ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2024-12-27 06:42:14 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions
44194 commits 1 branch 0 tags 448 MiB
Commit graph

44194 commits

This branch
This branch
All branches
Author SHA1 Message Date
Ricardo Wurmus
5e0241db84
gnu: Add r-quasr. 
* gnu/packages/bioconductor.scm (r-quasr): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus
5865606459
gnu: Add r-rhisat2. 
* gnu/packages/bioconductor.scm (r-rhisat2): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus
1444153913
gnu: Add r-sgseq. 
* gnu/packages/bioconductor.scm (r-sgseq): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus
30f1029f4c
gnu: Add r-xgboost. 
* gnu/packages/cran.scm (r-xgboost): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus
29591ca611
gnu: Add r-citr. 
* gnu/packages/cran.scm (r-citr): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
afc4370d4c
gnu: Add r-refmanager. 
* gnu/packages/cran.scm (r-refmanager): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
85625cae66
gnu: Add r-ggfortify. 
* gnu/packages/cran.scm (r-ggfortify): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
c9487dfadc
gnu: Add r-plot3d. 
* gnu/packages/cran.scm (r-plot3d): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
70debac5f1
gnu: Add r-enrichr. 
* gnu/packages/cran.scm (r-enrichr): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
5bea832f72
gnu: Add r-dalex. 
* gnu/packages/cran.scm (r-dalex): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
4d06ef4b71
gnu: Add r-rbowtie. 
* gnu/packages/bioconductor.scm (r-rbowtie): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
8c42f8f6e8
gnu: Add r-iclusterplus. 
* gnu/packages/bioconductor.scm (r-iclusterplus): New variable.
 2019-05-10 13:31:01 +02:00
Mark H Weaver
b40a36baff
gnu: linux-libre: Update to 5.1. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.
(%linux-libre-hash): Update hash.
(%linux-libre-5.0-patches): Rename to ...
(%linux-libre-5.1-patches): ... this.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-veyron)
(linux-libre-arm-omap2plus): Use %linux-libre-5.1-patches.
(vhba-module): Move definition below the kernel packages.
* gnu/packages/aux-files/linux-libre/5.0-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.0-arm.conf,
gnu/packages/aux-files/linux-libre/5.0-arm64.conf,
gnu/packages/aux-files/linux-libre/5.0-i686.conf,
gnu/packages/aux-files/linux-libre/5.0-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.1-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.1-arm.conf,
gnu/packages/aux-files/linux-libre/5.1-arm64.conf,
gnu/packages/aux-files/linux-libre/5.1-i686.conf,
gnu/packages/aux-files/linux-libre/5.1-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
 2019-05-10 00:00:49 -04:00
Ivan Petkov
3d8033af42
gnu: rust: Update to 1.34.1. 
* gnu/packages/rust.scm (rust): Update to 1.34.1.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:09 +02:00
Ivan Petkov
4ed20d3cfe
gnu: rust: Make source derivations smaller. 
* gnu/packages/rust.scm (rust-source-pre-1.32): Delete procedure.
(rust-bootstrapped-package-pre-1.32): Delete procedure.
(rust-bootstrapped-package): Remove optional keys, and return an origin.
(rust-uri): New variable.
(mrustc): Change native-input "rust" to use source of rust-1.19.
(rust-1.19)[source]: Define package source.
(rust-1.20): Use rust-bootstrapped-package.
(rust-1.21): Likewise.
(rust-1.22): Likewise.
(rust-1.23): Likewise.
(rust-1.24): Likewise.
(rust-1.25): Likewise.
(rust-1.26): Likewise.
(rust-1.27): Likewise.
(rust-1.28): Likewise.
(rust-1.29): Likewise.
(rust-1.30): Likewise.
(rust-1.31): Likewise.
(rust-1.32): Likewise.
(rust-1.33): Likewise.
(rust-1.34): Likewise.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:09 +02:00
Ivan Petkov
bea01c0d2b
gnu: rust: Delete install logs and manifests. 
* gnu/packages/rust.scm (rust-1.20)[arguments]<#:phases>[delete-install-logs]:
New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:08 +02:00
Ivan Petkov
e88735b45f
build/cargo-utils: Remove "src-name" parameter. 
* gnu/packages/gnuzilla.scm (icecat)[arguments]<#:phases>
[patch-cargo-checksums]: Delete "null-file" variable.
* gnu/packages/rust.scm (%cargo-reference-project-file): Delete variable.
* gnu/packages/rust.scm (rust-1.19): Remove reference to
"%cargo-reference-project-file".
* guix/build/cargo-utils.scm (generate-checksums): Remove "src-name"
parameter.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:08 +02:00
Ricardo Wurmus
d78010b81e
gnu: gcc-4.7: Hide package. 
* gnu/packages/gcc.scm (gcc-4.7): Wrap in "hidden-package" expression.
 2019-05-09 23:18:39 +02:00
Ricardo Wurmus
935568d5ce
gnu: emacs-dash: Update to 2.16.0. 
* gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.16.0.
 2019-05-09 22:51:33 +02:00
Ricardo Wurmus
b97b4624d0
gnu: Add guile-file-names. 
* gnu/packages/guile-xyz.scm (guile-file-names): New variable.
 2019-05-09 22:41:14 +02:00
Tobias Geerinckx-Rice
ae623b3f9d
gnu: seabios: Update to 1.12.1. 
This is a stable release despite the missing tarball.
<https://mail.coreboot.org/hyperkitty/list/seabios@seabios.org/thread/ONGRJVF3A45SAXOKBED52V2UD3YUWTRT/>

