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Author SHA1 Message Date
Ludovic Courtès
0db906c52c
services: cuirass: Do not export record type descriptors. 
* gnu/services/cuirass.scm (<cuirass-remote-server-configuration>)
(<cuirass-configuration>, <cuirass-remote-worker-configuration>): Do not
export.
 2021-06-01 23:26:07 +02:00
Ludovic Courtès
ec9307ea07
services: cuirass: Create the profile and GC root directory. 
* gnu/services/cuirass.scm (cuirass-activation): Create
/var/guix/profiles/per-user/cuirass/cuirass or similar.
 2021-06-01 23:26:07 +02:00
Ludovic Courtès
82d8ab01f5
maint: Require Guile 3.0. 
* configure.ac: Require Guile 3.0.
* doc/guix.texi (Requirements): Adjust accordingly.
* gnu/packages/package-management.scm (guile2.2-guix): Remove.
* guix/lint.scm (exception-with-kind-and-args?): Remove 'cond-expand'.
* guix/scripts/deploy.scm (deploy-machine*): Likewise.
* guix/store.scm (call-with-store): Likewise.
* guix/swh.scm (http-get*, http-post*): Likewise.
* guix/ui.scm (without-compiler-optimizations, guard*)
(call-with-error-handling): Likewise.
 2021-06-01 23:26:07 +02:00
Efraim Flashner
49b15701ad
gnu: llvm-7: Update to 7.1.0. 
* gnu/packages/llvm.scm (llvm-7): Update to 7.1.0.
 2021-06-01 22:50:47 +03:00
Marius Bakke
8d14d602ea
gnu: unbound: Enable DoH support. 
* gnu/packages/dns.scm (unbound)[inputs]: Add NGHTTP2:LIB.
[arguments]: Add "--with-libnghttp2" to #:configure-flags.
 2021-06-01 20:21:54 +02:00
Marius Bakke
304895d5e0
gnu: ungoogled-chromium: Update to 91.0.4472.77-0.6802c88. 
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 91.
(%chromium-version): Set to 91.0.4472.77.
(%ungoogled-revision): Set to 91.0.4472.77-1-0-g6802c88.
(%debian-patches): Remove obsolete patch.
(%ungoogled-origin): Update hash.
(ungoogled-chromium-snippet): Add substitution for an unbundling file.
(ungoogled-chromium): Update hash.
[arguments]: Add a substitution previously provided by a Debian patch.
[inputs]: Change from ICU-68 to ICU-69.
 2021-06-01 20:21:54 +02:00
Marius Bakke
e54c03c1f5
gnu: icu4c: Add 69.1. 
* gnu/packages/icu4c.scm (icu4c-69): New public variable.
 2021-06-01 20:21:54 +02:00
Efraim Flashner
9ea6e3f4d8
gnu: gcc-9: Update to 9.4.0. 
* gnu/packages/gcc.scm (gcc-9): Update to 9.4.0.
 2021-06-01 20:54:06 +03:00
Leo Prikler
cb821238ed
gnu: musescore: Add missing QML imports. 
This fixes an issue wherein the palettes sidebar would turn up empty.

* gnu/packages/music.scm (musescore)[build-system]: Use qt-build-systems.
[inputs]: Add qtgraphicaleffects.
 2021-06-01 18:52:48 +02:00
Jonathan Brielmaier
776a21a096
gnu: rust-cbindgen@0.17: Update to 0.19.0. 
* gnu/packages/rust-apps.scm (rust-cbindgen-0.17): Update to 0.19.0 and
rename to rust-cbindgen-0.19.
 2021-06-01 17:59:34 +02:00
Mathieu Othacehe
0b76b25a0e
tests: hpcguix-web: Fix it. 
* gnu/tests/web.scm (run-hpcguix-web-server-test): Increase the VM memory size
and add retries for the http-get test.
 2021-06-01 14:33:27 +02:00
Roel Janssen
7ae2b1f2dc
gnu: Add bamutils. 
* gnu/packages/bioinformatics.scm (bamutils): New variable.
 2021-06-01 13:14:38 +02:00
Pierre Neidhardt
b4e3b77270
gnu: sbcl: Update to 2.1.5. 
* gnu/packages/lisp.scm (sbcl): Update to 2.1.5.
 2021-06-01 12:01:24 +02:00
Paul Garlick
641a88e8c8
gnu: Add python-vedo. 
* gnu/packages/python-science.scm (python-vedo): New variable.
