zimoun
64f9fb308f
gnu: r-bigmelon: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.16.0.
2020-12-09 12:12:48 +01:00
zimoun
9f6e2bfe1f
gnu: r-watermelon: Update to 1.34.0.
...
* gnu/packages/bioconductor.scm (r-watermelon): Update to 1.34.0.
2020-12-09 12:12:47 +01:00
zimoun
8db36c1f68
gnu: r-yarn: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-yarn): Update to 1.16.0.
2020-12-09 12:12:47 +01:00
zimoun
adf6edc750
gnu: r-quantro: Update to 1.24.0.
...
* gnu/packages/bioconductor.scm (r-quantro): Update to 1.24.0.
2020-12-09 12:12:47 +01:00
zimoun
4eeaa159d2
gnu: r-lumi: Update to 2.42.0.
...
* gnu/packages/bioconductor.scm (r-lumi): Update to 2.42.0.
2020-12-09 12:12:47 +01:00
zimoun
0b7dd44706
gnu: r-methylumi: Update to 2.36.0.
...
* gnu/packages/bioconductor.scm (r-methylumi): Update to 2.36.0.
2020-12-09 12:12:47 +01:00
zimoun
e5a4198bc3
gnu: r-minfi: Update to 1.36.0.
...
* gnu/packages/bioconductor.scm (r-minfi): Update to 1.36.0.
2020-12-09 12:12:47 +01:00
zimoun
45dfb75166
gnu: Add r-catalyst.
...
* gnu/packages/bioconductor.scm (r-catalyst): New variable.
2020-12-09 12:12:47 +01:00
zimoun
43bf50ecae
gnu: r-ggcyto: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.18.0.
2020-12-09 12:12:47 +01:00
zimoun
b856a48768
gnu: r-scdd: Update to 1.14.0.
...
* gnu/packages/bioconductor.scm (r-scdd): Update to 1.14.0.
2020-12-09 12:12:47 +01:00
zimoun
3f04b8167b
gnu: r-chipcomp: Update to 1.20.0.
...
* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.20.0.
2020-12-09 12:12:47 +01:00
zimoun
1174317e03
gnu: r-pcatools: Update to 2.2.0.
...
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.2.0.
2020-12-09 12:12:47 +01:00
zimoun
970984237a
gnu: r-biocviews: Update to 1.58.1.
...
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.58.1.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09 12:12:47 +01:00
zimoun
b03c955c6f
gnu: r-scran: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-scran): Update to 1.18.0.
[propagated-inputs]: Add r-bluster, r-scuttle. Remove r-iranges.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09 12:12:47 +01:00
zimoun
d4b5d18684
gnu: r-scater: Update to 1.18.3.
...
* gnu/packages/bioconductor.scm (r-scater): Update to 1.18.3.
[propagated-inputs]: Add r-gridextra, r-scutlle. Remove r-beachmat, r-rcpp.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09 12:12:46 +01:00
Ricardo Wurmus
0e60dda0ae
gnu: Add r-scuttle.
...
* gnu/packages/bioconductor.scm (r-scuttle): New variable.
2020-12-09 12:12:46 +01:00
zimoun
10c87ecf77
gnu: r-delayedmatrixstats: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.12.0.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>.
2020-12-09 12:12:46 +01:00
zimoun
53affb349a
gnu: r-rhdf5: Update to 2.34.0.
...
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.34.0.
[propagated-inputs]: Add r-rhdf5filters.
[arguments]: Avoid to have a plain directory on the list of libraries to
link.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09 12:12:46 +01:00
Ricardo Wurmus
86fcceeae1
gnu: Add r-rhdf5filters.
...
* gnu/packages/bioinformatics.scm (r-rhdf5filters): New variable.
2020-12-09 12:12:46 +01:00
zimoun
4ef898d449
gnu: r-singlecellexperiment: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.12.0.
2020-12-09 12:12:46 +01:00
zimoun
d0db04fcaf
gnu: r-yapsa: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.16.0.
2020-12-09 12:12:46 +01:00
zimoun
798ec28916
gnu: r-biocsingular: Update to 1.6.0.
...
* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.6.0.
2020-12-09 12:12:46 +01:00
zimoun
dd9341ffa3
gnu: r-genomicinteractions: Update to 1.24.0.
...
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.24.0.
2020-12-09 12:12:46 +01:00
zimoun
35dae95110
gnu: r-interactionset: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.18.0.
2020-12-09 12:12:46 +01:00
zimoun
60ad3c7b3b
gnu: r-genomationdata: Update to 1.22.0.
...
* gnu/packages/bioinformatics.scm (r-genomationdata): Update to 1.22.0.
2020-12-09 12:12:46 +01:00
Ricardo Wurmus
5e719988f2
gnu: Add r-sparsematrixstats.
