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Author SHA1 Message Date
Tobias Geerinckx-Rice
62cb0eae3e
gnu: libhx: Update to 4.8. 
* gnu/packages/c.scm (libhx): Update to 4.8.
 2022-12-11 01:00:01 +01:00
Tobias Geerinckx-Rice
885f18d750
gnu: libdeflate: Update to 1.15. 
* gnu/packages/compression.scm (libdeflate): Update to 1.15.
[build-system]: Use CMake.
[arguments]: Remove #:make-flags and all custom phases.
Add equivalent #:configure-flags and a custom 'check phase.
 2022-12-11 01:00:01 +01:00
Tobias Geerinckx-Rice
2ed751715f
gnu: python-aiounittest: Update to 1.4.2. 
* gnu/packages/check.scm (python-aiounittest): Update to 1.4.2.
 2022-12-11 01:00:01 +01:00
Tobias Geerinckx-Rice
816c7f4e84
gnu: doctest: Update to 2.4.9. 
* gnu/packages/check.scm (doctest): Update to 2.4.9.
 2022-12-11 01:00:01 +01:00
Tobias Geerinckx-Rice
039bef4ac8
gnu: ccache: Update to 4.7.4. 
* gnu/packages/ccache.scm (ccache): Update to 4.7.4.
 2022-12-11 01:00:00 +01:00
Tobias Geerinckx-Rice
aceb4e49d1
gnu: byacc: Update to 20221106. 
* gnu/packages/c.scm (byacc): Update to 20221106.
 2022-12-11 01:00:00 +01:00
Tobias Geerinckx-Rice
2b7b0cac71
gnu: fio: Update to 3.33. 
* gnu/packages/benchmark.scm (fio): Update to 3.33.
 2022-12-11 01:00:00 +01:00
Tobias Geerinckx-Rice
930b94809d
gnu: libltc: Update to 1.3.2. 
* gnu/packages/audio.scm (libltc): Update to 1.3.2.
 2022-12-11 01:00:00 +01:00
Tobias Geerinckx-Rice
b0913931e9
gnu: realmd: Update to 0.17.1. 
* gnu/packages/admin.scm (realmd): Update to 0.17.1.
 2022-12-11 01:00:00 +01:00
Jelle Licht
688028931f
gnu: emacs-pdf-tools: Update home page. 
* gnu/packages/emacs-xyz.scm (emacs-pdf-tools)[home-page]: Update.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-12-13 21:31:28 +01:00
Konrad Hinsen
a67461f0e1
gnu: emacs-hyperbole: Add missing files. 
* gnu/packages/emacs-xyz.scm (emacs-hyperbole)[arguments]: Add a new
INSTALL-DOC phase.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-12-13 21:24:09 +01:00
Nicolas Goaziou
7d570036f0
gnu: emacs-pg: Update to 0.20. 
* gnu/packages/emacs-xyz.scm (emacs-pg): Update to 0.20.
 2022-12-13 21:24:09 +01:00
Nicolas Goaziou
c922d935c3
gnu: emacs-fountain-mode: Update to 3.6.1. 
* gnu/packages/emacs-xyz.scm (emacs-fountain-mode): Update to 3.6.1.
 2022-12-13 21:24:08 +01:00
Nicolas Goaziou
98f7332aa8
gnu: emacs-debbugs: Update to 0.35. 
* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.35.
 2022-12-13 21:24:08 +01:00
Nicolas Goaziou
89795dec98
gnu: emacs-project: Update to 0.9.3. 
* gnu/packages/emacs-xyz.scm (emacs-project): Update to 0.9.3.
 2022-12-13 21:24:08 +01:00
dan
e4ab2ccb18
gnu: emacs-beancount: Update to 0.0.0-1.687775d. 
* gnu/packages/finance.scm (emacs-beancount): Update to 0.0.0-1.687775d.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-12-13 21:24:02 +01:00
Mark H Weaver
d83eef22b2
gnu: icecat: Update to 102.6.0-guix0-preview1 [security fixes]. 
Includes fixes for CVE-2022-46872, CVE-2022-46874, CVE-2022-46875,
CVE-2022-46878, CVE-2022-46880, CVE-2022-46881, and CVE-2022-46882.

* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
 2022-12-13 12:36:39 -05:00
Ricardo Wurmus
3d2b2f12e5
gnu: bedops: Update to 2.4.41. 
* gnu/packages/bioinformatics.scm (bedops): Update to 2.4.41.
[arguments]: Remove trailing #T from build phases; do not set BINDIR in
make-flags; set CC; replace 'install phase.
[native-inputs]: Add diffutils, perl, and which.
