven.scm	gnu: maven-resolver: Update to 1.3.1.	2018-12-01 23:56:36 +01:00
mc.scm
mcrypt.scm
medical.scm
mes.scm	gnu: mes: Update to 0.19.	2018-12-16 19:58:31 +01:00
messaging.scm	gnu: prosody: Update to 0.11.1.	2019-01-08 15:23:36 +01:00
microcom.scm
mingw.scm
moe.scm	gnu: moe: Update to 1.10.	2019-01-06 15:42:06 +02:00
monitoring.scm	gnu: zabbix-agentd: Update to 4.0.2.	2018-12-17 22:09:11 +03:00
mono.scm
moreutils.scm
motti.scm
mp3.scm	gnu: eyeD3: Update to 0.8.8.	2018-12-05 14:08:39 -05:00
mpd.scm	gnu: ncmpc: Update to 0.33.	2018-12-21 16:19:35 -06:00
mpi.scm
mtools.scm	gnu: mtools: Update to 4.0.23.	2018-12-10 10:43:55 +02:00
multiprecision.scm
music.scm	gnu: yoshimi: Update to 1.5.10.	2019-01-03 23:14:38 +01:00
musl.scm
nano.scm
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm	gnu: opendht: Make argon2 a propagated input so that its .pc is found.	2019-01-11 19:48:00 +01:00
nfs.scm
nickle.scm
nim.scm
ninja.scm
node.scm
noweb.scm
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm	gnu: ocaml-graph: Add upstream-name.	2019-01-07 22:05:47 +01:00
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm	gnu: Fix misplaced commas (unquotes).	2018-12-13 00:08:05 -05:00
openldap.scm
openstack.scm
orpheus.scm
ots.scm
package-management.scm	build: Require Guile 2.2.	2019-01-09 14:47:53 +01:00
parallel.scm	gnu: parallel: Update to 20181222.	2018-12-24 13:15:14 +01:00
password-utils.scm	gnu: Add pwsafe	2019-01-10 14:59:22 +01:00
patchutils.scm	gnu: quilt: Use shorter file names for patches.	2018-12-05 00:08:28 +01:00
pciutils.scm
pcre.scm
pdf.scm	gnu: impressive: Update to 0.12.0.	2019-01-12 12:14:31 +01:00
pem.scm
perl-check.scm	gnu: perl-test-mockmodule: Update to 0.170.0.	2019-01-02 22:11:02 +02:00
perl-web.scm
perl.scm	gnu: perl-lingua-translit: Update to 0.28.	2019-01-07 19:42:41 +02:00
phabricator.scm
photo.scm	gnu: darktable: Update to 2.6.0.	2018-12-24 18:01:36 -05:00
php.scm	gnu: php-with-bcmath: Deprecate in favour of 'php'.	2019-01-01 18:57:56 +03:00
pkg-config.scm
plotutils.scm
polkit.scm	gnu: polkit: Fix CVE-2018-19788.	2018-12-09 00:21:09 -05:00
popt.scm
pretty-print.scm
printers.scm
profiling.scm
protobuf.scm
pth.scm
pulseaudio.scm
pumpio.scm
pure.scm
pv.scm
python-crypto.scm	gnu: python-pycryptodome: Update to 3.7.2.	2019-01-06 11:09:56 +02:00
python-web.scm	gnu: python-terminado: Update to 0.8.1.	2019-01-02 16:33:57 +01:00
python.scm	gnu: python-pillow: Update homepage.	2019-01-12 16:39:26 -05:00
qt.scm	gnu: Remove unnecessary build-side module imports.	2019-01-07 14:41:00 +01:00
ragel.scm
rails.scm
ratpoison.scm
rdesktop.scm	gnu: freerdp: Enable tests.	2018-12-30 20:22:58 +02:00
rdf.scm	gnu: python-rdflib: Update to 4.2.2.	2018-12-21 18:07:28 +01:00
re2c.scm
readline.scm
regex.scm	gnu: re2: Update to 2018-12-01.	2018-12-04 21:13:31 +01:00
robotics.scm
rrdtool.scm
rsync.scm
ruby.scm	gnu: ruby: Remove versions 1.8, 2.1 and 2.2.	2019-01-02 15:54:48 +08:00
rush.scm
rust.scm	gnu: rust: Increase build timeouts.	2018-12-12 01:18:09 +01:00
