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gnu: Add r-raggedexperiment.
* gnu/packages/bioconductor.scm (r-raggedexperiment): New variable.
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@ -7363,6 +7363,39 @@ (define-public r-hpar
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the Human Protein Atlas project.")
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the Human Protein Atlas project.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-raggedexperiment
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(package
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(name "r-raggedexperiment")
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(version "1.24.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "RaggedExperiment" version))
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(sha256
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(base32
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"1xs7dz5mkh9zs078g2a0izij8vxrwhzh7gyjglp057gicsca0hal"))))
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(properties `((upstream-name . "RaggedExperiment")))
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(build-system r-build-system)
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(propagated-inputs (list r-biocgenerics
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r-genomeinfodb
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r-genomicranges
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r-iranges
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r-matrix
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r-matrixgenerics
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r-s4vectors
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r-summarizedexperiment))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/RaggedExperiment")
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(synopsis "Representation of sparse experiments and assays across samples")
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(description
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"This package provides a flexible representation of copy number,
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mutation, and other data that fit into the ragged array schema for genomic
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location data. The basic representation of such data provides a rectangular
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flat table interface to the user with range information in the rows and
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samples/specimen in the columns. The @code{RaggedExperiment} class derives
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from a @code{GRangesList} representation and provides a semblance of a
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rectangular dataset.")
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(license license:artistic2.0)))
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(define-public r-rhtslib
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(define-public r-rhtslib
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(package
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(package
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(name "r-rhtslib")
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(name "r-rhtslib")
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