 2022-12-13 18:22:55 +01:00
Petr Hodina
22acc0b029
services: nix: Add more configuration fields. 
* gnu/services/nix.scm (<nix-configuration>)[build-directory]: New field.
(nix-service-etc, nix-shepherd-service): Take them into account.
* doc/guix.texi (Nix): Update it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-12-13 17:46:39 +01:00
Lars-Dominik Braun
bbcd06e56c
ui: Take package upstream name into account when searching. 
* guix/ui.scm (%package-metrics): Add PACKAGE-UPSTREAM-NAME*.
* tests/ui.scm ("package-relevance and upstream name"): New test.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-12-13 17:46:39 +01:00
Lars-Dominik Braun
052faadde7
packages: Add 'package-upstream-name*'. 
* guix/packages.scm (package-upstream-name*): New procedure.
* tests/packages.scm ("package-upstream-name*"): New test.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-12-13 17:46:39 +01:00
Ludovic Courtès
a2f0297af0
gnu: guile-gnutls: Add properties for the 'generic-git' updater. 
* gnu/packages/tls.scm (guile-gnutls)[properties]: New field.
 2022-12-13 17:46:39 +01:00
Ricardo Wurmus
23322c2de8
gnu: tophat: Remove trailing #T from build phases and snippet. 
* gnu/packages/bioinformatics.scm (tophat)[source]: Remove trailing #T from
snippet.
[arguments]: Remove trailing #T from build phases.
 2022-12-13 16:31:55 +01:00
Ricardo Wurmus
b339e181e1
gnu: python-bx-python: Update to 0.9.0. 
* gnu/packages/bioinformatics.scm (python-bx-python): Update to 0.9.0.
[build-system]: Use pyproject-build-system.
[arguments]: Add phase 'build-extensions and 'disable-cython-doctests.
[native-inputs]: Replace python-nose with python-pytest.
 2022-12-13 16:31:55 +01:00
Ricardo Wurmus
de30c74b63
gnu: bioawk: Use gexp. 
* gnu/packages/bioinformatics.scm (bioawk)[arguments]: Use gexp and simplify
'install phase.
 2022-12-13 16:31:55 +01:00
Ricardo Wurmus
057579495f
gnu: blasr-libcpp: Remove trailing #T from build phases. 
* gnu/packages/bioinformatics.scm (blasr-libcpp)[arguments]: Remove
trailing #T from build phases.
 2022-12-13 16:31:55 +01:00
Ricardo Wurmus
eaf5198a5e
gnu: pbbam: Drop input labels. 
* gnu/packages/bioinformatics.scm (pbbam)[native-inputs]: Drop labels.
 2022-12-13 16:31:55 +01:00
Ricardo Wurmus
8b2fdcb2c3
gnu: pbbam: Update to 2.1.0. 
* gnu/packages/bioinformatics.scm (pbbam): Update to 2.1.0.
 2022-12-13 16:31:55 +01:00
Ricardo Wurmus
684d046e6c
gnu: pbcopper: Update to 2.0.0. 
* gnu/packages/bioinformatics.scm (pbcopper): Update to 2.0.0.
 2022-12-13 16:31:55 +01:00
Ricardo Wurmus
53f65f7315
gnu: bedtools: Remove unnecessary quasiquotation. 
* gnu/packages/bioinformatics.scm (bedtools)[arguments]: Remove quasiquote.
[native-inputs]: Drop input label.
 2022-12-13 16:31:54 +01:00
Ricardo Wurmus
4f1a36bd7b
gnu: bamutils: Update to 1.0.15. 
* gnu/packages/bioinformatics.scm (bamutils): Update to 1.0.15.
[arguments]: Remove quasiquoting; remove USER_WARNINGS from make-flags.
[native-inputs]: Update libstatgen.
 2022-12-13 16:31:54 +01:00
Ricardo Wurmus
8cc22866c2
gnu: bamtools: Update to 2.5.2. 
* gnu/packages/bioinformatics.scm (bamtools): Update to 2.5.2.
[arguments]: Enable tests; remove extra phases.
[inputs]: Add jsoncpp.
[native-inputs]: Add pkg-config.
 2022-12-13 16:31:54 +01:00
Ricardo Wurmus
6d2afaf25b
gnu: aragorn: Update to 1.2.41. 
* gnu/packages/bioinformatics.scm (aragorn): Update to 1.2.41.
[source]: Fetch C source file from new location.
[arguments]: Drop trailing #T in build phases; use gexp.
[native-inputs]: Add origin for man page.
[home-page]: Update to new home page.
[license]: Update to GPLv3+.