...
* gnu/packages/bioconductor.scm (r-sparsematrixstats): New variable.
2020-12-09 12:12:46 +01:00
Roel Janssen
a23310ffc2
gnu: Add r-bluster.
...
* gnu/packages/bioconductor.scm (r-bluster): New variable.
2020-12-09 12:12:45 +01:00
Roel Janssen
aca4ebe40a
gnu: r-annaffy: Update to 1.62.0.
...
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.62.0.
2020-12-09 12:12:45 +01:00
zimoun
e707820442
gnu: r-sushi: Update to 1.28.0.
...
* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.28.0.
2020-12-09 12:12:45 +01:00
zimoun
83129edfb7
gnu: r-gwascat: Update to 2.22.0.
...
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.22.0.
[propagated-inputs]: Add r-biocfilecache, r-readr, r-snpstats, and
r-variantannotation; remove r-biocgenerics, r-ggplot2, r-rsamtools, and
r-rtracklayer.
2020-12-09 12:12:45 +01:00
zimoun
717e53fdc0
gnu: r-gviz: Update to 1.34.0.
...
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.34.0.
2020-12-09 12:12:45 +01:00
zimoun
0a8d08e887
gnu: r-ldblock: Update to 1.20.0.
...
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.20.0.
2020-12-09 12:12:45 +01:00
zimoun
494010ad3e
gnu: r-erma: Update to 1.6.0.
...
* gnu/packages/bioinformatics.scm (r-erma): Update to 1.6.0.
2020-12-09 12:12:45 +01:00
zimoun
6e338901bf
gnu: r-snpstats: Update to 1.40.0.
...
* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.40.0.
2020-12-09 12:12:45 +01:00
zimoun
74a11b21be
gnu: r-ggbio: Update to 1.38.0.
...
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.38.0.
2020-12-09 12:12:45 +01:00
zimoun
3c6eecdeed
gnu: r-biovizbase: Update to 1.38.0.
...
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.38.0.
2020-12-09 12:12:45 +01:00
zimoun
6e182c237a
gnu: r-organismdbi: Update to 1.32.0.
...
* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.32.0.
2020-12-09 12:12:44 +01:00
zimoun
06fe3b7a53
gnu: r-ensembldb: Update to 2.14.0.
...
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.14.0.
2020-12-09 12:12:44 +01:00
zimoun
8962a13afe
gnu: r-dirichletmultinomial: Update to 1.32.0.
...
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.32.0.
2020-12-09 12:12:44 +01:00
Roel Janssen
4ef1e375b4
gnu: r-complexheatmap: Update to 2.6.2.
...
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.6.2;
[propagated-inputs]: Add r-cairo, r-digest, r-iranges, r-matrixstats, and
r-s4vectors.
2020-12-09 12:12:44 +01:00
zimoun
0fde2f9ad2
gnu: r-genomicfiles: Update to 1.26.0.
...
* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.26.0.
[propagated-inputs]: Add r-matrixgenerics.
2020-12-09 12:12:44 +01:00
zimoun
78cadd0fef
gnu: r-gage: Update to 2.40.0.
...
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.40.0.
2020-12-09 12:12:44 +01:00
zimoun
143437c623
gnu: r-keggrest: Update to 1.30.0.
...
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.30.0.
2020-12-09 12:12:44 +01:00
zimoun
b6dd0722c8
gnu: r-fastseg: Update to 1.36.0.
...
* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.36.0.
2020-12-09 12:12:44 +01:00
zimoun
a9dc755e67
gnu: r-annotationhub: Update to 2.22.0.
...
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.22.0.
2020-12-09 12:12:43 +01:00
zimoun
3becce3ff3
gnu: r-interactivedisplaybase: Update to 1.28.0.
...
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.28.0.
2020-12-09 12:12:43 +01:00
zimoun
8e55b9f502
gnu: r-edaseq: Update to 2.24.0.
...
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.24.0.
2020-12-09 12:12:43 +01:00
zimoun
8db8a683b9
gnu: r-aroma-light: Update to 3.20.0.
...
* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.20.0.
2020-12-09 12:12:43 +01:00
zimoun
971f3a377c
gnu: r-msnid: Update to 1.24.0.
...
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.24.0.
[propagated-inputs]: Add r-annotationdbi, r-annotationhub, r-biocgenerics,
r-biocstyle, r-biostrings, r-ggplot2, r-msmstests, r-purrr, r-rlang, r-runit,
r-stringr, r-tibble, and r-xtable.
2020-12-09 12:12:43 +01:00
zimoun
16f16b5e21
gnu: Add r-msmstests.
...
* gnu/packages/bioconductor.scm (r-msmstests): New variable.
2020-12-09 12:12:43 +01:00
