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Author SHA1 Message Date
Efraim Flashner
0c44bf848c
gnu: rust-fixedbitset-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-fixedbitset-0.1)[arguments]: Skip
build.
[properties]: Remove field.
 2020-01-16 19:36:24 +02:00
Efraim Flashner
ced2466617
gnu: rust-findshlibs-0.5: Don't hide package. 
* gnu/packages/crates-io.scm (rust-findshlibs-0.5)[arguments]: Skip
build. Add rust-lazy-static-1.3, rust-libc-0.2 to cargo-inputs.
[properties]: Remove field.
 2020-01-16 19:36:24 +02:00
Efraim Flashner
1c9d47b642
gnu: rust-filetime-0.2: Update to 0.2.8. 
* gnu/packages/crates-io.scm (rust-filetime-0.2): Update to 0.2.8.
[arguments]: Remove rust-tempdir-0.3 from cargo-development-inputs. Add
rust-tempfile-3.0.
 2020-01-16 19:36:24 +02:00
Efraim Flashner
ef8c91be7f
gnu: rust-filetime-0.2: Don't hide package. 
* gnu/packages/crates-io.scm (rust-filetime-0.2)[arguments]: Skip build.
Add rust-cfg-if-0.1, rust-libc-0.2, rust-redox-syscall-0.1,
rust-winapi-0.3 to cargo-inputs. Add rust-tempdir-0.3 to
cargo-development-inputs.
[properties]: Remove field.
 2020-01-16 19:36:23 +02:00
Efraim Flashner
0441e834a2
gnu: rust-fallible-iterator-0.2: Don't hide package. 
* gnu/packages/crates-io.scm (rust-fallible-iterator-0.2)[arguments]:
Skip build.
[properties]: Remove field.
 2020-01-16 19:36:23 +02:00
Efraim Flashner
a9b5fe4d86
gnu: rust-cmake-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-cmake-0.1)[arguments]: Skip build.
Add rust-cc-1.0 to cargo-inputs.
[properties]: Remove field.
 2020-01-16 19:36:23 +02:00
Efraim Flashner
dca4e6324c
gnu: rust-clicolors-control-1.0: Update to 1.0.1. 
* gnu/packages/crates-io.scm (rust-clicolors-control-1.0): Update to 1.0.1.
 2020-01-16 19:36:23 +02:00
Efraim Flashner
82c2f8840d
gnu: rust-clicolors-control-1.0: Don't hide package. 
* gnu/packages/crates-io.scm (rust-clicolors-control-1.0)[arguments]:
Skip build. Add rust-atty-0.2, rust-lazy-static-1.3, rust-libc-0.2,
rust-winapi-0.3 to cargo-inputs.
[properties]: Remove field.
 2020-01-16 19:36:20 +02:00
Ludovic Courtès
fb8a77f456
gnu: guile-syntax-highlight: Add "guile3.0-syntax-highlight" variant. 
* gnu/packages/guile-xyz.scm (guile-syntax-highlight)[source]: Add
'snippet' and 'modules'.
(guile3.0-syntax-highlight): New field.
 2020-01-16 18:30:57 +01:00
Ludovic Courtès
4f4086848b
gnu: guile-picture-language: Add "guile3.0-picture-language" variant. 
* gnu/packages/guile-xyz.scm (guile3.0-picture-language): New variable.
 2020-01-16 18:30:57 +01:00
Ludovic Courtès
e7921d5ecb
gnu: guile: Add 3.0.0. 
* gnu/packages/guile.scm (guile-3.0): New variable.
(guile-next): Turn into an alias for GUILE-3.0.
 2020-01-16 18:30:57 +01:00
Ludovic Courtès
47212fc763
records: Improve reporting of "invalid field specifier" errors. 
Previously users would just see:

  error: invalid field specifier

without source location or hints.

* guix/records.scm (expand): Add optional 'parent-form' parameter and
pass it to 'syntax-violation' when it is true.
(make-syntactic-constructor): Pass S as a third argument to
'report-invalid-field-specifier'.
* guix/ui.scm (report-load-error): For 'syntax-error', show SUBFORM or
FORM in the message.
* tests/records.scm ("define-record-type* & wrong field specifier"): Add
a 'subform' parameter and adjust test accordingly.
("define-record-type* & wrong field specifier, identifier"): New test.
* tests/guix-system.sh: Add test.
 2020-01-16 18:30:57 +01:00
Ludovic Courtès
84c5da08dd
guix package: Export 'transaction-upgrade-entry'. 
* guix/scripts/package.scm (transaction-upgrade-entry): Add 'store'
parameter and use it instead of (%store).  Export.
* tests/packages.scm ("transaction-upgrade-entry, zero upgrades")
("transaction-upgrade-entry, one upgrade")
("transaction-upgrade-entry, superseded package"): Adjust accordingly.
 2020-01-16 18:30:57 +01:00
Ludovic Courtès
4fe01b09ea
publish: Export 'signed-string'. 
* guix/scripts/publish.scm (signed-string): Export and improve docstring.
* tests/publish.scm ("/*.narinfo")
("/*.narinfo with properly encoded '+' sign"): Adjust accordingly.
 2020-01-16 18:30:57 +01:00
Nicolas Goaziou
a2548a3b5e
gnu: Update copyright header. 
* gnu/packages/python-xyz.scm: Update copyright header.
 2020-01-16 18:06:36 +01:00
Tobias Geerinckx-Rice
d7df48fad4
gnu: neomutt: Update to 20191207. 
* gnu/packages/mail.scm (neomutt): Update to 20191207.
 2020-01-16 17:32:35 +01:00
Tobias Geerinckx-Rice
a8fa39cd08
gnu: lmdb: Update to 0.9.24. 
* gnu/packages/databases.scm (lmdb): Update to 0.9.24.
 2020-01-16 17:32:35 +01:00
Nicolas Goaziou
1b4c5af29c
gnu: asymptote: Fix GUI. 
Fixes bug#39147.

