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gnu: Add r-adamgui.
* gnu/packages/bioconductor.scm (r-adamgui): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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@ -1616,6 +1616,54 @@ (define-public r-adam
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functionally associated genes} (GFAG).")
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(license license:gpl2+)))
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(define-public r-adamgui
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(package
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(name "r-adamgui")
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(version "1.10.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "ADAMgui" version))
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(sha256
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(base32
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"0n06bb9djigha0249lxx84pn9q0xiryxbv25qsc3p2h46iaxi3wq"))))
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(properties `((upstream-name . "ADAMgui")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-adam
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r-colorramps
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r-data-table
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r-dplyr
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r-dt
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r-ggplot2
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r-ggpubr
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r-ggrepel
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r-ggsignif
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r-go-db
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r-gridextra
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r-knitr
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r-rcolorbrewer
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r-reshape2
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r-shiny
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r-shinyjs
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r-stringi
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r-stringr
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r-testthat
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r-varhandle))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/ADAMgui/")
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(synopsis "GUI for gene activity and diversity analysis")
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(description
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"This package @code{ADAMgui} is a @dfn{graphical user interface} (GUI)
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for the @code{ADAM} package. The @code{ADAMgui} package provides two
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shiny-based applications that allows the user to study the output of the
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@code{ADAM} package files through different plots. It's possible, for
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example, to choose a specific @dfn{group of functionally associated
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genes} (GFAG) and observe the gene expression behavior with the plots created
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with the @code{GFAGtargetUi} function. Features such as differential
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expression and fold change can be easily seen with aid of the plots made with
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the @code{GFAGpathUi} function.")
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(license license:gpl2+)))
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(define-public r-aneufinder
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(package
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(name "r-aneufinder")
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