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Author SHA1 Message Date
Ricardo Wurmus
b76b47ebe4
gnu: Add r-genetclassifier. 
* gnu/packages/bioconductor.scm (r-genetclassifier): New variable.
 2021-09-07 12:01:25 +02:00
Ricardo Wurmus
e43c6d2e4a
gnu: Add r-minet. 
* gnu/packages/bioconductor.scm (r-minet): New variable.
 2021-09-07 12:01:16 +02:00
Ricardo Wurmus
5143f3852d
gnu: Add r-biobtreer. 
* gnu/packages/bioconductor.scm (r-biobtreer): New variable.
 2021-09-07 12:01:10 +02:00
Ricardo Wurmus
a59aee1330
gnu: Add r-bgeedb. 
* gnu/packages/bioconductor.scm (r-bgeedb): New variable.
 2021-09-07 12:01:03 +02:00
Ricardo Wurmus
26da032d5b
gnu: Add r-org-bt-eg-db. 
* gnu/packages/bioconductor.scm (r-org-bt-eg-db): New variable.
 2021-09-07 12:00:53 +02:00
Ricardo Wurmus
e658cde524
gnu: Add r-chk. 
* gnu/packages/cran.scm (r-chk): New variable.
 2021-09-07 12:00:46 +02:00
Ricardo Wurmus
af81591375
gnu: Add r-bgeecall. 
* gnu/packages/bioconductor.scm (r-bgeecall): New variable.
 2021-09-07 11:44:33 +02:00
Ricardo Wurmus
ec997158db
gnu: Add r-rslurm. 
* gnu/packages/cran.scm (r-rslurm): New variable.
 2021-09-07 11:44:33 +02:00
Ricardo Wurmus
62381dce86
gnu: Add r-beclear. 
* gnu/packages/bioconductor.scm (r-beclear): New variable.
 2021-09-07 11:44:33 +02:00
Nicolas Goaziou
4867738c7f
gnu: emacs-dap-mode: Update to 0.7. 
* gnu/packages/emacs-xyz.scm (emacs-dap-mode): Update to 0.7.
 2021-09-07 09:44:09 +02:00
Nicolas Goaziou
d905c34766
gnu: emacs-lsp-mode: Move all client libraries at top-level. 
* gnu/packages/emacs-xyz.scm (emacs-lsp-mode)[arguments]<#:phases>: Move all
client libraries at top-level.  <#:emacs>: Use full Emacs for libxml support.
 2021-09-07 09:42:45 +02:00
Nicolas Goaziou
4610f44efd
gnu: emacs-lsp-mode: Add clients. 
* gnu/packages/emacs-xyz.scm (emacs-lsp-mode)[arguments]: Also install
LSP-mode clients.
 2021-09-07 09:28:45 +02:00
Nicolas Goaziou
8b81c6861f
gnu: emacs-lsp-ivy: Update to 0.5. 
* gnu/packages/emacs-xyz.scm (emacs-lsp-ivy): Update to 0.5.
 2021-09-07 09:07:37 +02:00
Nicolas Goaziou
5e5516f833
gnu: emacs-lsp-ui: Update to 8.0.0. 
* gnu/packages/emacs-xyz.scm (emacs-lsp-ui): Update to 8.0.0.
 2021-09-07 09:05:31 +02:00
Nicolas Goaziou
8ffbf2567b
gnu: emacs-lsp-treemacs: Update to 0.4. 
* gnu/packages/emacs-xyz.scm (emacs-lsp-treemacs): Update to 0.4.
 2021-09-07 08:35:38 +02:00
Nicolas Goaziou
9cf8786aed
gnu: emacs-lsp-mode: Update to 8.0.0. 
* gnu/packages/emacs-xyz.scm (emacs-lsp-mode): Update to 8.0.0.
 2021-09-07 08:34:03 +02:00
Leo Famulari
8b2b027df9
gnu: Add linux-libre 5.14.1. 
* gnu/packages/linux.scm (linux-libre-5.14-version, deblob-scripts-5.14,
linux-libre-5.14-pristine-source, linux-libre-5.14-source,
linux-libre-headers-5.14, linux-libre-5.14): New variables.
* gnu/packages/aux-files/linux-libre/5.14-arm.conf,
gnu/packages/aux-files/linux-libre/5.14-arm64.conf,
gnu/packages/aux-files/linux-libre/5.14-i686.conf,
gnu/packages/aux-files/linux-libre/5.14-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Add them.
 2021-09-06 22:27:43 -04:00
Leo Famulari
36e186d333
gnu: linux-libre 4.4: Update to 4.4.283. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.283.
(linux-libre-4.4-gnu-revision): Update to gnu1.
(linux-libre-4.4-pristine-source, deblob-scripts-4.4): Update hash.
 2021-09-06 22:16:33 -04:00
Leo Famulari
def683d3dc
gnu: linux-libre 4.9: Update to 4.9.282. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.282.
(linux-libre-4.9-gnu-revision): Update to gnu1.
(linux-libre-4.9-pristine-source, deblob-scripts-4.9): Update hashes.
