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Author SHA1 Message Date
Ludovic Courtès
79f912c710
Revert "gnu: openexr: Add IlmBase include sub-directory to 'OpenEXR.pc'." 
This reverts commit 01fe019166,
which was unneeded because IlmBase is already listed as 'Requires'
in 'OpenEXR.pc'.
 2017-04-05 22:45:41 +02:00
Tobias Geerinckx-Rice
b28187cd0c
Revert "gnu: bc: Update to 1.07." 
This reverts commit dfee7daedb.  It causes
the linux-libre@4.9 build to hang (command-line usage works fine).
 2017-04-05 21:23:41 +02:00
Kei Kebreau
cd381c317b
gnu: Move audacity to audio.scm. 
* gnu/packages/audacity.scm: Remove file and move audacity...
* gnu/packages/audio.scm: ...here.
* gnu/local.mk: Remove reference to removed file.
 2017-04-05 15:08:14 -04:00
Ricardo Wurmus
5ae63362ae
import cran: Distinguish Bioconductor data packages. 
* guix/import/cran.scm (bioconductor-package?): Exclude Bioconductor
data packages.
(bioconductor-data-package?): New procedure.
 2017-04-05 18:38:51 +02:00
Ricardo Wurmus
1108a920bd
gnu: sra-tools: Fix glibc naming conflict. 
* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Add build phase
"patch-away-glibc-conflict" to fix a definition conflict with glibc 2.25.
 2017-04-05 18:06:51 +02:00
Ricardo Wurmus
beebe43176
gnu: sra-tools: Use "modify-phases" syntax. 
* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use "modify-phases"
syntax.
 2017-04-05 18:06:51 +02:00
Ben Woodcroft
fc5b12879f
gnu: diamond: Update to 0.8.37. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.37.
 2017-04-05 22:49:01 +10:00
Leo Famulari
b23c1a71be
download: Update the GnuPG mirror list. 
* guix/download.scm (%mirrors) <gnupg>: Use HTTP for TU Wien mirror.
 2017-04-05 07:07:35 -04:00
Thomas Danckaert
52b2d666ca
gnu: kdevelop: Update to 5.1.0. 
* gnu/packages/kde.scm (kdevelop, kdevplatform): Update to 5.1.0.
 2017-04-05 12:12:34 +02:00
Tobias Geerinckx-Rice
dfee7daedb
gnu: bc: Update to 1.07. 
* gnu/packages/algebra.scm (bc): Update to 1.07.
[native-inputs]: Add ed and texinfo.
[arguments]: Use default ‘configure’ phase.
 2017-04-05 03:31:58 +02:00
Tobias Geerinckx-Rice
f0bacad682
gnu: bc: Actually use readline. 
* gnu/packages/algebra.scm (bc)[arguments]: Add ‘--with-readline’
to #:configure-flags.
 2017-04-05 03:31:58 +02:00
Tobias Geerinckx-Rice
5894b60491
gnu: algebra: Re-order imports. 
* gnu/packages/algebra.scm: Order imports alphabetically.
 2017-04-05 03:31:58 +02:00
Ludovic Courtès
01fe019166
gnu: openexr: Add IlmBase include sub-directory to 'OpenEXR.pc'. 
* gnu/packages/graphics.scm (openexr)[arguments]: Add
'set-ilmbase-directory-in-pc-file' phase.
 2017-04-05 00:53:03 +02:00
Ludovic Courtès
f84011d04a
services: cuirass: Wait for networking. 
* gnu/services/cuirass.scm (cuirass-shepherd-service): Add 'networking'
to 'requirements'.
 2017-04-05 00:53:03 +02:00
Chris Marusich
1c6b2d3f98
build: Export register-root procedure. 
* guix/scripts/build.scm: Export register-root procedure.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-05 00:53:03 +02:00
Clément Lassieur
8db947169f
gnu: icecat: Use bundled ICU to avoid crashes. 
* gnu/packages/gnuzilla.scm (icecat)[arguments] <#:configure-flags>:
Temporarily comment out "--with-system-icu".
 2017-04-04 20:18:38 +02:00
Clément Lassieur
cca906754d
gnu: icecat: Re-enable parallel build. 
* gnu/packages/gnuzilla.scm (icecat)[arguments]: Re-enable parallel build.
 2017-04-04 20:18:38 +02:00
Marius Bakke
33b2520175
gnu: python-django: Specify CPE name. 
* gnu/packages/django.scm (python-django, python2-django)[properties]: Add
"cpe-name".
