ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2025-01-27 04:59:27 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions

gnu: mafft: Add bash-minimal to inputs.

Browse source 
* gnu/packages/bioinformatics.scm (mafft): Delete trailing #t.
[inputs]: Add bash-minimal.

Change-Id: Id30d22dc37ee57591f17dc116de81500b09adf3c
This commit is contained in:
Maxim Cournoyer 2023-10-20 01:05:23 -04:00 committed by Ludovic Courtès
parent bff03561c4
commit 6bcc2f6571
No known key found for this signature in database
GPG key ID: 090B11993D9AEBB5
1 changed files with 3 additions and 5 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

8
gnu/packages/bioinformatics.scm
View file

@ -8810,8 +8810,7 @@ (define-public mafft
(("^rm -f mafft-distance mafft-distance.exe") ")#")
;; do not install MAN pages in libexec folder
(("^\t\\$\\(INSTALL\\) -m 644 \\$\\(MANPAGES\\) \
\\$\\(DESTDIR\\)\\$\\(LIBDIR\\)") "#"))
#t))
\\$\\(DESTDIR\\)\\$\\(LIBDIR\\)") "#"))))
(add-after 'enter-dir 'patch-paths
(lambda* (#:key inputs #:allow-other-keys)
(substitute* '("pairash.c"
@ -8819,8 +8818,7 @@ (define-public mafft
(("perl") (which "perl"))
(("([\"`| ])awk" _ prefix)
(string-append prefix (which "awk")))
(("grep") (which "grep")))
#t))
(("grep") (which "grep")))))
(delete 'configure)
(add-after 'install 'wrap-programs
(lambda* (#:key inputs outputs #:allow-other-keys)
@ -8833,7 +8831,7 @@ (define-public mafft
`("PATH" ":" prefix (,path))))
(find-files bin))))))))
(inputs
(list perl ruby gawk grep coreutils))
(list bash-minimal perl ruby gawk grep coreutils))
(home-page "https://mafft.cbrc.jp/alignment/software/")
(synopsis "Multiple sequence alignment program")
(description