Commit graph

130316 commits

Author SHA1 Message Date
Denis 'GNUtoo' Carikli
06221e910a
gnu: Add aflplusplus.
* gnu/packages/debug.scm (aflplusplus): New variable.

Change-Id: Ibda36187e839d5f533d461444db25a7ba5567f0f
Modified-by: Hilton Chain <hako@ultrarare.space>
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-01-25 23:48:49 +08:00
Ricardo Wurmus
250477d896
gnu: Add python-gh-md-to-html.
* gnu/packages/python-xyz.scm (python-gh-md-to-html): New variable.

Change-Id: I8a7f62000eec0636d2c1114c53c852fa136576b1
2024-01-25 15:13:52 +01:00
Ricardo Wurmus
72a758bcd3
gnu: python-pyro-ppl: Skip one more test.
* gnu/packages/machine-learning.scm (python-pyro-ppl)[build-system]: Use
pyproject-build-system.
[arguments]: Remove custom 'check phase and replace with #:test-flags; disable
test_sample tests.

Change-Id: I058892451b9e5c96b077fae426a6649ce16f54c5
2024-01-25 15:13:51 +01:00
Ricardo Wurmus
6623a8151a
gnu: Add music.
* gnu/packages/bioinformatics.scm (music): New variable.

Change-Id: Iba5c986a0d3143118d4640d3ee9d4dae8119163f
2024-01-25 15:13:51 +01:00
Andreas Enge
5111915e6a
gnu: s7: Update to 24.1-0.23a64fa.
* gnu/packages/lisp.scm (s7-bootstrap): Update to 24.1-0.23a64fa.

Change-Id: I5853c2f4bb7f2f8c9c34fd8f3d358d94d287d14b
2024-01-25 12:01:58 +01:00
Efraim Flashner
eb3d1d65eb
gnu: qtwebengine: Build with clang-15.
* gnu/packages/qt.scm (qtwebengine)[native-inputs]: Replace clang-14
with clang-15, lld-as-ld-wrapper with lld-as-ld-wrapper-15.

Change-Id: Iefecc519d5bf1edc968225454339656af4592170
2024-01-25 12:18:26 +02:00
Efraim Flashner
f396873dde
gnu: ldc: Build with llvm-15.
* gnu/packages/dlang.scm (ldc-bootstrap)[native-inputs]: Replace llvm-14
with llvm-15, lld-wrapper-14 with lld-wrapper-15.
(ldc)[native-inputs]: Replace clang-14 with clang-15.

Change-Id: Iaa2023c7fb8a515c50a141d0157d9023cfb5c623
2024-01-25 12:18:26 +02:00
Ricardo Wurmus
891f97d260
gnu: r-bayesfactor: Update to 0.9.12-4.7.
* gnu/packages/statistics.scm (r-bayesfactor): Update to 0.9.12-4.7.

Change-Id: I946e370397d5ca7d58f9b61fd2aaebe988ece43c
2024-01-25 09:43:05 +01:00
Ricardo Wurmus
ed64ab4c9a
gnu: r-cowplot: Update to 1.1.3.
* gnu/packages/statistics.scm (r-cowplot): Update to 1.1.3.

Change-Id: I06bc9f67a9911ef927d31f7d33b4e59c2f25e02b
2024-01-25 09:43:04 +01:00
Ricardo Wurmus
d63c2ee69e
gnu: r-r-oo: Update to 1.26.0.
* gnu/packages/statistics.scm (r-r-oo): Update to 1.26.0.

Change-Id: Ic85ada2a8f72202641cfc75f73344c23bc7d152a
2024-01-25 09:43:04 +01:00
Ricardo Wurmus
a73bf3375b
gnu: r-segmented: Update to 2.0-2.
* gnu/packages/statistics.scm (r-segmented): Update to 2.0-2.

Change-Id: I4753d69bf5c38fec7d37acb3b214652de4be3d0c
2024-01-25 09:43:04 +01:00
Ricardo Wurmus
b029555e56
gnu: r-ggh4x: Update to 0.2.8.
* gnu/packages/cran.scm (r-ggh4x): Update to 0.2.8.

Change-Id: I9757f1168761b5f9d820ba43bfffcea7d4979e66
2024-01-25 09:43:04 +01:00
Ricardo Wurmus
44d50d1b08
gnu: r-consrank: Update to 2.1.4.
* gnu/packages/cran.scm (r-consrank): Update to 2.1.4.

