Commit graph

62152 commits

Author SHA1 Message Date
Ricardo Wurmus
1465873c6c
gnu: r-linnorm: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.12.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:52 +02:00
Ricardo Wurmus
ae1c51a1c1
gnu: r-lumi: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-lumi): Update to 2.40.0.
2020-06-13 01:19:52 +02:00
Ricardo Wurmus
5f25d5f80d
gnu: r-methylumi: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-methylumi): Update to 2.34.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:52 +02:00
Ricardo Wurmus
83e6ffdac1
gnu: r-minfi: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-minfi): Update to 1.34.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
e3fbcb28a4
gnu: r-bumphunter: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.30.0.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
debaa0f3ba
gnu: r-siggenes: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.62.0.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
d784a4784f
gnu: r-illuminaio: Update to 0.30.0.
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.30.0.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
159e427c9f
gnu: r-geoquery: Update to 2.56.0.
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.56.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
3fc1e03949
gnu: r-scone: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-scone): Update to 1.12.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
ce9e19bc9b
gnu: r-scdd: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-scdd): Update to 1.12.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
22c084ba9d
gnu: r-noiseq: Update to 2.31.0.
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.31.0.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
d1f3c37134
gnu: r-monocle: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.16.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
97cba97aa1
gnu: r-mast: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-mast): Update to 1.14.0.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
ee1e8fee89
gnu: r-icobra: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.16.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
359a084aa3
gnu: r-ihw: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.16.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
0653b8b082
gnu: r-lpsymphony: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.16.0.
[inputs]: Remove gfortran.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:51 +02:00
Ricardo Wurmus
6e2dc9e385
gnu: r-karyoploter: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.14.0.
[propagated-inputs]: Add r-genomicfeatures.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
1e37caca52
gnu: r-ebseq: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.28.0.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
6a7cfd5f1f
gnu: r-dnacopy: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.62.0.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
866939b76d
gnu: r-copynumber: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.28.0.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
9697afb10e
gnu: r-chipexoqual: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.12.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
784d1670b7
gnu: r-savr: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-savr): Update to 1.26.0.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
265b645075
gnu: r-destiny: Update to 3.2.0.
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.2.0.
[propagated-inputs]: Add r-nbconvertr.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
a8351d467c
gnu: r-biocsingular: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.4.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
f5864c11a4
gnu: r-biocneighbors: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.6.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
ae0fcaa6fd
gnu: r-ruvseq: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.22.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
14f40ae830
gnu: r-dnabarcodes: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.18.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
437bc4dda9
gnu: r-inspect: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.18.0.
[propagated-inputs]: Add r-rtracklayer.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
46a973bc24
gnu: r-plgem: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-plgem): Update to 1.60.0.
2020-06-13 01:19:50 +02:00
Ricardo Wurmus
ee73dea61b
gnu: r-rots: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.16.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
a6251d6e8b
gnu: r-glimma: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.16.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
7fbd97745b
gnu: r-goseq: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.40.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
c7be592fb4
gnu: r-ctc: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.62.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
76dd036e16
gnu: r-genomicinteractions: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.22.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
861a903f14
gnu: r-interactionset: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.16.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
6b78a91b75
gnu: r-riboseqr: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.22.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
7aae05a953
gnu: r-riboprofiling: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.18.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
ef1d3231c3
gnu: r-chipcomp: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.18.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
9834c36724
gnu: r-bayseq: Update to 2.22.0.
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.22.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
f4ef564595
gnu: r-qdnaseq: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.24.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
de4a352e8a
gnu: r-cghcall: Update to 2.50.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.50.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
bd93ec4cf0
gnu: r-cghbase: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.48.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
49d589e530
gnu: r-marray: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.66.0.
2020-06-13 01:19:49 +02:00
Ricardo Wurmus
dc24de46ad
gnu: r-chippeakanno: Update to 3.22.2.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.22.2.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:48 +02:00
Ricardo Wurmus
7d37c6d914
gnu: r-graph: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.66.0.
2020-06-13 01:19:48 +02:00
Ricardo Wurmus
8cadf253c3
gnu: r-multtest: Update to 2.44.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.44.0.
2020-06-13 01:19:48 +02:00
Ricardo Wurmus
b47b649ae5
gnu: r-diffbind: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.16.0.
2020-06-13 01:19:48 +02:00
Ricardo Wurmus
f9a247590e
gnu: r-qvalue: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.20.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:48 +02:00
Ricardo Wurmus
ace82f805f
gnu: r-oligo: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.52.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:48 +02:00
Ricardo Wurmus
b628842f7e
gnu: r-oligoclasses: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.50.0.
2020-06-13 01:19:48 +02:00