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gnu: Add r-leidenbase.

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* gnu/packages/bioconductor.scm (r-leidenbase): New variable.
This commit is contained in:
Ricardo Wurmus 2021-06-21 17:52:00 +02:00
parent a41bddd29d
commit 7209beb694
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1 changed files with 34 additions and 0 deletions
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34
gnu/packages/bioconductor.scm
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@ -6371,6 +6371,40 @@ (define-public r-monocle
qPCR data, but could be used with other types as well.")
(license license:artistic2.0)))
(define-public r-leidenbase
(let ((commit "430f22af6982cc7d2e6e77f6b0df47bc970dcbce")
(revision "1"))
(package
(name "r-leidenbase")
(version (git-version "0.1.3" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/cole-trapnell-lab/leidenbase")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0ylqsmdpv4xq6f6ldxvwkhk33a9i1jcgk60zvksk3iplykfzd6c0"))))
(properties `((upstream-name . "leidenbase")))
(build-system r-build-system)
(inputs
`(("zlib" ,zlib)))
(native-inputs
`(("gfortran" ,gfortran)))
(propagated-inputs
`(("r-igraph" ,r-igraph)))
(home-page "https://github.com/cole-trapnell-lab/leidenbase")
(synopsis "R and C wrappers to run the Leiden find_partition function")
(description
"This package provides an R to C interface that runs the Leiden
community detection algorithm to find a basic partition. It runs the
equivalent of the @code{find_partition} function. This package includes the
required source code files from the official Leidenalg distribution and
several functions from the R igraph package.")
(license license:gpl3+))))
(define-public r-monocle3
(package
(name "r-monocle3")