John Soo
ef2f6487d7
gnu: rust-regex-syntax-0.6: Update to 0.6.13.
...
* gnu/packages/crates-io.scm (rust-regex-syntax-0.6): Update to 0.6.13.
[arguments]: Remove rust-ucd-util-0.1 from cargo-inputs.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:54 +02:00
John Soo
21f887c355
gnu: rust-serde-derive-1.0: Update to 1.0.104.
...
* gnu/packages/crates-io.scm (rust-serde-derive-1.0): Update it.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:54 +02:00
John Soo
77a164a723
gnu: Add rust-argon2rs-0.2.
...
* gnu/packages/crates-io.scm (rust-argon2rs-0.2): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:54 +02:00
John Soo
7a7ff5d36c
gnu: Add rust-term-size-0.3.
...
* gnu/packages/crates-io.scm (rust-term-size-0.3): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:54 +02:00
John Soo
5a9e88c7d1
gnu: Add rust-term-size-1.0.
...
* gnu/packages/crates-io.scm (rust-term-size-1.0): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:53 +02:00
John Soo
b43885e9e2
gnu: Add rust-redox-users-0.3.
...
* gnu/packages/crates-io.scm (rust-redox-users-0.3): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:53 +02:00
John Soo
e320b20650
gnu: Add rust-blake2-rfc-0.2.
...
* gnu/packages/crates-io.scm (rust-blake2-rfc-0.2): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:53 +02:00
John Soo
cb806c7c63
gnu: Add rust-dirs-sys-0.3.
...
* gnu/packages/crates-io.scm (rust-dirs-sys-0.3): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:53 +02:00
John Soo
b6510b1a62
gnu: rust-serde-yaml-0.8: Update to 0.8.11.
...
* gnu/packages/crates-io.scm (rust-serde-yaml-0.8): Update to 0.8.11.
[arguments]: Remove rust-version-sync-0.8 from cargo-development-inputs.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:53 +02:00
John Soo
ea78979dd4
gnu: rust-serde-json-1.0: Update to 1.0.44.
...
* gnu/packages/crates-io.scm (rust-serde-json-1.0): Update to 1.0.44.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:52 +02:00
John Soo
ec438ab295
gnu: rust-serde-cbor-0.10: Update to 0.10.2.
...
* gnu/packages/crates-io.scm (rust-serde-cbor-0.10): Update 0.10.2.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:52 +02:00
John Soo
27f158ef23
gnu: rust-serde-1.0: Update to 1.0.104.
...
* gnu/packages/crates-io.scm (rust-serde-1.0): Update to 1.0.104.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:52 +02:00
John Soo
30b36e524a
gnu: Add rust-dirs-2.0.
...
* gnu/packages/crates-io.scm (rust-dirs-2.0): New variable.
(rust-dirs-1.0): Inherit from rust-dirs-2.0.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:52 +02:00
John Soo
39bb7b29d9
gnu: Add rust-regex-1.3.
...
* gnu/packages/crates-io.scm (rust-regex-1.3): New variable.
(rust-regex-1.1): Inherit from rust-regex-1.3.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:52 +02:00
John Soo
04020a73b3
gnu: Add rust-handlebars-2.0.
...
* gnu/packages/crates-io.scm (rust-handlebars-2.0): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-01-21 16:23:48 +02:00
Ludovic Courtès
b2f948be9f
services: sane: Create the "scanner" account.
...
* gnu/services/desktop.scm (%sane-accounts, sane-service-type): New
variables.
(%desktop-services): Use SANE-SERVICE-TYPE instead of 'simple-service'.
* doc/guix.texi (Desktop Services): Document 'sane-service-type'.
2020-01-21 15:01:46 +01:00
Ludovic Courtès
5dc6d5ce99
gnu: upower: Install 'dbus-1/system.d/org.freedesktop.UPower.conf' to etc/.
...
Fixes <https://bugs.gnu.org/39203 >.
Reported by Jesse Gibbons <jgibbons2357@gmail.com>.
* gnu/packages/gnome.scm (upower)[source]: Add 'modules' and 'snippet'.
2020-01-21 15:01:46 +01:00
Tobias Geerinckx-Rice
a19fb6a436
gnu: Use HTTPS for (gnu packages bioinformatics) home pages.
...
* gnu/packages/bioinformatics (bamm, ribodiff, python-biopython)
(discrover, hisat, hisat2, htseq, fastqc, htslib, python2-pbcore, roary)
(sortmerna, r-qtl, multiqc, r-deseq, r-fastseg, sambamba, trim-galore)
(gess, kentutils, bismark, kallisto, sailfish, python-hicexplorer)
(pplacer, python2-checkm-genome, r-velocyto)[home-page]: Use HTTPS.
