Commit graph

43733 commits

Author SHA1 Message Date
Ricardo Wurmus
23ce7f3b0b
gnu: r-rhtslib: Update to 1.16.1.
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.16.1.
2019-05-06 00:14:36 +02:00
Ricardo Wurmus
c648e672b7
gnu: r-zlibbioc: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.30.0.
2019-05-06 00:14:36 +02:00
Ricardo Wurmus
3be113b706
gnu: r-motifrg: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.28.0.
2019-05-06 00:14:35 +02:00
Ricardo Wurmus
a7143246f8
gnu: r-seqlogo: Update to 1.50.0.
* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.50.0.
2019-05-06 00:14:35 +02:00
Ricardo Wurmus
6ef47ac82e
gnu: r-genomation: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.16.0.
2019-05-06 00:14:35 +02:00
Ricardo Wurmus
d726689a70
gnu: r-seqpattern: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.16.0.
2019-05-06 00:14:35 +02:00
Ricardo Wurmus
651b62c697
gnu: r-bsgenome: Update to 1.52.0.
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.52.0.
2019-05-06 00:14:35 +02:00
Ricardo Wurmus
971df3a784
gnu: r-topgo: Update to 2.36.0.
* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.36.0.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus
d31f8d1bd8
gnu: r-genomicfeatures: Update to 1.36.0.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.0.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus
40d97367f0
gnu: r-rtracklayer: Update to 1.44.0.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.0.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus
6ff6973502
gnu: r-genomicalignments: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.20.0.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus
8671d1e9d6
gnu: r-summarizedexperiment: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.14.0.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus
14561bb9e7
gnu: r-delayedarray: Update to 0.10.0.
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.10.0.
[propagated-inputs]: Add r-matrix.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus
d2e165496b
gnu: r-biostrings: Update to 2.52.0.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.52.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus
e10b67c797
gnu: r-biocparallel: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.18.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus
933571ddcd
gnu: r-biomart: Update to 2.40.0.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus
a1b9378a8e
gnu: r-annotationdbi: Update to 1.46.0.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.46.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus
4aadfcd296
gnu: r-biobase: Update to 2.44.0.
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.44.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus
b35bc56a8a
gnu: r-genomicranges: Update to 1.36.0.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.36.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus
bc0e5bc12e
gnu: r-xvector: Update to 0.24.0.
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.24.0.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus
5fadf39280
gnu: r-limma: Update to 3.40.0.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.40.0.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus
0d094ad9ab
gnu: r-variantannotation: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.30.0.
[propagated-inputs]: Add r-rhtslib.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus
1e3f53a489
gnu: r-edger: Update to 3.26.0.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.0.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus
6dc05d0a86
gnu: r-genomeinfodb: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.20.0.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus
38142114b7
gnu: r-iranges: Update to 2.18.0.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.18.0.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus
192ddab3e5
gnu: r-s4vectors: Update to 0.22.0.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.22.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus
8bdf7d55be
gnu: r-bioccheck: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.20.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus
e01b72d225
gnu: r-biocstyle: Update to 2.12.0.
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.12.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus
440af6482a
gnu: r-biocviews: Update to 1.52.0.
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.52.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus
ce52cab000
gnu: r-grohmm: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.18.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus
49f30903f0
gnu: r-shortread: Update to 1.42.0.
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.42.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus
fe40f55094
gnu: r-gostats: Update to 2.50.0.
* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.50.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus
4d88dbe6eb
gnu: r-category: Update to 2.50.0.
* gnu/packages/bioinformatics.scm (r-category): Update to 2.50.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus
08d2a26d47
gnu: r-gseabase: Update to 1.46.0.
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.46.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus
aa51a241c5
gnu: r-rbgl: Update to 1.60.0.
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.60.0.
[propagated-inputs]: Add r-bh.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus
7f737246d8
gnu: r-annotationforge: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.26.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus
0a58282de7
gnu: r-dexseq: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.30.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus
9a39193d45
gnu: r-deseq2: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.24.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus
0183163d1e
gnu: r-genefilter: Update to 1.66.0.
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.66.0.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus
295f35dfb9
gnu: r-preprocesscore: Update to 1.46.0.
* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.46.0.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus
52b4703c08
gnu: r-rgraphviz: Update to 2.28.0.
* gnu/packages/graph.scm (r-rgraphviz): Update to 2.28.0.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus
3b13b6d777
gnu: r-units: Update to 0.6-3.
* gnu/packages/cran.scm (r-units): Update to 0.6-3.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus
3961b3b900
gnu: Add r-dqrng.
* gnu/packages/cran.scm (r-dqrng): New variable.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus
b8d6dffbdd
gnu: Add r-sitmo.
* gnu/packages/cran.scm (r-sitmo): New variable.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus
0c8960df13
gnu: Add r-clue.
* gnu/packages/cran.scm (r-clue): New variable.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus
be23c491cb
gnu: Add r-batchtools.
* gnu/packages/cran.scm (r-batchtools): New variable.
2019-05-06 00:14:28 +02:00
Ricardo Wurmus
04bf86ba9f
gnu: Add r-blme.
* gnu/packages/cran.scm (r-blme): New variable.
2019-05-06 00:14:28 +02:00
Ricardo Wurmus
2b9d4f5866
gnu: Add r-scrime.
* gnu/packages/cran.scm (r-scrime): New variable.
2019-05-06 00:14:28 +02:00
Ricardo Wurmus
78735b9f34
gnu: Add r-grimport2.
* gnu/packages/cran.scm (r-grimport2): New variable.
2019-05-06 00:14:28 +02:00
Ricardo Wurmus
8128189976
gnu: Add r-rcpphnsw.
* gnu/packages/cran.scm (r-rcpphnsw): New variable.
2019-05-06 00:14:28 +02:00