 2017-04-04 18:30:52 +02:00
Marius Bakke
dcc9b6abc7
gnu: python-django: Update to 1.10.7 [fixes CVE-2017-7233 and CVE-2017-7234]. 
* gnu/packages/django.scm (python-django, python2-django): Update to 1.10.7.
 2017-04-04 18:01:32 +02:00
Marius Bakke
4dc12417d2
gnu: gnupg: Update to 2.1.20. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.20.
[source]: Remove patch.
* gnu/packages/patches/gnupg-2.1-fix-Y2038-test-failure.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-04-04 17:46:28 +02:00
Marius Bakke
a3dea99107
gnu: python2-cython: Fix build on 32-bit platforms. 
* gnu/packages/python.scm (python-cython, python2-cython)[source]: Add patch.
* gnu/packages/patches/python-cython-fix-tests-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-04-04 17:46:28 +02:00
Mark Meyer
6beaa5a02a
gnu: moc: Add Ogg Vorbis support. 
* gnu/packages/music.scm (moc)[inputs]: Add libogg and libvorbis.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-04-04 15:16:25 +02:00
Mark Meyer
0d78e37746
gnu: Add qjackctl. 
* gnu/packages/audio.scm (qjackctl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-04 14:30:00 +02:00
Ludovic Courtès
b7506f74df
gnu: glog: Fix name demangling for GCC 5. 
* gnu/packages/patches/glog-gcc-5-demangling.patch: New file.
* gnu/packages/logging.scm (glog)[sources]: Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-04-04 14:30:00 +02:00
Leo Famulari
6c17422eac
utils: Fix handling of shell arguments for xz compression. 
Fixes test failures related to xz compression in tests/utils.scm.

This is a followup to commit 63102406f2.

* guix/utils.scm (decompressed-port, compressed-port, compressed-output-port):
Split each shell argument into its own list element.
 2017-04-03 23:23:39 -04:00
Tobias Geerinckx-Rice
f49ced6827
gnu: youtube-dl: Update to 2017.04.03. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.04.03.
 2017-04-04 00:17:58 +02:00
Tobias Geerinckx-Rice
f751b7596d
gnu: perl-email-simple: Update to 2.213. 
* gnu/packages/mail.scm (perl-email-simple): Update to 2.213.
 2017-04-04 00:17:58 +02:00
Tobias Geerinckx-Rice
e26f2c67d6
gnu: perl-email-mime: Update to 1.940. 
* gnu/packages/mail.scm (perl-email-mime): Update to 1.940.
 2017-04-04 00:17:57 +02:00
Tobias Geerinckx-Rice
153ea992e8
gnu: perl-lingua-en-tagger: Update to 0.28. 
* gnu/packages/language.scm (perl-lingua-en-tagger): Update to 0.28.
 2017-04-04 00:17:29 +02:00
Tobias Geerinckx-Rice
5b5b4edfcc
gnu: perl-lingua-en-number-isordinal: Update to 0.05. 
* gnu/packages/language.scm (perl-lingua-en-number-isordinal): Update to 0.05.
 2017-04-04 00:17:29 +02:00
Tobias Geerinckx-Rice
e2fb341f8f
gnu: perl-lingua-en-inflect-number: Update to 1.12. 
* gnu/packages/language.scm (perl-lingua-en-inflect-number): Update to 1.12.
 2017-04-04 00:17:29 +02:00
Tobias Geerinckx-Rice
3581c3571a
gnu: perl-lingua-en-inflect: Update to 1.901. 
* gnu/packages/language.scm (perl-lingua-en-inflect): Update to 1.901.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice
84f06e540c
gnu: perl-lingua-en-findnumber: Update to 1.32. 
* gnu/packages/language.scm (perl-lingua-en-findnumber): Update to 1.32.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice
dd0cfb37da
gnu: perl-db-file: Update to 1.840. 
* gnu/packages/databases.scm (perl-db-file): Update to 1.840.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice
2273b75154
gnu: perl-dbd-sqlite: Update to 1.54. 
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.54.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice
4d40c6aab0
gnu: perl-dbd-pg: Update to 3.5.3. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.5.3.
 2017-04-04 00:17:28 +02:00
Ludovic Courtès
f73bb91ebe
tests: Adjust search-paths test following the introduction of aarch64. 
Fixes a regression introduced in
3b88f3767d.

* tests/search-paths.scm ("evaluate-search-paths, separator is #f"):
Change the expected result to "aarch64-linux".