 2022-12-13 16:31:54 +01:00
Maxim Cournoyer
93b0c1e35e
gnu: Add rpi-imager. 
* gnu/packages/raspberry-pi.scm (rpi-imager): New variable.
 2022-12-13 10:11:20 -05:00
jgart
87638cdd48
gnu: mercury: Update to 22.01.4. 
* gnu/packages/mercury.scm (mercury-minimal): Update to 22.01.4.
[arguments]: Remove obsolete and non-existent file from being patched.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-12-13 13:42:12 +00:00
jgart
1810d67ad4
gnu: mercury-minimal: Update to 22.01.4. 
* gnu/packages/mercury.scm (mercury-minimal): Update to 22.01.4.
[arguments]: Remove obsolete file path, update libatomic-ops, and update
libgc-8.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-12-13 13:42:12 +00:00
Sharlatan Hellseher
0682e7c2e3
gnu: python-h5netcdf: Update to 1.1.0. 
* gnu/packages/python-xyz.scm (python-h5netcdf): Update to 1.1.0.
[build-system]: Use pyproject-build-system, to simplify package.
[description]: Style content and add links to referenced projects.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-12-13 13:42:11 +00:00
Sharlatan Hellseher
1a0dcc2112
gnu: python-asdf-astropy: Update to 0.3.0. 
* gnu/packages/astronomy.scm (python-asdf-astropy): Update to 0.3.0.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-12-13 13:42:11 +00:00
EuAndreh
866eb7fffb
gnu: Add tmux-plugin-resurrect. 
* gnu/packages/tmux.scm (tmux-plugin-resurrect): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-12-13 13:42:11 +00:00
Paul A. Patience
36bd9121d6
gnu: Add rust-csv-index-0.1. 
* gnu/packages/crates-io.scm (rust-csv-index-0.1): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-12-13 13:42:11 +00:00
Martin Schmidt
34cf5e06a9
gnu: nheko: Support video calls. 
* gnu/packages/messaging.scm (nheko)[inputs]: Replace GST-PLUGINS-GOOD with
GST-PLUGINS-GOOD-QT to fix video calls.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-12-13 13:42:11 +00:00
Martin Schmidt
27efd3ed3c
gnu: Add gst-plugins-good-qt. 
* gnu/packages/gstreamer.scm (gst-plugins-good-qt): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-12-13 13:42:11 +00:00
Christopher Baines
2fb187ed7c
gnu: guix-data-service: Update to 0.0.1-36.7b69611. 
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-36.7b69611.
 2022-12-13 13:42:11 +00:00
Ricardo Wurmus
81841559f4
gnu: kaldi: Update to 0-1.be22248. 
* gnu/packages/machine-learning.scm (kaldi): Update to 0-1.be22248.
 2022-12-13 14:38:13 +01:00
Ricardo Wurmus
f764947dab
gnu: kaldi: Remove trailing #T from build phases. 
* gnu/packages/machine-learning.scm (kaldi)[arguments]: Remove trailing #T
from build phases.
 2022-12-13 14:38:12 +01:00
Ricardo Wurmus
c978ae3c6b
gnu: kaldi-gstreamer-server: Update to 0-3.f79e204. 
* gnu/packages/machine-learning.scm (kaldi-gstreamer-server): Update to
0-3.f79e204.
 2022-12-13 14:38:12 +01:00
Ricardo Wurmus
8466aceb13
gnu: kaldi-gstreamer-server: Drop input labels. 
* gnu/packages/machine-learning.scm (kaldi-gstreamer-server)[inputs]: Drop
package labels.
 2022-12-13 14:38:12 +01:00
Ricardo Wurmus
79cf84c7ab
gnu: kaldi-gstreamer-server: Remove trailing #T from build phases. 
* gnu/packages/machine-learning.scm (kaldi-gstreamer-server)[arguments]:
Remove trailing #T from build phases.
 2022-12-13 14:38:12 +01:00
Ricardo Wurmus
01f4617b99
gnu: gst-kaldi-nnet2-online: Update to 0-3.7888ae5. 
* gnu/packages/machine-learning.scm (gst-kaldi-nnet2-online): Update to
0-3.7888ae5.
[arguments]: Do to quote list; remove trailing #T from build phases; augment
CPLUS_INCLUDE_PATH instead of replacing it.
[inputs]: Replace openfst with openfst-1.7.3.
 2022-12-13 14:38:03 +01:00
Pierre Neidhardt
417604ec25
gnu: sbcl-alloy: Update to 20221126. 
* gnu/packages/lisp-xyz.scm (sbcl-alloy): Update to 20221126.
 2022-12-13 11:18:59 +01:00