* gnu/packages/plotutils.scm (asymptote)[inputs]: Add missing inputs.
[arguments]: Wrap GUI executable "xasy".
 2020-01-16 17:09:48 +01:00
Nicolas Goaziou
07c8177b88
gnu: Add python-cson. 
* gnu/packages/python-xyz.scm (python-cson): New variable.
 2020-01-16 17:09:48 +01:00
Nicolas Goaziou
602f3b6793
gnu: Add python-speg. 
* gnu/packages/python-xyz.scm (python-speg): New variable.
 2020-01-16 17:09:48 +01:00
zimoun
d14e4745b3
repl: Fix '--help' message. 
* guix/scripts/repl.scm: (show-help): Add '--listen' option message.
 2020-01-16 15:27:24 +01:00
zimoun
e8728862a1
repl: Add '--load-path' option. 
* guix/scripts/repl.scm (%option): Add '--load-path' option.
* doc/guix.texi: Document it.
 2020-01-16 15:27:24 +01:00
zimoun
3c8396b578
edit: Add '--load-path' option. 
* guix/scripts/edit.scm (%option): Add '--load-path' option.
* doc/guix.texi: Document it.
 2020-01-16 15:27:24 +01:00
zimoun
21f4fbdd84
refresh: Add '--load-path' option. 
* guix/scripts/refresh.scm (%option): Add '--load-path' option.
* doc/guix.texi: Document it.
 2020-01-16 15:27:24 +01:00
zimoun
2d4688c1ea
size: Add '--load-path' option. 
* guix/scripts/size.scm (%option): Add '--load-path' option.
* doc/guix.texi: Document it.
 2020-01-16 15:27:24 +01:00
Pierre Neidhardt
ee9a735bc8
graph: Add '--load-path' option. 
* guix/scripts/graph.scm (%option): Add '--load-path' option.
* doc/guix.texi: Document it.
* tests/guix-graph.sh: Test it.
 2020-01-16 15:27:20 +01:00
Christopher Baines
ba07842c34
gnu: cuirass: Update to 0.0.1-27.46f73b6. 
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-27.46f73b6.
 2020-01-16 08:42:59 +00:00
Ricardo Wurmus
d1ac643062
gnu: r-variancepartition: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.16.1.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
e8ccb98a08
gnu: r-flowworkspace: Update to 3.34.1. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 3.34.1.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
3f42bd81a5
gnu: r-ropls: Update to 1.18.6. 
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.6.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
516fa945b3
gnu: r-mlinterfaces: Update to 1.66.2. 
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.2.
[propagated-inputs]: Remove r-rda.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
ac9a9c374c
gnu: r-clusterprofiler: Update to 3.14.3. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.14.3.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
99e2a24978
gnu: r-inspect: Update to 1.16.2. 
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.2.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
7a8fcdaccc
gnu: r-regioner: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.18.1.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
f8f181ae41
gnu: r-affycoretools: Update to 1.58.4. 
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.58.4.
[propagated-inputs]: Add r-glimma.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
d64124df89
gnu: r-delayedarray: Update to 0.12.2. 
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.12.2.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
f7b5c1a02f
gnu: r-iranges: Update to 2.20.2. 
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.20.2.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
fdf69f1ee0
gnu: r-s4vectors: Update to 0.24.2. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.24.2.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus
7241b44ad4
gnu: r-biocstyle: Update to 2.14.4. 
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.14.4.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
8ef91aeb25
gnu: r-poibin: Update to 1.5. 
* gnu/packages/cran.scm (r-poibin): Update to 1.5.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
4fac081a49
gnu: r-gdina: Update to 2.7.8. 
* gnu/packages/cran.scm (r-gdina): Update to 2.7.8.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
951e1d4be7
gnu: r-desolve: Update to 1.27.1. 
* gnu/packages/cran.scm (r-desolve): Update to 1.27.1.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
dedbacdc75
gnu: r-parameters: Update to 0.4.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.4.0.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
82ab1f4ca8
gnu: r-umap: Update to 0.2.4.1. 
* gnu/packages/cran.scm (r-umap): Update to 0.2.4.1.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
697e103ad0
gnu: r-batchtools: Update to 0.9.12. 
* gnu/packages/cran.scm (r-batchtools): Update to 0.9.12.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
a0bb0df325
gnu: r-rttf2pt1: Update to 1.3.8. 
* gnu/packages/cran.scm (r-rttf2pt1): Update to 1.3.8.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
4db8ee8b9a
gnu: r-bookdown: Update to 0.17. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.17.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
f324747843
gnu: r-shinyjs: Update to 1.1. 
* gnu/packages/cran.scm (r-shinyjs): Update to 1.1.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
35bbec27cb
gnu: r-future-apply: Update to 1.4.0. 
* gnu/packages/cran.scm (r-future-apply): Update to 1.4.0.
 2020-01-16 06:53:30 +01:00
Ricardo Wurmus
c7040fe4ad
gnu: r-tmb: Update to 1.7.16. 
* gnu/packages/cran.scm (r-tmb): Update to 1.7.16.
 2020-01-16 06:53:30 +01:00