Commit graph

79291 commits

Author SHA1 Message Date
Ricardo Wurmus
0cc4deb017
gnu: r-gdsfmt: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.28.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
d0c36449d2
gnu: r-watermelon: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-watermelon): Update to 1.36.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
125ffdf788
gnu: r-roc: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-roc): Update to 1.68.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
bb3ef4894b
gnu: r-genie3: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.14.0.
[propagated-inputs]: Add r-dplyr.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
d37ae38d19
gnu: r-circrnaprofiler: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-circrnaprofiler): Update to 1.6.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
cec7972759
gnu: r-cicero: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.10.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
f9049add35
gnu: r-rcistarget: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.12.0.
[propagated-inputs]: Add r-arrow, r-dplyr, r-genomeinfodb, r-genomicranges, and r-tibble.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
9c0b691a29
gnu: r-depecher: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.8.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
480dcf3038
gnu: r-mixomics: Update to 6.16.0.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
9ed2ec5bff
gnu: r-flowsom: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-flowsom): Update to 2.0.0.
[propagated-inputs]: Remove r-tsne; add r-colorramps, r-dplyr, r-ggforce, r-ggnewscale,
r-ggplot2, r-ggpointdensity, r-ggpubr, r-ggrepel, r-magrittr,
r-pheatmap, r-rlang, r-rtsne, r-scattermore, and r-tidyr.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
53c041713a
gnu: r-opencyto: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.4.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
6489371b80
gnu: r-flowstats: Update to 4.4.0.
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.4.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
a1557adfcf
gnu: r-rprotobuflib: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.4.0.
[arguments]: Adjust build phase "unpack-bundled-sources".
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
c474b4784e
gnu: r-flowclust: Update to 3.30.0.
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.30.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
57a41cd789
gnu: r-flowviz: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.56.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
417b4108bc
gnu: r-ggcyto: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.20.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
5e49dfd00e
gnu: r-flowmeans: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.52.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
19855b595c
gnu: r-flowcore: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.4.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
4299d97756
gnu: r-consensusclusterplus: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.56.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
6a7589de24
gnu: r-flowutils: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-flowutils): Update to 1.56.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
db56495f39
gnu: r-rsubread: Update to 2.6.1.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.6.1.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
758c1cd3c2
gnu: r-annotatr: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.18.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
28472b62d3
gnu: r-biosigner: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.20.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
3501292721
gnu: r-ropls: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.24.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
3d9b6386fa
gnu: r-multidataset: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.20.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
f9c306eb01
gnu: r-birewire: Update to 3.24.0.
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.24.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
ec78a01db3
gnu: r-rqc: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-rqc): Update to 1.26.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
f039c22c97
gnu: r-quasr: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.32.0.
[propagated-inputs]: Remove r-genomicalignments and r-rhisat2.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
274b1e2e16
gnu: r-rhisat2: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.8.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
eca0820c77
gnu: r-sgseq: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-sgseq): Update to 1.26.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
0e74fff5eb
gnu: r-rbowtie: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-rbowtie): Update to 1.32.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
69295659be
gnu: r-iclusterplus: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.28.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
46fc0334ff
gnu: r-biocfilecache: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 2.0.0.
[propagated-inputs]: Add r-filelock.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
1dce605505
gnu: r-arrmnormalization: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.32.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
7cf4911aa2
gnu: r-progeny: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.14.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
25ba2d38a1
gnu: r-rbowtie2: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 1.14.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
6145252f1a
gnu: r-zfpkm: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.14.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
fc400d10c0
gnu: r-zinbwave: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-zinbwave): Update to 1.14.1.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
34137c2145
gnu: r-webbioc: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.64.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
3a7ad7fb8a
gnu: r-widgettools: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.70.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
e91b4088f2
gnu: r-wiggleplotr: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.16.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
2da5ef4c55
gnu: r-wrench: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-wrench): Update to 1.10.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
d463b4006d
gnu: r-xcms: Update to 3.14.0.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.14.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
ef30a43ec7
gnu: r-massspecwavelet: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.58.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
48737e92e4
gnu: r-roar: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-roar): Update to 1.28.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
4a9e3d2fbe
gnu: r-yarn: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-yarn): Update to 1.18.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
8d6a721a94
gnu: r-quantro: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-quantro): Update to 1.26.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
a72006c9b0
gnu: r-gcrma: Update to 2.64.0.
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.64.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
995c43885e
gnu: r-yapsa: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.18.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
774e916736
gnu: r-somaticsignatures: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.28.0.
2021-06-05 09:12:50 +02:00