Change-Id: Icf447178150fe8bd2d8c9cce344ef7cebc080c14
2024-01-25 09:43:04 +01:00
Ricardo Wurmus
cd635c19a7
gnu: r-directlabels: Update to 2024.1.21.
* gnu/packages/cran.scm (r-directlabels): Update to 2024.1.21.

Change-Id: I4efad0c947bf02083459653e800b68e8a26acbbf
2024-01-25 09:43:04 +01:00
Ricardo Wurmus
85ac63bd71
gnu: r-rainbow: Update to 3.8.
* gnu/packages/cran.scm (r-rainbow): Update to 3.8.

Change-Id: Ice3e294dd35979a1e7b0bb0cdfbd116d6023f0e2
2024-01-25 09:43:03 +01:00
Ricardo Wurmus
cf3a5f51bd
gnu: r-r-filesets: Update to 2.15.1.
* gnu/packages/cran.scm (r-r-filesets): Update to 2.15.1.

Change-Id: I65b0ead73e5c0b48eb4717d7a35796a5f6ca0c5f
2024-01-25 09:43:03 +01:00
Ricardo Wurmus
353de1f8de
gnu: r-r-huge: Update to 0.10.1.
* gnu/packages/cran.scm (r-r-huge): Update to 0.10.1.

Change-Id: Ia7a7cceefd816a36fd8c33866e379c5780088c42
2024-01-25 09:43:03 +01:00
Ricardo Wurmus
bd65f7b6af
gnu: r-kableextra: Update to 1.4.0.
* gnu/packages/cran.scm (r-kableextra): Update to 1.4.0.
[propagated-inputs]: Remove r-glue, r-rvest, and r-webshot.

Change-Id: I54ae752da0b802b0f322c8762d73c3d1519103ee
2024-01-25 09:43:03 +01:00
Ricardo Wurmus
aea3c44027
gnu: r-rcppannoy: Update to 0.0.22.
* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.22.

Change-Id: I87fde0568881276bec612ae99e95ea5c9c70a3f0
2024-01-25 09:43:03 +01:00
Ricardo Wurmus
b634edeaab
gnu: r-emmeans: Update to 1.10.0.
* gnu/packages/cran.scm (r-emmeans): Update to 1.10.0.

Change-Id: I32a041b81e528b8b07068f748a7b9f8186a34a89
2024-01-25 09:43:03 +01:00
Ricardo Wurmus
c12bc9a581
gnu: r-ggridges: Update to 0.5.6.
* gnu/packages/cran.scm (r-ggridges): Update to 0.5.6.

Change-Id: Ic0c746f31294f8a4e9668eff6ae7d02c27f64f1c
2024-01-25 09:43:02 +01:00
Ricardo Wurmus
6064758fdf
gnu: r-conos: Update to 1.5.1.
* gnu/packages/bioconductor.scm (r-conos): Update to 1.5.1.

Change-Id: If05dea04f6abb3c78504ab46aa052aeb288a7c8c
2024-01-25 09:43:02 +01:00
Ricardo Wurmus
ee805f86fe
gnu: r-tidyr: Update to 1.3.1.
* gnu/packages/statistics.scm (r-tidyr): Update to 1.3.1.

Change-Id: I4b97cbcaad562070440d692a1a5652eb15123516
2024-01-25 09:43:02 +01:00
Vinicius Monego
ffa73f8ef2
gnu: python-opentsne: Update to 1.0.1.
* gnu/packages/machine-learning.scm (python-opentsne): Update to 1.0.1.

Change-Id: Ic71c3622e9408a21c5bade00228a9af5320c6dce
2024-01-24 20:02:55 -03:00
Vinicius Monego
b6e3527aae
gnu: python-pymc: Update to 5.10.3.
* gnu/packages/statistics.scm (python-pymc): Update to 5.10.3.

Change-Id: I7c30e5a487f97415ef3bf7f9c514a5de54dcd611
2024-01-24 20:02:51 -03:00
Vinicius Monego
90b80796bf
gnu: python-arviz: Update to 0.17.0.
* gnu/packages/statistics.scm (python-arviz): Update to 0.17.0.

Change-Id: I93112c570010165c888b5e303a3c82d80cda3016
2024-01-24 20:02:51 -03:00
Vinicius Monego
a4c9766108
gnu: python-xarray-einstats: Update to 0.7.0.
* gnu/packages/python-science.scm (python-xarray-einstats): Update to 0.7.0.