* gnu/packages/firmware.scm (seabios): Update to 1.12.1.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
 2019-05-09 21:16:54 +02:00
Tobias Geerinckx-Rice
05de4c346d
gnu: man-pages: Update to 5.01. 
* gnu/packages/man.scm (man-pages): Update to 5.01.
 2019-05-09 21:16:53 +02:00
Tobias Geerinckx-Rice
34dce89a0c
gnu: emacs-sml-mode: Update to 6.9. 
* gnu/packages/emacs-xyz.scm (emacs-sml-mode): Update to 6.9.
 2019-05-09 21:16:53 +02:00
Tobias Geerinckx-Rice
b03a4ed465
gnu: cdemu-client: Update to 3.2.1. 
* gnu/packages/cdrom.scm (cdemu-client): Update to 3.2.1.
 2019-05-09 21:13:29 +02:00
Tobias Geerinckx-Rice
97dbf75a56
gnu: cdemu-daemon: Update to 3.2.2. 
* gnu/packages/cdrom.scm (cdemu-daemon): Update to 3.2.2.
 2019-05-09 21:13:28 +02:00
Tobias Geerinckx-Rice
d201571754
gnu: libmirage: Update to 3.2.2. 
* gnu/packages/cdrom.scm (libmirage): Update to 3.2.2.
 2019-05-09 21:13:28 +02:00
Tobias Geerinckx-Rice
819b3b8201
gnu: vhba-module: Update to 20190410. 
* gnu/packages/linux.scm (vhba-module): Update to 20190410.
 2019-05-09 21:13:28 +02:00
Tobias Geerinckx-Rice
38878020b0
gnu: cloc: Update to 1.82. 
* gnu/packages/code.scm (cloc): Update to 1.82.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
 2019-05-09 21:13:28 +02:00
Marius Bakke
6c2180f5d0
services: dhcp-client: Ignore interfaces that are not ARP capable. 
* gnu/services/networking.scm (dhcp-client-service-type): Filter interfaces
that do not support the ARP protocol.
 2019-05-09 20:00:22 +02:00
Marius Bakke
5f5499d684
syscalls: Add 'arp-network-interface?'. 
* guix/build/syscalls.scm (IFF_NOARP): New variable.
(arp-network-interface?): New public procedure.
 2019-05-09 20:00:21 +02:00
Ludovic Courtès
a0dc97a517
pull: Display 'hash guix' hint when the new and old 'guix' are different. 
Fixes <https://bugs.gnu.org/35601>.
Reported by Diego Nicola Barbato <dnbarbato@posteo.de>.

Previously we were calling (which "guix") after the new profile had been
built and symlinked, so in most cases the hint would not be triggered,
even though it should have been triggered.

* guix/scripts/pull.scm (build-and-install)[guix-command]: New variable.
Compare PROFILE/bin/guix against GUIX-COMMAND.
 2019-05-09 17:42:31 +02:00
Ludovic Courtès
8deb65c378
tests: Ensure 'unshare' works before relying on it. 
Fixes <https://bugs.gnu.org/35642>.
Reported by Josh Holland <josh@inv.alid.pw>.

* tests/guix-pack-relocatable.sh: Before invoking 'unshare' at the
bottom, add "if unshare -r true" condition.
* tests/guix-pack.sh: Likewise.
 2019-05-09 17:42:31 +02:00
Marius Bakke
18160c3408
gnu: Use mirror://kernel.org in source URIs. 
* gnu/packages/linux.scm (bridge-utils, cpufrequtils, sbc)[source](uri): Use
"mirror://kernel.org" instead of www.kernel.org directly.
 2019-05-09 14:06:07 +02:00
Marius Bakke
aeb1ed1abc
gnu: wpa_supplicant: Update to 2.8 [security fixes]. 
This release fixes CVE-2019-9494, CVE-2019-9495, CVE-2019-9496, CVE-2019-9497,
CVE-2019-9498, CVE-2019-9499, and CVE-2019-11555.

* gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.8.
[source](snippet): New field.  Disable D-Bus.
[arguments]: Change CONFIG_TLS to use OpenSSL rather than GnuTLS.  This is
required by many of the new default build-time settings.
[inputs]: Remove GNUTLS and LIBGCRYPT.  Add OPENSSL.
(wpa-supplicant)[arguments]: Remove obsolete CONFIG_CTRL_IFACE_DBUS=y.
 2019-05-09 13:43:03 +02:00
Marius Bakke
3fde051bfd
gnu: libtorrent-rasterbar: Update to 1.1.13. 
* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.1.13.
 2019-05-09 13:43:03 +02:00
Marius Bakke
3a32be71eb
gnu: leveldb: Update to 1.22. 
* gnu/packages/databases.scm (leveldb): Update to 1.22.
 2019-05-09 13:43:03 +02:00
Josh Holland
4506018e28
gnu: Mercurial: Update to 5.0 
* gnu/packages/version-control.scm (mercurial): Update to 5.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-09 12:11:37 +02:00
Ludovic Courtès
e6b1a2248f
services: Log-in services now require "pam_loginuid". 
Fixes <https://bugs.gnu.org/35553>.
Reported by Bruno Haible <bruno@clisp.org>.

* gnu/services/base.scm (login-pam-service): Pass #:login-uid? #t to
'unix-pam-service'.
* gnu/services/ssh.scm (lsh-pam-services, openssh-pam-services):
Likewise.
* gnu/services/xorg.scm (slim-pam-service): Likewise.
(gdm-pam-service): Likewise for "gdm-autologin" and "gdm-password".
* gnu/tests/base.scm (run-basic-test)["getlogin on tty1"]: New test.
* gnu/tests/ssh.scm (run-ssh-test): Add #:test-getlogin? parameter.
["getlogin"]: New test.
(%test-dropbear): Pass #:test-getlogin? #f.
 2019-05-09 12:11:36 +02:00
Ludovic Courtès
af55ca481d
system: pam: Add #:login-uid? parameter to 'unix-pam-service'. 
* gnu/system/pam.scm (unix-pam-service): Add #:login-uid? parameter.  In
then 'session' field, add "pam_loginuid.so" as required when LOGIN-UID?
is true.
 2019-05-09 12:11:36 +02:00
Ludovic Courtès
56038bac60
gnu: Add hostapd. 
* gnu/packages/admin.scm (hostapd): New variable.
 2019-05-09 12:11:36 +02:00
Ludovic Courtès
6ad799d7c5
services: slim: Provide the 'xorg-server' Shepherd service. 
This is a followup to 61569171d0.

* gnu/services/xorg.scm (slim-shepherd-service): Add 'xorg-server' to
'provision' when VT is "vt7".
 2019-05-09 12:11:36 +02:00
Ludovic Courtès
cae0725b80
bootloader: grub: Remove unneeded 'terminal_output'. 
Fixes <https://bugs.gnu.org/35585>.
Reported by Florian Pelz <pelzflorian@pelzflorian.de>.

This statement was added in 8d058e7b1b but
turned out to be unnecessary.

* gnu/bootloader/grub.scm (grub-configuration-file): Remove
'terminal_output' statement.
 2019-05-09 12:11:36 +02:00
Ludovic Courtès
fb98e430d4
installer: Add missing 'G_' call. 
* gnu/installer/newt/user.scm (run-user-page): Add 'G_' call for "User
creation".
 2019-05-09 12:11:36 +02:00
Josh Holland
4ac8dd43f0
doc: Fix typo. 
* doc/guix.texi (cargo-build-system): Correct Carto.toml.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2019-05-09 12:54:18 +05:30
Chris Marusich
387e6b9e34
ui: Make package outputs searchable. 
* guix/ui.scm (relevance): Allow the "field" procedure of a metric to
return a list, and handle that case appropriately.  Update docstring.
(%package-metrics): Add a metric for package outputs.
* guix/scripts/package.scm (find-packages-by-description): Update
docstring.
* tests/guix-package.sh: Add a test case to verify that package outputs are
included in search results.

Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2019-05-09 00:10:34 -07:00
Maxim Cournoyer
063edf928a
gnu: Add python-pylibmc. 
* gnu/packages/databases.scm (python-pylibmc, python2-pylibmc): New variables.
 2019-05-09 00:22:38 -04:00
Maxim Cournoyer
da6026792b
gnu: Add libmemcached. 
* gnu/packages/databases.scm (libmemcached): New variable.
 2019-05-09 00:22:37 -04:00
Maxim Cournoyer
4ac69ea10f
Add (guix bzr-download). 
* guix/bzr-download.scm, guix/build/bzr.scm,
etc/snippets/scheme-mode/guix-bzr-reference: New files.
* Makefile.am (MODULES): Add them.
* etc/snippets/scheme-mode/guix-origin: Add "bzr-fetch" to the origin choices.
 2019-05-09 00:22:37 -04:00
Mark H Weaver
c526b3176f
gnu: linux-libre: Update to 5.0.14. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.14.
(%linux-libre-hash): Update hash.
 2019-05-08 22:51:27 -04:00
Mark H Weaver
013130cf0b
gnu: linux-libre@4.19: Update to 4.19.41. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.41.
(%linux-libre-4.19-hash): Update hash.
 2019-05-08 22:19:29 -04:00