2020-01-21 02:15:32 +01:00
Tobias Geerinckx-Rice
72607005e4
gnu: r-gage: Update home page.
...
* gnu/packages/bioinformatics.scm (r-gage)[home-page]: Update.
2020-01-21 02:15:32 +01:00
Tobias Geerinckx-Rice
0388046068
gnu: sra-tools: Update home page.
...
* gnu/packages/bioinformatics.scm (sra-tools)[home-page]: Update.
2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
0eeaf1ac3c
gnu: raxml: Update home page.
...
* gnu/packages/bioinformatics.scm (raxml)[home-page]: Update.
2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
5832b88c45
gnu: prodigal: Update home page.
...
* gnu/packages/bioinformatics.scm (prodigal)[home-page]: Use source code repository as home page.
2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
030fe2fb7e
gnu: miso: Update home page.
...
* gnu/packages/bioinformatics.scm (miso)[home-page]: Update.
2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
b725655fce
gnu: grit: Update home page.
...
* gnu/packages/bioinformatics.scm (grit)[home-page]: Use source code
repository as home page.
2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
b56f2b6366
gnu: express-beta-diversity: Update home page.
...
The original is not coming back:
<https://github.com/dparks1134/ExpressBetaDiversity/issues/11 >.
* gnu/packages/bioinformatics.scm (express-beta-diversity)[home-page]:
Use source code repository as home page.
2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
568bd2e382
gnu: dendropy: Update home page.
...
* gnu/packages/bioinformatics.scm (dendropy)[home-page]: Update.
2020-01-21 02:15:31 +01:00
Julien Lepiller
5aa573d8c7
gnu: ocaml-markup: Update to 0.8.2.
...
gnu/packages/ocaml.scm (ocaml-markup): Update to 0.8.2.
2020-01-21 01:12:26 +01:00
Julien Lepiller
16829d3b8a
gnu: ocaml-lwt: Update to 5.1.1.
...
* gnu/packages/ocaml.scm (ocaml-lwt): update to 5.1.1.
2020-01-21 01:12:05 +01:00
Julien Lepiller
2624921a64
gnu: Add ocaml-mmap.
...
* gnu/packages/ocaml.scm (ocaml-mmap): New variable.
2020-01-21 01:11:39 +01:00
Julien Lepiller
2e038f36f8
gnu: ocaml-bisect-ppx: Update to 1.4.2.
...
* gnu/packages/ocaml.scm (ocaml-bisect-ppx): Update to 1.4.2.
2020-01-21 01:11:35 +01:00
Julien Lepiller
73e01ae456
gnu: ocaml-qtest. Update to 2.10.1.
...
* gnu/packages/ocaml.scm (ocaml-qtest): Update to 2.10.1.
2020-01-21 01:11:31 +01:00
Julien Lepiller
795cf2a3b5
gnu: ocaml-qcheck: Update to 0.12.
...
* gnu/packages/ocaml.scm (ocaml-qcheck): Update to 0.12.
2020-01-21 01:11:20 +01:00
Julien Lepiller
c2eb8c7ef7
gnu: camlp5: Update to 7.10.
...
* gnu/packages/ocaml.scm (camlp5): Upadte to 7.10.
2020-01-21 01:10:49 +01:00
Julien Lepiller
efeda080ef
gnu: opam: Update to 2.0.6.
...
* gnu/pckages/ocaml.scm (opam): Update to 2.0.6.
2020-01-21 01:10:42 +01:00
Tobias Geerinckx-Rice
99db6db7be
gnu: Use HTTPS for bioconductor.org.
...
* gnu/packages/bioinformatics.scm (r-homo-sapiens)[source]: Use HTTPS.
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked,
r-cghcall, r-diffbind, r-cghbase, r-ripseeker, r-chippeakanno,
r-qdnaseq, r-marray, r-multtest)[home-page]: Likewise.
* gnu/packages/graph.scm (r-rgraphviz)[home-page]: Likewise.
2020-01-21 00:43:39 +01:00
Tobias Geerinckx-Rice
570b89f401
gnu: gzdoom: Update to 4.3.2.
...
* gnu/packages/games.scm (gzdoom): Update to 4.3.2.
[source]: Use GIT-FETCH and GIT-FILE-NAME. Apply system libgme patch.
Update snippet.
[arguments]: Allow system libgme. Update substitution file names.