samba.scm	gnu: samba: Update to 4.9.4.	2018-12-27 15:41:34 +01:00
sawfish.scm
scanner.scm
scheme.scm	gnu: chicken: Update to 5.0.0.	2018-12-30 17:05:27 -05:00
screen.scm
scribus.scm
scsi.scm
sdcc.scm
sdl.scm
search.scm
security-token.scm	gnu: Add yubikey-personalization.	2018-12-09 16:40:00 -08:00
selinux.scm
serialization.scm	gnu: r-feather: Move from serialization.scm to cran.scm.	2019-01-07 15:21:09 +01:00
serveez.scm
shells.scm
shellutils.scm
simh.scm
simulation.scm	gnu: Remove unnecessary build-side module imports.	2019-01-07 14:41:00 +01:00
skarnet.scm
skribilo.scm
slang.scm
smalltalk.scm
sml.scm	gnu: polyml: Fetch sources from git.	2018-11-29 22:43:49 +01:00
speech.scm
spice.scm
ssh.scm
sssd.scm
stalonetray.scm
statistics.scm	gnu: r-caret: Update to 6.0-81.	2019-01-12 23:35:13 +01:00
stb.scm
storage.scm	gnu: GCC@7: Update to 7.4.0.	2018-12-08 19:37:47 +01:00
suckless.scm
swig.scm
sync.scm	gnu: qtsyncthingtray: Use 'git-fetch'.	2019-01-02 19:53:06 +02:00
syncthing.scm	gnu: Syncthing: Update to 1.0.0.	2019-01-01 15:18:33 -05:00
syndication.scm
synergy.scm
task-management.scm
tbb.scm
tcl.scm
telephony.scm
terminals.scm	gnu: Remove unnecessary build-side module imports.	2019-01-07 14:41:00 +01:00
terraform.scm
tex.scm	gnu: Update texlive packages.	2019-01-10 22:43:09 +01:00
texinfo.scm
text-editors.scm
textutils.scm	gnu: opencc: Unbundle rapidjson.	2018-12-23 19:48:24 +02:00
time.scm	gnu: python-isodate: Update to 0.6.0.	2019-01-04 16:17:18 +02:00
tls.scm	gnu: OpenSSL 1.1: Update to 1.1.1a [fixes CVE-2018-{0734,0735}].	2018-12-30 13:09:59 -05:00
tmux.scm
tor.scm	gnu: tor: Update to 0.3.4.10.	2019-01-08 04:21:53 +01:00
toys.scm
tryton.scm
tv.scm
uml.scm
unrtf.scm	gnu: unrtf: Update to 0.21.10.	2019-01-06 15:42:05 +02:00
upnp.scm	gnu: libupnp: Update to 1.6.25.	2019-01-11 19:48:00 +01:00
uucp.scm
valgrind.scm
version-control.scm	gnu: libgit2: Update to 0.27.7.	2019-01-09 18:47:57 +01:00
video.scm	gnu: Add missing copyright line.	2019-01-10 08:59:44 +01:00
vim.scm	gnu: vim: Update to 8.1.0644.	2018-12-29 20:26:45 +02:00
virtualization.scm	gnu: Add Bochs.	2019-01-11 17:09:20 -05:00
vpn.scm	gnu: Add badvpn.	2018-12-26 18:40:49 +01:00
vulkan.scm
w3m.scm
wdiff.scm
web-browsers.scm	gnu: sbcl-next: Update inputs for 1.2.0.	2018-12-23 12:05:12 +01:00
web.scm	gnu: Remove reference to (gnu packages statistics).	2019-01-07 15:55:06 +01:00
webkit.scm	gnu: WebKitGTK+ 2.22: Update to 2.22.5 [fixes CVE-2018-4437].	2018-12-17 18:21:43 -05:00
wget.scm	gnu: wget: Enable previously failing test.	2018-12-28 09:58:56 +02:00
wicd.scm
wine.scm	gnu: wine-staging: Hard-code vulkan loader.	2019-01-11 11:15:13 +01:00
wm.scm	gnu: Add polybar.	2018-12-25 17:14:49 +01:00
wordnet.scm
wv.scm
wxwidgets.scm	gnu: Remove unnecessary build-side module imports.	2019-01-07 14:41:00 +01:00
xdisorg.scm	gnu: sct: Correct license.	2019-01-10 14:59:23 +01:00
xfce.scm
xfig.scm
xiph.scm
xml.scm	gnu: Add python-xmltodict.	2018-12-05 03:22:55 +03:00
xnee.scm
xorg.scm
zile.scm