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gnu: r-go-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-go-db): Move from here... * gnu/packages/bioconductor.scm (r-go-db): ...to here. [source]: Replace 'string-append' by 'bioconductor-uri' with 'annotation.
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2 changed files with 22 additions and 24 deletions
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@ -436,6 +436,28 @@ (define-public r-genomeinfodbdata
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ID and species. It is used by functions in the GenomeInfoDb package.")
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(license license:artistic2.0)))
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(define-public r-go-db
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(package
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(name "r-go-db")
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(version "3.7.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "GO.db" version 'annotation))
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(sha256
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(base32
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"0i3wcf5h3n0dawzc1hy0kv74f06j80c47n4p3g3fmrcxlhi3jpa5"))))
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(properties
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`((upstream-name . "GO.db")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)))
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(home-page "https://bioconductor.org/packages/GO.db")
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(synopsis "Annotation maps describing the entire Gene Ontology")
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(description
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"The purpose of this GO.db annotation package is to provide detailed
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information about the latest version of the Gene Ontologies.")
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(license license:artistic2.0)))
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(define-public r-homo-sapiens
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(package
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(name "r-homo-sapiens")
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@ -7952,30 +7952,6 @@ (define-public bio-vcf
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(home-page "https://github.com/vcflib/bio-vcf")
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(license license:expat)))
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(define-public r-go-db
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(package
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(name "r-go-db")
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(version "3.7.0")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://www.bioconductor.org/packages/"
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"release/data/annotation/src/contrib/GO.db_"
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version ".tar.gz"))
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(sha256
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(base32
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"0i3wcf5h3n0dawzc1hy0kv74f06j80c47n4p3g3fmrcxlhi3jpa5"))))
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(properties
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`((upstream-name . "GO.db")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)))
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(home-page "https://bioconductor.org/packages/GO.db")
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(synopsis "Annotation maps describing the entire Gene Ontology")
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(description
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"The purpose of this GO.db annotation package is to provide detailed
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information about the latest version of the Gene Ontologies.")
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(license license:artistic2.0)))
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(define-public r-spp
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(package
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(name "r-spp")
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