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gnu: r-seurat: Update to 4.0.1.

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* gnu/packages/cran.scm (r-seurat): Update to 4.0.1.
[arguments]: Remove.
[propagated-inputs]: Replace r-spatstat with r-spatstat-core and
r-spatstat-geom.
This commit is contained in:
Ricardo Wurmus 2021-04-07 21:25:06 +02:00
parent 2ffd92abf2
commit 3118fde135
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GPG key ID: 197A5888235FACAC
1 changed files with 4 additions and 15 deletions
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19
gnu/packages/cran.scm
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@ -26484,27 +26484,15 @@ (define-public r-seuratobject
(define-public r-seurat
(package
(name "r-seurat")
(version "4.0.0")
(version "4.0.1")
(source (origin
(method url-fetch)
(uri (cran-uri "Seurat" version))
(sha256
(base32
"1mp3py00bmzj4541d8ry5sfzkpfzvnl9dpa8n4qhakd13dl30xdn"))))
"17cmp9mimvykb8ny796dn1zwmvg0pwwjw1zcixyamc5q1lwnxi3p"))))
(properties `((upstream-name . "Seurat")))
(build-system r-build-system)
;; This is needed because r-spatstat has been split up and there has
;; been no new release of Seurat since then.
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-spatstat-import
(lambda _
(substitute* "NAMESPACE"
(("importFrom\\(spatstat,markvario\\)")
"importFrom(spatstat.core,markvario)")
(("importFrom\\(spatstat,ppp\\)")
"importFrom(spatstat.geom,ppp)")))))))
(propagated-inputs
`(("r-cluster" ,r-cluster)
("r-cowplot" ,r-cowplot)
@ -26545,7 +26533,8 @@ (define-public r-seurat
("r-sctransform" ,r-sctransform)
("r-seuratobject" ,r-seuratobject)
("r-shiny" ,r-shiny)
("r-spatstat" ,r-spatstat)
("r-spatstat-core" ,r-spatstat-core)
("r-spatstat-geom" ,r-spatstat-geom)
("r-tibble" ,r-tibble)
("r-uwot" ,r-uwot)))
(home-page "http://www.satijalab.org/seurat")