[inputs]: Use fluidsynth@2.
* gnu/packages/patches/gzdoom-find-system-libgme.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-01-21 00:43:24 +01:00
Tobias Geerinckx-Rice
21e733ce4e
gnu: supercollider: Update to 3.10.4.
...
* gnu/packages/audio.scm (supercollider): Update to 3.10.4.
[source]: Remove patch.
* gnu/packages/patches/supercollider-boost-1.70-build-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-01-21 00:43:24 +01:00
Ricardo Wurmus
fa730a9780
Revert "gnu: Add guile3.0-commonmark."
...
This reverts commit 346386f3f7
.
A Guile 3.0 variant had already been added with commit
1fa3423236
.
2020-01-21 00:05:50 +01:00
Ricardo Wurmus
77c95ee60c
gnu: Add guile3.0-pfds.
...
* gnu/packages/guile-xyz.scm (guile3.0-pfds): New variable.
2020-01-20 23:49:53 +01:00
Ricardo Wurmus
b0b725ed40
gnu: Add guile3.0-wisp.
...
* gnu/packages/guile-xyz.scm (guile3.0-wisp): New variable.
2020-01-20 23:49:53 +01:00
Ricardo Wurmus
346386f3f7
gnu: Add guile3.0-commonmark.
...
* gnu/packages/guile-xyz.scm (guile3.0-commonmark): New variable.
(guile-commonmark)[arguments]: Patch configure file.
2020-01-20 23:49:52 +01:00
Ludovic Courtès
37eda8c044
installer: Disable F12 hot key.
...
Fixes <https://bugs.gnu.org/38562 >.
Reported by Brice Waegeneire <brice@waegenei.re>.
Previously, pressing F12 or shift-F2 in one of those forms would cause
it to exit, usually with the default value #t because the caller had not
provided a useful hotkey "callback".
* gnu/installer/newt/page.scm (run-input-page, run-confirmation-page)
(run-listbox-selection-page, run-checkbox-tree-page)
(run-file-textbox-page): Pass #:flags FLAG-NOF12 to 'make-form'.
2020-01-20 23:21:00 +01:00
Ludovic Courtès
48659aa221
installer: Makes sure the installer proceeds after hitting "Edit".
...
Fixes <https://bugs.gnu.org/39199 >.
Reported by Jonathan Brielmaier <jonathan.brielmaier@web.de>.
* gnu/installer/newt/page.scm (run-file-textbox-page): Move 'loop' to
the beginning of the body. Do not call 'loop' from the 'dynamic-wind'
exit handler as we would not return the value of the second call to
'loop'.
2020-01-20 23:20:59 +01:00
Marius Bakke
25623647e9
gnu: guile-git: Update to 0.3.0.
...
* gnu/packages/guile.scm (guile-git): Update to 0.3.0.
[source]: Download tarball with URL-FETCH.
[source](file-name, modules, snippet): Remove.
[native-inputs]: Remove AUTOCONF, AUTOMAKE and TEXINFO.
2020-01-20 21:53:53 +01:00
Marius Bakke
89595f98d0
gnu: qt@4: Build with libjpeg-turbo.
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* gnu/packages/qt.scm (qt-4)[inputs]: Change from LIBJPEG-8 to LIBJPEG-TURBO.
2020-01-20 21:53:52 +01:00
Marius Bakke
96738cb11f
gnu: stepmania: Build with libjpeg-turbo.
...
* gnu/packages/games.scm (stepmania)[inputs]: Change from LIBJPEG-8 to
LIBJPEG-TURBO.
2020-01-20 21:53:52 +01:00
Marius Bakke
7b24b76b98
gnu: mame: Build with libjpeg-turbo.
...
* gnu/packages/emulators.scm (mame)[inputs]: Change from LIBJPEG-8 to
LIBJPEG-TURBO.
2020-01-20 21:53:52 +01:00
Marius Bakke
43987c977c
gnu: mailutils: Update to 3.8.
...
* gnu/packages/mail.scm (mailutils): Update to 3.8.
[arguments]: Adjust substitutions.
2020-01-20 21:53:52 +01:00
Marius Bakke
37f4454734
gnu: xorg-server: Update to 1.20.7.
...
* gnu/packages/xorg.scm (xorg-server): Update to 1.20.7.
2020-01-20 21:53:52 +01:00
Marius Bakke
d18116d9b5
gnu: libsrtp: Build shared library.
...
* gnu/packages/telephony.scm (libsrtp)[arguments]: Add #:phases.
2020-01-20 21:53:52 +01:00