 2021-06-01 10:24:46 +01:00
Paul Garlick
d769fcd683
gnu: vtk: Wrap python modules. 
* gnu/packages/image-processing.scm (vtk)[inputs]: Add python.
[arguments]: Add VTK_WRAP_PYTHON and VTK_PYTHON_VERSION flags.
 2021-06-01 10:19:48 +01:00
Mathieu Othacehe
fd0650eebe
gnu: guix: Update to 1.3.0-3.50dfbbf. 
* gnu/packages/package-management.scm (guix): Update to 1.3.0-3.50dfbbf.
 2021-06-01 11:03:45 +02:00
Roel Janssen
50dfbbf8ef
gnu: Add python-sinfo. 
* gnu/packages/python-xyz.scm (python-sinfo): New variable.
 2021-06-01 10:18:00 +02:00
Roel Janssen
b346a7c7db
gnu: Add python-stdlib-list. 
* gnu/packages/python-xyz.scm (python-stdlib-list): New variable.
 2021-06-01 10:13:38 +02:00
Christopher Baines
a6a1939251
gnu: guix-build-coordinator: Update to 0-30.f9af463. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to 0-30.f9af463.
 2021-06-01 09:01:58 +01:00
Brice Waegeneire
ea55e1355b
services: dnsmasq: Extend 'activation-service'. 
* gnu/services/dns.scm (dnsmasq-activation): New procedure …
(dnsmasq-service-type): … use it.
 2021-05-31 22:06:54 +02:00
Brice Waegeneire
62a8d487d6
services: hostapd: Use package from configuration. 
* gnu/services/networking.scm (hostapd-shepherd-services): Replace
'hostapd' by the package specified in the configuration.
 2021-05-31 22:04:57 +02:00
Brice Waegeneire
8a0dc5f1bf
tests: Fix loadable-kernel-modules-service tests. 
* gnu/tests/linux-modules.scm
(run-loadable-kernel-modules-service-test): Actually load the modules
with kernel-module-loader-service-type.  Use a singleton service instead
of defining a custom one.
* doc/guix.texi (Service Reference): To give an example of
linux-loadable-module-service-type use a singleton instead of defining a
new service.
 2021-05-31 21:57:26 +02:00
Nicolas Goaziou
eb8928eeba
gnu: emacs-tramp: Update to 2.5.0.5. 
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.0.5.
 2021-05-31 21:37:53 +02:00
Nicolas Goaziou
93744e470b
gnu: emacs-solaire-mode: Update to 2.0.0. 
* gnu/packages/emacs-xyz.scm (emacs-solaire-mode): Update to 2.0.0.
 2021-05-31 21:37:15 +02:00
Nicolas Goaziou
4e74d25d85
gnu: texmacs: Update to 1.99.21. 
* gnu/packages/text-editors.scm (texmacs): Update to 1.99.21.
 2021-05-31 21:35:53 +02:00
Nicolas Goaziou
5af640b6d7
gnu: emacs-moody: Update to 0.5.5. 
* gnu/packages/emacs-xyz.scm (emacs-moody): Update to 0.5.5.
 2021-05-31 21:25:28 +02:00
Nicolas Goaziou
6cdc1c72f1
gnu: emacs-posframe: Update to 1.0.3. 
* gnu/packages/emacs-xyz.scm (emacs-posframe): Update to 1.0.3.
 2021-05-31 21:24:15 +02:00
Solene Rapenne via Guix-patches via
4092813037
gnu: lagrange: Update to 1.5.0. 
* gnu/packages/web-browsers.scm (lagrange): Update to 1.5.0.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-05-31 21:06:36 +02:00
Stefan Reichör
d16ddafcc7
gnu: Add emacs-eyebrowse. 
* gnu/packages/emacs-xyz.scm (emacs-eyebrowse): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-05-31 21:05:57 +02:00
Stefan Reichör
71854b7dfe
gnu: Add python-easy-ansi. 
* gnu/packages/python-xyz.scm (python-easy-ansi): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-05-31 21:05:03 +02:00
Xinglu Chen
dafd3265ad
gnu: Add emacs-evil-paredit. 
* gnu/packages/emacs-xyz.scm (emacs-evil-paredit): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-05-31 21:03:09 +02:00
Solene Rapenne via Guix-patches via
f7825ee85a
gnu: tome4: Update to 1.7.3. 
* gnu/packages/games.scm (tome4): Update to 1.7.3.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-05-31 20:59:29 +02:00
Ricardo Wurmus
f463f376e9
gnu: bits: Use git-version and git-file-name. 
