mirror of
https://git.in.rschanz.org/ryan77627/guix.git
synced 2024-11-15 19:35:25 -05:00
gnu: Add r-adamgui.
* gnu/packages/bioconductor.scm (r-adamgui): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
This commit is contained in:
parent
1c3c00a8a1
commit
936f23a654
1 changed files with 48 additions and 0 deletions
|
@ -1616,6 +1616,54 @@ (define-public r-adam
|
||||||
functionally associated genes} (GFAG).")
|
functionally associated genes} (GFAG).")
|
||||||
(license license:gpl2+)))
|
(license license:gpl2+)))
|
||||||
|
|
||||||
|
(define-public r-adamgui
|
||||||
|
(package
|
||||||
|
(name "r-adamgui")
|
||||||
|
(version "1.10.0")
|
||||||
|
(source (origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (bioconductor-uri "ADAMgui" version))
|
||||||
|
(sha256
|
||||||
|
(base32
|
||||||
|
"0n06bb9djigha0249lxx84pn9q0xiryxbv25qsc3p2h46iaxi3wq"))))
|
||||||
|
(properties `((upstream-name . "ADAMgui")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs
|
||||||
|
(list r-adam
|
||||||
|
r-colorramps
|
||||||
|
r-data-table
|
||||||
|
r-dplyr
|
||||||
|
r-dt
|
||||||
|
r-ggplot2
|
||||||
|
r-ggpubr
|
||||||
|
r-ggrepel
|
||||||
|
r-ggsignif
|
||||||
|
r-go-db
|
||||||
|
r-gridextra
|
||||||
|
r-knitr
|
||||||
|
r-rcolorbrewer
|
||||||
|
r-reshape2
|
||||||
|
r-shiny
|
||||||
|
r-shinyjs
|
||||||
|
r-stringi
|
||||||
|
r-stringr
|
||||||
|
r-testthat
|
||||||
|
r-varhandle))
|
||||||
|
(native-inputs (list r-knitr))
|
||||||
|
(home-page "https://bioconductor.org/packages/ADAMgui/")
|
||||||
|
(synopsis "GUI for gene activity and diversity analysis")
|
||||||
|
(description
|
||||||
|
"This package @code{ADAMgui} is a @dfn{graphical user interface} (GUI)
|
||||||
|
for the @code{ADAM} package. The @code{ADAMgui} package provides two
|
||||||
|
shiny-based applications that allows the user to study the output of the
|
||||||
|
@code{ADAM} package files through different plots. It's possible, for
|
||||||
|
example, to choose a specific @dfn{group of functionally associated
|
||||||
|
genes} (GFAG) and observe the gene expression behavior with the plots created
|
||||||
|
with the @code{GFAGtargetUi} function. Features such as differential
|
||||||
|
expression and fold change can be easily seen with aid of the plots made with
|
||||||
|
the @code{GFAGpathUi} function.")
|
||||||
|
(license license:gpl2+)))
|
||||||
|
|
||||||
(define-public r-aneufinder
|
(define-public r-aneufinder
|
||||||
(package
|
(package
|
||||||
(name "r-aneufinder")
|
(name "r-aneufinder")
|
||||||
|
|
Loading…
Reference in a new issue