Change-Id: Iddd1fca8c37f05a928d20b90f9f95814f31435b2
2024-01-24 20:02:51 -03:00
Vinicius Monego
2836325c2b
gnu: python-scikit-rf: Update to 0.31.0.
* gnu/packages/engineering.scm (python-scikit-rf): Update to 0.31.0.

Change-Id: I5dc8891530d7a7e55a899cfde4f72aecc83ec044
2024-01-24 20:02:47 -03:00
Roman Scherer
8bee6bb9aa
gnu: guile-fibers: Disable failing tests on aarch64.
* gnu/packages/guile-xyz.scm (guile-fibers)[arguments]: In
‘disable-some-tests’ phase, disable failing tests on aarch64.

Change-Id: Id05b516a659f641cc7ef01efdaf6cd1f2c735800
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2024-01-24 23:28:38 +01:00
Sergey Trofimov
f8e0e5274f
scripts: describe: Support 'channels-sans-intro' format for local checkouts.
* guix/scripts/describe.scm (%display-checkout-info):
Support 'channels-sans-intro' format.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-01-24 23:28:38 +01:00
Ludovic Courtès
6cca8f0694
weather: Add ‘-e’.
* guix/scripts/weather.scm (show-help, %options): Add ‘-e’.
(guix-weather): Handle it.
* doc/guix.texi (Invoking guix weather): Document it.

Change-Id: I6dc97ec2b8226b57be33247b05a34c23b573a64f
2024-01-24 23:28:38 +01:00
Ludovic Courtès
96c2186a08
services: cuirass: Depend on ‘user-processes’.
* gnu/services/cuirass.scm (cuirass-shepherd-service)
(cuirass-remote-worker-shepherd-service): Add ‘user-processes’ to the
‘requirement’ field.

Change-Id: Iba087bfd8aaa9b1ef54bcc77d855adc136e18644
2024-01-24 23:28:38 +01:00
Ludovic Courtès
94abfccde9
services: cuirass: Add ‘configuration’ action.
* gnu/services/cuirass.scm (cuirass-shepherd-service): Add ‘actions’
field to ‘cuirass’ Shepherd service.

Change-Id: I7feaeebcb89fcd9a1fdbc63f0337e0d63b697793
2024-01-24 23:28:37 +01:00
Sharlatan Hellseher
8f86cbd5e9
gnu: libnova: Use G-Expressions.
* gnu/packages/astronomy.scm (libnova): Adjust package style by applying
G-Expressions and fix indention.
[arguments]<#:phases>: Remove trailing #f from lambda.

Change-Id: I63d239464fd3cb166449ef8904b5fd72326cb853
2024-01-24 22:24:38 +00:00
Sharlatan Hellseher
f74a8e8ac0
gnu: stackistry: Use G-Expressions.
* gnu/packages/astronomy.scm (stackistry): Update package style by using
G-Expressions. Apply indention.
[arguments]<#:tests?>: Use it instead of deleting check phase.
<#:phases>: Remove trailing #f from each lambda.

Change-Id: I30f3906719713f0d47dc2049564bc2691ba3cd5d
2024-01-24 22:24:38 +00:00
Sharlatan Hellseher
6431cf121d
gnu: libpasastro: Use G-Expressions.
* gnu/packages/astronomy.scm (libpasastro):
[supported-systems]: Add it.
[arguments]: Rewrite using G-expressions.
[description]: Remove trailing \n.

Change-Id: Ic0e79394be1110566f5481963fdd167985c1a770
2024-01-24 22:24:38 +00:00
Sharlatan Hellseher
e586c8189b
gnu: python-stsynphot: Fix build.
* gnu/packages/astronomy.scm (python-stsynphot): Fix build.
[native-inputs]: Add python-semantic-version.

Change-Id: I72b086c6a0461293c2191e39e25b3c803279bf60
2024-01-24 22:24:38 +00:00
Sharlatan Hellseher
884bddc26c
gnu: python-skyfield: Update to 1.47.
* gnu/packages/astronomy.scm (python-skyfield): Update to 1.47.
[inputs]: Remove python-certifi, python-jplephem, python-numpy, and python-sgp4.
[propagated-inputs]: Add python-certifi, python-jplephem, python-numpy, and python-sgp4.

