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gnu: r-phangorn: Move to (gnu packages cran).

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* gnu/packages/bioinformatics.scm (r-phangorn): Move from here...
* gnu/packages/cran.scm (r-phangorn): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
This commit is contained in:
zimoun 2020-09-11 20:08:49 +02:00 committed by Ricardo Wurmus
parent f9c0b2e05a
commit 415aa8a583
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GPG key ID: 197A5888235FACAC
2 changed files with 28 additions and 28 deletions
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28
gnu/packages/bioinformatics.scm
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@ -10936,34 +10936,6 @@ (define-public r-delayedmatrixstats
memory usage and processing time is minimized.")
(license license:expat)))
(define-public r-phangorn
(package
(name "r-phangorn")
(version "2.5.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "phangorn" version))
(sha256
(base32
"0ihkaykqjmf80d8wrk3saphxvnv58zma6pd13633bd3cwanc33f5"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ape" ,r-ape)
("r-fastmatch" ,r-fastmatch)
("r-igraph" ,r-igraph)
("r-magrittr" ,r-magrittr)
("r-matrix" ,r-matrix)
("r-quadprog" ,r-quadprog)
("r-rcpp" ,r-rcpp)))
(home-page "https://github.com/KlausVigo/phangorn")
(synopsis "Phylogenetic analysis in R")
(description
"Phangorn is a package for phylogenetic analysis in R. It supports
estimation of phylogenetic trees and networks using Maximum Likelihood,
Maximum Parsimony, distance methods and Hadamard conjugation.")
(license license:gpl2+)))
(define-public r-dropbead
(let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247")
(revision "2"))

28
gnu/packages/cran.scm
View file

@ -24496,3 +24496,31 @@ (define-public r-seurat
algorithms; density clustering, hierarchical clustering, k-means, and the
discovery of differentially expressed genes and markers.")
(license license:gpl3)))
(define-public r-phangorn
(package
(name "r-phangorn")
(version "2.5.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "phangorn" version))
(sha256
(base32
"0ihkaykqjmf80d8wrk3saphxvnv58zma6pd13633bd3cwanc33f5"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ape" ,r-ape)
("r-fastmatch" ,r-fastmatch)
("r-igraph" ,r-igraph)
("r-magrittr" ,r-magrittr)
("r-matrix" ,r-matrix)
("r-quadprog" ,r-quadprog)
("r-rcpp" ,r-rcpp)))
(home-page "https://github.com/KlausVigo/phangorn")
(synopsis "Phylogenetic analysis in R")
(description
"Phangorn is a package for phylogenetic analysis in R. It supports
estimation of phylogenetic trees and networks using Maximum Likelihood,
Maximum Parsimony, distance methods and Hadamard conjugation.")
(license license:gpl2+)))