 2021-09-06 22:16:33 -04:00
Leo Famulari
4f30ae4284
gnu: linux-libre 4.14: Update to 4.14.246. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.246.
(linux-libre-4.14-gnu-revision): Update to gnu1.
(linux-libre-4.14-pristine-source, deblob-scripts-4.14): Update hashes.
 2021-09-06 22:16:33 -04:00
Leo Famulari
adb520b1fb
gnu: linux-libre 4.19: Update to 4.19.206. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.206.
(linux-libre-4.19-gnu-revision): Update to gnu1.
(linux-libre-4.19-pristine-source, deblob-scripts): Update hashes.
 2021-09-06 22:16:33 -04:00
Leo Famulari
ec51a33707
gnu: linux-libre 5.4: Update to 5.4.144. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.144.
(linux-libre-5.4-gnu-revision): Update to gnu1.
(linux-libre-5.4-pristine-source, deblob-scripts-5.4): Update hashes.
 2021-09-06 22:16:32 -04:00
Leo Famulari
cb3b77aaa5
gnu: linux-libre 5.10: Update to 5.10.62. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.62.
(linux-libre-5.10-gnu-revision): Update to gnu1.
(linux-libre-5.10-pristine-source, deblob-scripts-5.10): Update hashes.
 2021-09-06 22:16:32 -04:00
Leo Famulari
3cf518b5eb
gnu: linux-libre: Update to 5.13.14. 
* gnu/packages/linux.scm (linux-libre-5.13-version): Update to 5.13.14.
(linux-libre-5.13-gnu-revision): Update to gnu1.
(linux-libre-5.13-pristine-source, deblob-scripts-5.13): Update hashes.
 2021-09-06 22:16:32 -04:00
Leo Famulari
a185a02f54
gnu: linux-libre: Parameterize the revision of the deblob scripts. 
For more information about this:
https://lists.gnu.org/archive/html/guix-devel/2021-09/msg00054.html

* gnu/packages/linux.scm (linux-libre-5.13-gnu-revision,
linux-libre-5.10-gnu-revision, linux-libre-5.4-gnu-revision,
linux-libre-4.19-gnu-revision, linux-libre-4.14-gnu-revision,
linux-libre-4.9-gnu-revision, linux-libre-4.4-gnu-revision,
linux-libre-gnu-revision, linux-libre-lts-gnu-revision): New variables.
(linux-libre-deblob-scripts, linux-libre-urls, make-linux-libre-headers,
make-linux-libre-headers*, make-linux-libre, make-linux-libre*): Add a
gnu-revision argument.
(deblob-scripts-5.13, deblob-scripts-5.10, deblob-scripts-5.4,
deblob-scripts-4.19, deblob-scripts-4.14, deblob-scripts-4.9,
deblob-scripts-4.4): Set the gnu-revision.
(linux-libre-headers-5.13, linux-libre-headers-5.10, linux-libre-headers-5.4,
linux-libre-headers-4.19, linux-libre-headers-4.14, linux-libre-headers-4.9,
linux-libre-headers-4.4): Likewise.
(linux-libre-5.10, linux-libre-5.4, linux-libre-4.19, linux-libre-4.14,
linux-libre-4.9, linux-libre-4.4, linux-libre-arm-generic,
linux-libre-arm-generic-5.10, linux-libre-arm-generic-5.4,
linux-libre-arm-generic-4.19, linux-libre-arm-generic-4.14,
linux-libre-arm-omap2plus, linux-libre-arm-omap2plus-4.19,
linux-libre-arm-omap2plus-4.14, linux-libre-arm64-generic,
linux-libre-arm64-generic-5.10, linux-libre-arm64-generic-5.4,
linux-libre-riscv64-generic, linux-libre-mips64el-fuloong2e,
linux-libre-with-bpf): Likewise.
(linux-libre-headers-5.4.20): Set the gnu-revision, taking care not to alter the
derivation.
 2021-09-06 22:16:32 -04:00
Xinglu Chen
49922efb11
gnu: ocaml-ppxlib: Update to 0.23.0. 
* gnu/packages/ocaml.scm (ocaml-ppxlib): Update to 0.23.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-09-06 23:27:40 +02:00
Xinglu Chen
550f4aa682
gnu: ocaml-ppx-variants-conv: Patch for building with ocaml-ppxlib. 
The patch will make it build when building it with ocaml-ppxlib@0.23.0.

* gnu/packages/patches/ocaml-ppx-variants-ppxlib-api-change.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/ocaml.scm (ocaml-ppx-variants-conv): Apply the patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-09-06 23:27:40 +02:00
Xinglu Chen
b60a7f049c
gnu: ocamlformat: Update to 0.19.0. 
* gnu/packages/ocaml.scm (ocamlformat): Update to 0.19.0.
[propagated-inputs]: Add ocaml-odoc-parser.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-09-06 23:27:40 +02:00
Xinglu Chen
c80e71a586
gnu: ocaml-ppx-optcomp: Update to 0.14.3. 
