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gnu: r-annotationforge: Move to (gnu packages bioconductor).

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* gnu/packages/bioinformatics.scm (r-annotationforge): Move from here...
* gnu/packages/bioconductor.scm (r-annotationforge): ...to here.
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zimoun 2021-03-08 18:57:57 +01:00 committed by Ricardo Wurmus
parent d769b10714
commit ff92c2873c
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2 changed files with 32 additions and 32 deletions
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32
gnu/packages/bioconductor.scm
View file

@ -1487,6 +1487,38 @@ (define-public r-annotate
microarrays.")
(license license:artistic2.0)))
(define-public r-annotationforge
(package
(name "r-annotationforge")
(version "1.32.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "AnnotationForge" version))
(sha256
(base32
"0y3820dkvwz09wlmz9drx6gqpsr9cwppaiz40zafwfxbz65y8px7"))))
(properties
`((upstream-name . "AnnotationForge")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-dbi" ,r-dbi)
("r-rcurl" ,r-rcurl)
("r-rsqlite" ,r-rsqlite)
("r-s4vectors" ,r-s4vectors)
("r-xml" ,r-xml)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/AnnotationForge")
(synopsis "Code for building annotation database packages")
(description
"This package provides code for generating Annotation packages and their
databases. Packages produced are intended to be used with AnnotationDbi.")
(license license:artistic2.0)))
(define-public r-deseq2
(package
(name "r-deseq2")

32
gnu/packages/bioinformatics.scm
View file

@ -7387,38 +7387,6 @@ (define-public r-demultiplex
")
(license license:cc0))))
(define-public r-annotationforge
(package
(name "r-annotationforge")
(version "1.32.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "AnnotationForge" version))
(sha256
(base32
"0y3820dkvwz09wlmz9drx6gqpsr9cwppaiz40zafwfxbz65y8px7"))))
(properties
`((upstream-name . "AnnotationForge")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-dbi" ,r-dbi)
("r-rcurl" ,r-rcurl)
("r-rsqlite" ,r-rsqlite)
("r-s4vectors" ,r-s4vectors)
("r-xml" ,r-xml)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/AnnotationForge")
(synopsis "Code for building annotation database packages")
(description
"This package provides code for generating Annotation packages and their
databases. Packages produced are intended to be used with AnnotationDbi.")
(license license:artistic2.0)))
(define-public r-rbgl
(package
(name "r-rbgl")