mirror of
https://git.in.rschanz.org/ryan77627/guix.git
synced 2025-01-26 12:39:36 -05:00
gnu: Add r-ucell.
* gnu/packages/bioconductor.scm (r-ucell): New variable.
This commit is contained in:
parent
91b1367e90
commit
9cf4d48850
1 changed files with 31 additions and 0 deletions
|
@ -17291,6 +17291,37 @@ (define-public r-htqpcr
|
|||
features (e.g. genes, microRNAs).")
|
||||
(license license:artistic2.0)))
|
||||
|
||||
(define-public r-ucell
|
||||
(package
|
||||
(name "r-ucell")
|
||||
(version "2.4.0")
|
||||
(source (origin
|
||||
(method url-fetch)
|
||||
(uri (bioconductor-uri "UCell" version))
|
||||
(sha256
|
||||
(base32
|
||||
"01qcwmiqri4xvwr3j4k1g062rfj6bbc0bvh0ifq1jq2xrm1azw9y"))))
|
||||
(properties `((upstream-name . "UCell")))
|
||||
(build-system r-build-system)
|
||||
(propagated-inputs (list r-biocneighbors
|
||||
r-biocparallel
|
||||
r-data-table
|
||||
r-matrix
|
||||
r-singlecellexperiment
|
||||
r-summarizedexperiment))
|
||||
(native-inputs (list r-knitr))
|
||||
(home-page "https://github.com/carmonalab/UCell")
|
||||
(synopsis "Rank-based signature enrichment analysis for single-cell data")
|
||||
(description
|
||||
"UCell is a package for evaluating gene signatures in single-cell datasets.
|
||||
UCell signature scores, based on the Mann-Whitney U statistic, are robust to
|
||||
dataset size and heterogeneity, and their calculation demands less computing
|
||||
time and memory than other available methods, enabling the processing of large
|
||||
datasets in a few minutes even on machines with limited computing power.
|
||||
UCell can be applied to any single-cell data matrix, and includes functions to
|
||||
directly interact with SingleCellExperiment and Seurat objects.")
|
||||
(license license:gpl3)))
|
||||
|
||||
(define-public r-unifiedwmwqpcr
|
||||
(package
|
||||
(name "r-unifiedwmwqpcr")
|
||||
|
|
Loading…
Reference in a new issue