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gnu: Add r-roar.

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* gnu/packages/bioconductor.scm (r-roar): New variable.
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Ricardo Wurmus 2019-03-29 22:41:58 +01:00
parent 98a2af31a8
commit a6e1eb1a96
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gnu/packages/bioconductor.scm
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@ -3914,3 +3914,32 @@ (define-public r-yarn
techniques to account for the large heterogeneity and sparsity found in very
large RNA-seq experiments.")
(license license:artistic2.0)))
(define-public r-roar
(package
(name "r-roar")
(version "1.18.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "roar" version))
(sha256
(base32
"15650s9vs7dvmqpvrs4xwn6j4kh14yqsx4daqyhhxxr68kn8mklw"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-summarizedexperiment" ,r-summarizedexperiment)))
(home-page "https://github.com/vodkatad/roar/")
(synopsis "Identify differential APA usage from RNA-seq alignments")
(description
"This package provides tools for identifying preferential usage of APA
sites, comparing two biological conditions, starting from known alternative
sites and alignments obtained from standard RNA-seq experiments.")
(license license:gpl3)))