gnu: Add r-ucell.

* gnu/packages/bioconductor.scm (r-ucell): New variable.
This commit is contained in:
Ricardo Wurmus 2023-07-19 15:16:04 +02:00
parent 91b1367e90
commit 9cf4d48850
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@ -17291,6 +17291,37 @@ (define-public r-htqpcr
features (e.g. genes, microRNAs).")
(license license:artistic2.0)))
(define-public r-ucell
(package
(name "r-ucell")
(version "2.4.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "UCell" version))
(sha256
(base32
"01qcwmiqri4xvwr3j4k1g062rfj6bbc0bvh0ifq1jq2xrm1azw9y"))))
(properties `((upstream-name . "UCell")))
(build-system r-build-system)
(propagated-inputs (list r-biocneighbors
r-biocparallel
r-data-table
r-matrix
r-singlecellexperiment
r-summarizedexperiment))
(native-inputs (list r-knitr))
(home-page "https://github.com/carmonalab/UCell")
(synopsis "Rank-based signature enrichment analysis for single-cell data")
(description
"UCell is a package for evaluating gene signatures in single-cell datasets.
UCell signature scores, based on the Mann-Whitney U statistic, are robust to
dataset size and heterogeneity, and their calculation demands less computing
time and memory than other available methods, enabling the processing of large
datasets in a few minutes even on machines with limited computing power.
UCell can be applied to any single-cell data matrix, and includes functions to
directly interact with SingleCellExperiment and Seurat objects.")
(license license:gpl3)))
(define-public r-unifiedwmwqpcr
(package
(name "r-unifiedwmwqpcr")