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Author SHA1 Message Date
Ricardo Wurmus
095e64db88
gnu: r-hwriter: Update to 1.3.2.1. 
* gnu/packages/cran.scm (r-hwriter): Update to 1.3.2.1.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus
658842b0fd
gnu: r-hmm: Update to 1.0.1. 
* gnu/packages/cran.scm (r-hmm): Update to 1.0.1.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus
c7ade5c6cc
gnu: r-readxl: Update to 1.4.0. 
* gnu/packages/cran.scm (r-readxl): Update to 1.4.0.
[propagated-inputs]: Remove r-rcpp; add r-cpp11.
[native-inputs]: Add r-knitr.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus
829b934572
gnu: r-mboost: Update to 2.9-6. 
* gnu/packages/cran.scm (r-mboost): Update to 2.9-6.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus
df9bd7785d
gnu: r-ggpmisc: Update to 0.4.6. 
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.4.6.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus
c63d9495ab
gnu: r-ggpp: Update to 0.4.4. 
* gnu/packages/cran.scm (r-ggpp): Update to 0.4.4.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus
bfeafc8b1d
gnu: r-waldo: Update to 0.4.0. 
* gnu/packages/cran.scm (r-waldo): Update to 0.4.0.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus
f233cb384a
gnu: r-datawizard: Update to 0.4.0. 
* gnu/packages/cran.scm (r-datawizard): Update to 0.4.0.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus
418c6aff40
gnu: r-abn: Update to 2.7-0. 
* gnu/packages/bioconductor.scm (r-abn): Update to 2.7-0.
[propagated-inputs]: Add r-graph.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus
ba5e32d9ce
gnu: r-nmf: Update to 0.24.0. 
* gnu/packages/bioconductor.scm (r-nmf): Update to 0.24.0.
 2022-04-12 15:59:51 +02:00
Guillaume Le Vaillant
59377f88ed
gnu: cl-py4cl: Improve package definition. 
This is a follow-up to 917c25b3ba.

* gnu/packages/lisp-xyz.scm (sbcl-py4cl)[propagated-inputs]: Move python
  to...
  [inputs]: ... here.
  [arguments]: Use 'search-input-file' instead of 'which' in
  'fix-python3-path' phase.
 2022-04-12 15:08:08 +02:00
Paul A. Patience
917c25b3ba
gnu: cl-py4cl: Fix path to python3. 
* gnu/packages/lisp-xyz.scm (sbcl-py4cl)[arguments]: Add the
  'fix-python3-path' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-12 13:59:17 +02:00
Paul A. Patience
1f22508a8a
gnu: cl-py4cl: Fix path to py4cl.py. 
* gnu/packages/lisp-xyz.scm (sbcl-py4cl)[arguments]: Fix
  'replace-*base-directory*-var' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-12 13:53:34 +02:00
Attila Lendvai
d3d2881acf
gnu: trezor-agent: Fix it by deleting the sanity-check phase. 
* gnu/packages/finance.scm (trezor-agent)[arguments]: Delete 'sanity-check'
  phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-12 13:39:12 +02:00
Vagrant Cascadian
ba1ce250c8
gnu: genimage: Update to 15. 
* gnu/packages/genimage.scm (genimage): Update to 15.
  [arguments]: Update 'fix-failing-tests phase to reference new files.
 2022-04-11 14:48:35 -07:00
Vagrant Cascadian
8aae96b44c
gnu: genext2fs: Update to 1.5.0. 
* gnu/packages/linux.scm (genext2fs): Update to 1.5.0.
  [source] Update URL.
  [arguments] Remove 'apply-debian-patches phase.
  [home-page] Update URL.
 2022-04-11 14:48:26 -07:00
zimoun
6413d0898b
gnu: Add r-copykat. 
* gnu/packages/bioinformatics.scm (r-copykat): New variable.
 2022-04-11 16:11:45 +02:00
zimoun
b96c0b051d
gnu: Add r-dlm. 
* gnu/packages/cran.scm (r-dlm): New variable.
 2022-04-11 16:11:45 +02:00
zimoun
7cd1dd3e10
gnu: Add r-paralleldist. 
* gnu/packages/cran.scm (r-paralleldist): New variable.
 2022-04-11 16:11:45 +02:00
Ludovic Courtès
88d0b086a9
gnu: openmpi: Remove trailing #t. 
* gnu/packages/mpi.scm (openmpi)[arguments]: Remove trailing #t.
 2022-04-11 15:49:33 +02:00
Ludovic Courtès
46b3b7e5a7
gnu: openmpi: Update to 4.1.3. 
* gnu/packages/mpi.scm (openmpi): Update to 4.1.3.
 2022-04-11 15:49:33 +02:00
Ludovic Courtès
b478d55ac4
gnu: openmpi: Remove input labels. 
* gnu/packages/mpi.scm (openmpi)[inputs]: Remove input labels.
 2022-04-11 15:49:33 +02:00
Ludovic Courtès
649556ea09
gnu: hwloc: Remove trailing #t. 
* gnu/packages/mpi.scm (hwloc-1)[arguments]: Remove trailing #t.
(hwloc-2)[arguments]: Likewise.
 2022-04-11 15:49:33 +02:00
Ludovic Courtès
ac2d36559f
gnu: hwloc@1: Use 'target-arm32?' in conditional. 
Suggested by Maxime Devos.