Change-Id: If5a9a47077edcebe83449c4c54a49189dea61c5a
2024-01-24 22:24:38 +00:00
Sharlatan Hellseher
324bc1ea8f
gnu: python-tweakwcs: Update to 0.8.6.
* gnu/packages/astronomy.scm (python-tweakwcs): Update to 0.8.6.

Change-Id: Icfbb7680a5e208d68f5b8da3fa3fdd35a358ecf5
2024-01-24 22:24:38 +00:00
Sharlatan Hellseher
a57fa5a8ce
gnu: python-synphot: Enable more options.
* gnu/packages/astronomy.scm (python-synphot) [propagated-inputs]: Add
python-dust-extinction and python-specutils. Sort alphabetically.
[native-inputs]: Add python-semantic-version.

Change-Id: If4dbcf2765508d7c7e2b7580193367ed2d038b6f
2024-01-24 22:24:38 +00:00
Sharlatan Hellseher
fb4293c4ec
gnu: Add python-specutils.
* gnu/packages/astronomy.scm (python-specutils): New variable.

Change-Id: Ic2ee65eb8a6fb7e5fe0d0d086541d47eef8bd1ad
2024-01-24 22:24:38 +00:00
Sharlatan Hellseher
4d00cf5d78
gnu: Add python-dust-extinction.
* gnu/packages/astronomy.scm (python-dust-extinction): New variable.

Change-Id: I6fecfede0c347d032555b8f81bcf4f7072fc1129
2024-01-24 22:24:38 +00:00
Sharlatan Hellseher
a75c4114f8
gnu: Add python-ndcube.
* gnu/packages/astronomy.scm (python-ndcube): New variable.

Change-Id: I94087c7e02ca678531bcbf4eb3d035e2647768fd
2024-01-24 22:24:37 +00:00
Sharlatan Hellseher
5d390495ab
gnu: python-sunpy: Update to 5.1.1.
* gnu/packages/astronomy.scm (python-sunpy): Update to 5.1.1.
[arguments]<#:test-flags>: Ignore test_spice.py as SpicePy is not packed
yet and python-spicepy is optional.
<#:phases>{prepare-test-environment}: Add pytest.ini configuration file
to fix tests.

Change-Id: Icfb05ce29b376a05291e9f7020170e389d0081d2
2024-01-24 22:24:37 +00:00
Sharlatan Hellseher
8084df8b10
gnu: python-stcal: Update to 1.5.2.
* gnu/packages/astronomy.scm (python-stcal): Update to 1.5.2.
[propagated-inputs]: Add python-asdf-3.0 and python-gwcs.
[native-inputs]: Remove python-cython; add python-cython-3 and python-semantic-version.

Change-Id: I8b6a90a3c0b75ee43de4c7069950a4f9578ea825
2024-01-24 22:24:37 +00:00
Sharlatan Hellseher
4a68e6aabf
gnu: python-pyvo: Update to 1.5.
* gnu/packages/astronomy.scm (python-pyvo): Update to 1.5.
[propagated-inputs]: Remove python-mimeparse.

Change-Id: I4d3e19b95c034cf3c82cec55a198d9a927934971
2024-01-24 22:24:37 +00:00
Sharlatan Hellseher
01b0ed5a6d
gnu: python-drms: Update to 0.7.1.
* gnu/packages/astronomy.scm (python-drms): Update to 0.7.1.

Change-Id: I3744efa8c87db7fcb743bf8dca4ec6a437a82951
2024-01-24 22:24:37 +00:00
Sharlatan Hellseher
e5923f4f3c
gnu: python-crds: Update to 11.17.14.
* gnu/packages/astronomy.scm (python-crds): Update to 11.17.14.
[description]: Indent it and apply TexInfo style on URLs.

Change-Id: Icd298578cf685cfbc454d5b16b9f89c6d050b93a
2024-01-24 22:24:37 +00:00
Sharlatan Hellseher
25b69fcac8
gnu: libxisf: Update to 0.2.11.
* gnu/packages/astronomy.scm (libxisf): Update to 0.2.11.

Change-Id: I79242d42af3db660c46be0baf05e11ea7ac680f7
2024-01-24 22:24:37 +00:00
Sharlatan Hellseher
eb4cee3a9c
gnu: gpredict: Update home-page and description.
* gnu/packages/astronomy.scm (gpredict)[home-page]: Update it according
to project's README.
[description]: Add feature detailed list.

Change-Id: If5edc6e50796c7753ac47fac082c267145723361
2024-01-24 22:24:37 +00:00