* gnu/packages/ocaml.scm (ocaml-ppx-optcomp): Update to 0.14.3.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-09-06 23:27:40 +02:00
Ludovic Courtès
5fc9d71bac
gnu: ocaml-markup@0.8.0: Use 'ocaml-ounit', not 'ocaml-ounit2'. 
* gnu/packages/ocaml.scm (ocaml-markup0.8.0)[native-inputs]: New field.
 2021-09-06 23:27:40 +02:00
Ludovic Courtès
153fd217b6
swh: Add 'lookup-snapshot-branch'. 
* guix/swh.scm (<snapshot>)[id]: New field.
(snapshot-url, lookup-snapshot-branch): New procedures.
 2021-09-06 22:58:12 +02:00
Ludovic Courtès
63ed618e33
swh: <revisions> accept null 'date' fields. 
* guix/swh.scm (maybe-null): New procedure.
(<revision>)[date]: Use it.
 2021-09-06 22:58:12 +02:00
Ludovic Courtès
b452c3b37a
swh: Export <snapshot> accessors. 
* guix/swh.scm: Export <snapshot> accessors.
 2021-09-06 22:58:12 +02:00
Nicolas Goaziou
b0ea618fbe
gnu: emacs-xref: Update to 1.2.2. 
* gnu/packages/emacs-xyz.scm (emacs-xref): Update to 1.2.2.
 2021-09-06 18:20:36 +02:00
Ricardo Wurmus
816d52ba93
gnu: Add r-megadepth. 
* gnu/packages/bioconductor.scm (r-megadepth): New variable.
 2021-09-06 14:48:24 +02:00
Ricardo Wurmus
c82b723bf8
gnu: Add megadepth. 
* gnu/packages/bioinformatics.scm (megadepth): New variable.
 2021-09-06 14:48:24 +02:00
Ricardo Wurmus
f9e5d04fc2
gnu: Add libdeflate. 
* gnu/packages/compression.scm (libdeflate): New variable.
 2021-09-06 14:48:23 +02:00
Ricardo Wurmus
9e836ca8fc
gnu: Add r-cmdfun. 
* gnu/packages/cran.scm (r-cmdfun): New variable.
 2021-09-06 14:48:23 +02:00
Liliana Marie Prikler
7158f8e4e9
Update mailmap. 
* .mailmap: Add entry for Liliana Marie Prikler.
 2021-09-06 12:15:57 +02:00
Liliana Marie Prikler
dad2dcbf0f
.guix-authorizations: Rename leoprikler to lilyp. 
* .guix-authorizations: Rename leoprikler to lilyp.
 2021-09-06 12:15:56 +02:00
Brice Waegeneire
06d34c703b
gnu: alacritty: Update to 0.9.0. 
* gnu/packages/terminals.scm (alacritty): Update to 0.9.0.
  [arguments]<cargo-inputs>: Update rust-alacritty-terminal to 0.15,
  rust-crossfont to 0.3, rust-dirs to 3.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:25:48 +02:00
Brice Waegeneire
ff1a5d5022
gnu: Add rust-crossfont-0.3. 
* gnu/packages/crates-io.scm (rust-crossfont-0.3): New variable.
(rust-crossfont-0.2): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:23:49 +02:00
Brice Waegeneire
efca5516d1
gnu: rust-alacritty-terminal: Update to 0.15.0. 
* gnu/packages/crates-io.scm (rust-alacritty-terminal-0.15): Renamed
  from rust-alacritty-terminal-0.13.  Update to 0.15.0.
  [arguments]<cargo-inputs>: Update rust-base64 to 0.13.  Update
  rust-mio-anonymous-pipes to 0.2.  Update rust-nix to 0.22.
 2021-09-06 11:22:11 +02:00
Brice Waegeneire
54ce83b7f2
gnu: Add rust-mio-anonymous-pipes-0.2. 
* gnu/packages/crates-io.scm (rust-mio-anonymous-pipes-0.2): New variable.
(rust-mio-anonymous-pipes-0.1): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:21:30 +02:00
Robby Zambito
aced5d2608
gnu: Add waypipe. 
* gnu/packages/freedesktop.scm (waypipe): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:15:00 +02:00
Xinglu Chen
32d80c2238
gnu: emacs-ebdb: Update to 0.8.4. 
* gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.8.4.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:10:37 +02:00
Xinglu Chen
6940a57abd
gnu: xwallpaper: Update to 0.7.3. 
* gnu/packages/xdisorg.scm (xwallpaper): Update to 0.7.3.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:09:54 +02:00
Xinglu Chen
d5753f1d19
gnu: emacs-xref: Update to 1.2.1. 
* gnu/packages/emacs-xyz.scm (emacs-xref): Update to 1.2.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:09:10 +02:00
Xinglu Chen
e76ed759a0
gnu: feh: Update to 3.7.1. 
* gnu/packages/image-viewers.scm (feh): Update to 3.7.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-09-06 11:05:20 +02:00
iKaSeRo
53ccbc1755
gnu: Add mlterm. 
* gnu/packages/terminals.scm (mlterm): New variable.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-09-06 00:16:51 +02:00