* gnu/packages/mpi.scm (hwloc-1)[inputs]: Use 'target-arm32?' rather
than custom code.
 2022-04-11 15:49:33 +02:00
Ludovic Courtès
d81d8b1258
gnu: hwloc: Remove input labels. 
* gnu/packages/mpi.scm (hwloc-1)[inputs]: Remove labels.
(hwloc-2)[inputs]: Use 'modify-inputs'.
 2022-04-11 15:49:33 +02:00
Philippe SWARTVAGHER
37fa61364e
gnu: hwloc@1: Update to 1.11.13. 
* gnu/packages/patches/hwloc-1-test-btrfs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mpi.scm (hwloc-1): Use it and update to 1.11.13.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
 2022-04-11 15:49:32 +02:00
Attila Lendvai
2c73e654fe
http-client: Fix redirection. 
* guix/http-client.scm (http-fetch): Use the right uri variable in case of
redirection.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 15:49:32 +02:00
Mădălin Ionel Patrașcu
3704a7b897
gnu: Add r-tricycle. 
* gnu/packages/bioconductor.scm (r-tricycle): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-11 15:39:29 +02:00
Ricardo Wurmus
fc7f807078
gnu: Add python-stopit. 
* gnu/packages/python-xyz.scm (python-stopit): New variable.
 2022-04-11 15:39:29 +02:00
Ricardo Wurmus
6145e25afa
gnu: Add python-yte. 
* gnu/packages/python-xyz.scm (python-yte): New variable.
 2022-04-11 15:39:29 +02:00
Ricardo Wurmus
8499f14a21
gnu: Add python-plac. 
* gnu/packages/python-xyz.scm (python-plac): New variable.
 2022-04-11 15:39:29 +02:00
Ricardo Wurmus
a5412de56e
gnu: Add python-parameterizedtestcase. 
* gnu/packages/python-check.scm (python-parameterizedtestcase): New variable.
 2022-04-11 15:39:29 +02:00
Ricardo Wurmus
c5ee8f6e29
gnu: python-aws-xray-sdk: Update to 2.9.0. 
* gnu/packages/python-web.scm (python-aws-xray-sdk): Update to 2.9.0.
[arguments]: Delete two more test files; disable two tests.
 2022-04-11 15:39:29 +02:00
Marius Bakke
d06287bd16
gnu: python-django@2.2: Update to 2.2.28 [fixes CVE-2022-2834]. 
* gnu/packages/django.scm (python-django-2.2): Update to 2.2.28.
 2022-04-11 15:21:53 +02:00
Marius Bakke
a75411703a
gnu: python-django@3.2: Update to 3.2.13 [fixes CVE-2022-2834]. 
* gnu/packages/django.scm (python-django-3.2): Update to 3.2.13.
 2022-04-11 15:21:53 +02:00
Marius Bakke
98d3b7f10d
gnu: python-django: Update to 4.0.4 [fixes CVE-2022-2834]. 
* gnu/packages/django.scm (python-django-4.0): Update to 4.0.4.
 2022-04-11 15:21:53 +02:00
Ludovic Courtès
087abdb9a2
gnu: Add 'upstream-name' property to the netfilter libraries. 
This allows the 'generic-html' updater to find updates.

* gnu/packages/linux.scm (libnetfilter-conntrack)[properties]: New field.
(libnetfilter-cttimeout)[properties]: New field.
(libnetfilter-cthelper)[properties]: New field.
(libnetfilter-queue)[properties]: New field.
(libnetfilter-acct)[properties]: New field.
(libnetfilter-log)[properties]: New field.
 2022-04-11 13:58:46 +02:00
fesoj000
b805ea194a
gnu: Add ulogd 
* gnu/packages/linux.scm (ulogd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 13:51:07 +02:00
fesoj000
2a1908b48c
gnu: Add libnetfilter-log 
* gnu/packages/linux.scm (libnetfilter-log): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 13:51:07 +02:00
fesoj000
eb1d2ae7e0
gnu: Add nfacct 
* gnu/packages/linux.scm (nfacct): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 13:51:07 +02:00
fesoj000
2d3c33b8ba
gnu: Add libnetfilter-acct 
* gnu/packages/linux.scm (libnetfilter-acct): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 13:51:06 +02:00
fesoj000
f70c8a0276
gnu: Add conntrack-tools 
* gnu/packages/linux.scm (conntrack-tools): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 13:50:38 +02:00
fesoj000
fdfd6ac8ae
gnu: Add libnetfilter-queue 
* gnu/packages/linux.scm (libnetfilter-queue): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 13:49:46 +02:00
fesoj000
6d9cfb91aa
gnu: Add libnetfilter-cthelper 
* gnu/packages/linux.scm (libnetfilter-cthelper): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 13:48:30 +02:00
fesoj000
0f31129e4e
gnu: Add libnetfilter-cttimeout 
* gnu/packages/linux.scm (libnetfilter-cttimeout): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 13:48:28 +02:00
fesoj000
469f85d206
gnu: Add libnetfilter-conntrack 
* gnu/packages/linux.scm (libnetfilter-conntrack): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 13:47:48 +02:00
Julien Lepiller
24851bf6f9
gnu: Add ocaml-core. 
* gnu/packages/ocaml.scm (ocaml-core): New variable.
(ocaml4.07-core): Inherit from it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 11:56:53 +02:00
Julien Lepiller
16e02d2b0e
gnu: ocaml-jane-street-headers: Add variant. 
* gnu/packages/ocaml.scm (ocaml-jane-street-heaers)[properties]: Add
ocaml4.07 variant.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 11:56:52 +02:00
Julien Lepiller
0d7b065b1e
gnu: Add ocaml-timezone. 
* gnu/packages/ocaml.scm (ocaml-timezone): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 11:56:49 +02:00
Julien Lepiller
e2a2c166a1
gnu: Add ocaml-core-kernel. 
* gnu/packages/ocaml.scm (ocaml-core-kernel): New variable.
(ocaml4.07-core-kernel): Inherit from it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-11 11:56:48 +02:00