* gnu/packages/bioinformatics.scm (bits)[version]: Use git-version.
[source]: Use git-file-name.
 2021-05-31 16:10:20 +02:00
Ricardo Wurmus
d1e1c02e28
gnu: piranha: Use git-version. 
* gnu/packages/bioinformatics.scm (piranha)[version]: Use git-version.
 2021-05-31 16:10:00 +02:00
Ricardo Wurmus
8c033085cc
gnu: r-chipkernels: Use git-version and git-file-name. 
* gnu/packages/bioinformatics.scm (r-chipkernels)[version]: Use git-version.
[source]: Use git-file-name.
 2021-05-31 16:09:35 +02:00
Ricardo Wurmus
3acfbd4811
gnu: f-seq: Use git-version and git-file-name. 
* gnu/packages/bioinformatics.scm (f-seq)[version]: Use git-version.
[source]: Use git-file-name.
 2021-05-31 16:09:07 +02:00
Ricardo Wurmus
09b50a6ec2
gnu: bismark: Use git-file-name. 
* gnu/packages/bioinformatics.scm (bismark)[source]: Use git-file-name.
 2021-05-31 16:08:47 +02:00
Ricardo Wurmus
f383f9e311
gnu: filevercmp: Use git-version. 
* gnu/packages/bioinformatics.scm (filevercmp)[version]: Use git-version; bind
"revision" in outer let.
 2021-05-31 16:08:12 +02:00
Ricardo Wurmus
ec543ba672
gnu: r-chipseeker: Move out of experiment section. 
* gnu/packages/bioconductor.scm (r-chipseeker): Move the package from the
"experiment" section to the section for regular Bioconductor packages.
 2021-05-31 15:54:41 +02:00
Ricardo Wurmus
a6e7afd4d5
gnu: r-spp: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-spp): Move from here...
* gnu/packages/bioconductor.scm (r-spp): ...to here.
 2021-05-31 15:53:20 +02:00
Ricardo Wurmus
1a6108ce2b
gnu: r-geneoverlap: Move out of experiment section. 
* gnu/packages/bioconductor.scm (r-geneoverlap): Move the package definition
out of the "experiment" section into the section for regular Bioconductor
packages.
 2021-05-31 15:53:09 +02:00
Ricardo Wurmus
b0ecd6cea9
gnu: r-phantompeakqualtools: Let-bind commit, set revision to 1. 
* gnu/packages/bioinformatics.scm (r-phantompeakqualtools): Bind the commit
outside of the package value.
[version]: Use git-version.
[source]: Use git-file-name.
 2021-05-31 15:46:30 +02:00
zimoun
c294c0d782
gnu: r-methylkit: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-methylkit): Move from here...
* gnu/packages/bioconductor.scm (r-methylkit): ...to here.
 2021-05-31 15:39:49 +02:00
zimoun
7ab44aeed6
gnu: r-copywriter: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-copywriter): Move from here...
* gnu/packages/bioconductor.scm (r-copywriter): ...to here.
 2021-05-31 15:39:49 +02:00
zimoun
36cb01066c
gnu: r-copyhelper: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-copyhelper): Move from here...
* gnu/packages/bioconductor.scm (r-copyhelper): ...to here.
[source]: Repalce 'string-append' by 'bioconductor-uri' with 'experiment.
 2021-05-31 15:39:47 +02:00
zimoun
31e50e1f48
gnu: r-chipseq: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-chipseq): Move from here...
* gnu/packages/bioconductor.scm (r-chipseq): ...to here.
 2021-05-31 15:39:00 +02:00
zimoun
0eaa75c811
gnu: r-rhdf5: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-rhdf5): Move from here...
* gnu/packages/bioconductor.scm (r-rhdf5): ...to here.
 2021-05-31 15:39:00 +02:00
zimoun
cc1dbea883
gnu: r-annotationfilter: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-annotationfilter): Move from here...
* gnu/packages/bioconductor.scm (r-annotationfilter): ...to here.
 2021-05-31 15:39:00 +02:00
zimoun
67e99369c1
gnu: r-rhdf5filters: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-rhdf5filters): Move from here...
* gnu/packages/bioconductor.scm (r-rhdf5filters): ...to here.
 2021-05-31 15:39:00 +02:00
zimoun
b6e84d30eb
gnu: r-tximport: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-tximport): Move from here...
* gnu/packages/bioconductor.scm (r-tximport): ...to here.
 2021-05-31 15:39:00 +02:00