 2017-04-04 00:10:00 +02:00
Ludovic Courtès
76c486196f
packages: Catch invalid input errors for structs. 
Reported by Thomas Sigurdsen <thomas.sigurdsen@gmail.com>
at <https://lists.gnu.org/archive/html/help-guix/2017-04/msg00007.html>.

* guix/packages.scm (expand-input): Add 'guard' form around call to
'package-source-derivation'.
* tests/packages.scm (dummy): New test.
 2017-04-04 00:10:00 +02:00
Ludovic Courtès
3e43166ffc
gexp: 'lower-object' raises an exception when passed an invalid object. 
* guix/gexp.scm (&gexp-error, &gexp-input-error): New error conditions.
(lower-object): Raise &gexp-input-error when 'lookup-compiler' returns #f.
* tests/gexp.scm ("lower-object & gexp-input-error?"): New test.
* guix/ui.scm (call-with-error-handling): Add case for 'gexp-input-error?'.
 2017-04-04 00:10:00 +02:00
Muriithi Frederick Muriuki
b98d4ec0aa
gnu: Add python-mando-0.3.1 
* gnu/packages/python.scm (python-mando-0.3.1): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-04 00:10:00 +02:00
Thomas Danckaert
b4dcfce51b
gnu: Add cifs-utils. 
* gnu/packages/samba.scm (cifs-utils): New variable.
 2017-04-03 21:45:53 +02:00
Marius Bakke
350a30845c
gnu: python-pexpect: Use python-pytest@3.0. 
* gnu/packages/python.scm (python-pexpect, python2-pexpect)[native-inputs]:
Change PYTHON-PYTEST to PYTHON-PYTEST-3.0.
 2017-04-03 19:25:57 +02:00
Marius Bakke
26bad5d7eb
gnu: nss, nss-certs: Update to 3.30. 
* gnu/packages/gnuzilla.scm (nss): Update to 3.30.
* gnu/packages/certs.scm (nss-certs): Update to 3.30.
* gnu/packages/patches/nss-increase-test-timeout.patch: Adjust patch context.
 2017-04-03 19:25:57 +02:00
Marius Bakke
cd158a2b77
gnu: python-cython: Update to 0.25.2. 
* gnu/packages/python.scm (python-cython, python2-cython): Update to 0.25.2.
 2017-04-03 19:25:56 +02:00
Kei Kebreau
9a49129651
gnu: audacity: Update to 2.1.3. 
* gnu/packages/audacity.scm (audacity): Update to 2.1.3.
[source]: Fetch gzipped tar archive instead of a zip archive; remove
unnecessary patch.
[native-inputs]: Add autoconf, automake and libtool.
[arguments]: Add autoreconf phase to detect system libraries.
* gnu/packages/patches/audacity-fix-ffmpeg-binding.patch: Delete patch.
* gnu/local.mk: Remove reference to removed patch.
 2017-04-03 11:51:52 -04:00
Arun Isaac
568f977f9c
gnu: emacs-elfeed: Enable tests. 
* gnu/packages/emacs.scm (emacs-elfeed)[arguments]: Add a 'check' phase.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-02 23:08:55 -04:00
Leo Famulari
b53fa16f9c
gnu: brdf-explorer: Use HTTPS source URL. 
* gnu/packages/graphics.scm (brdf-explorer)[source]: Use HTTPS URL.
 2017-04-02 20:00:52 -04:00
Leo Famulari
7bf837fd43
gnu: Use HTTPS URLs for GitHub home-pages. 
* gnu/packages/bioinformatics.scm, gnu/packages/emacs.scm,
gnu/packages/haskell.scm, gnu/packages/libffi.scm, gnu/packages/lisp.scm,
gnu/packages/ocaml.scm, gnu/packages/openstack.scm, gnu/packages/python.scm,
gnu/packages/ruby.scm, gnu/packages/shells.scm, gnu/packages/statistics.scm,
gnu/packages/xdisorg.scm: Use HTTPS URLs for all packages with a home-page on
GitHub.
 2017-04-02 20:00:51 -04:00
Leo Famulari
9167488490
gnu: jbig2dec: Fix CVE-2016-9601. 
* gnu/packages/patches/jbig2dec-CVE-2016-9601.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (jbig2dec)[source]: Use it.
 2017-04-02 19:38:56 -04:00
Ludovic Courtès
2a0d5de5a9
Merge branch 'core-updates' 2017-04-03 00:13:06 +02:00