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52379 commits

Author SHA1 Message Date
Ludovic Courtès
2d6f68aa3b
gnu: intel-mpi-benchmarks: Merge with "imb-openmpi".
* gnu/packages/mpi.scm (intel-mpi-benchmarks): Remove.
* gnu/packages/benchmark.scm (imb): Rename to...
(intel-mpi-benchmarks): ... this.  Change 'name'.  Update to 2019.3.
[arguments]: Remove 'build phase.  Rewrite 'install phase.  Pass
 #:parallel-build? and #:make-flags.
(intel-mpi-benchmarks/openmpi): New variable.
(imb-openmpi): Rewrite in terms of 'deprecated-package'.
2019-12-20 22:35:12 +01:00
Ludovic Courtès
f94f9d67e6
gnupg: 'gnupg-verify*' returns a status symbol.
This allows callers to distinguish between signature verification
failure and missing key.

* guix/gnupg.scm (gnupg-receive-keys): Return true on success.
(gnupg-verify*): Check return value of 'gnupg-receive-keys'.  Return two
values, the first one being a symbol.
* guix/upstream.scm (download-tarball): Get the two return values of
'gnupg-verify*', and match on the first one.
* gnu/packages/bash.scm (download-patches): Check the first return value
of 'gnupg-verify*'.
2019-12-20 22:06:05 +01:00
Ricardo Wurmus
1101c73c7f
gnu: geda-gaf: Update to 1.10.0.
* gnu/packages/engineering.scm (geda-gaf): Update to 1.10.0.
[arguments]: Adjust phase "disable-failing-tests".
[inputs]: Add gamin and python-2.
2019-12-20 22:01:19 +01:00
Ricardo Wurmus
1e600ed0f7
gnu: Add gamin.
* gnu/packages/gnome.scm (gamin): New variable.
2019-12-20 21:26:58 +01:00
Ricardo Wurmus
046fecdcb9
gnu: r-desolve: Update to 1.27.
* gnu/packages/cran.scm (r-desolve): Update to 1.27.
2019-12-20 21:26:32 +01:00
Ricardo Wurmus
126a7b4418
gnu: r-insol: Update to 1.2.1.
* gnu/packages/cran.scm (r-insol): Update to 1.2.1.
[propagated-inputs]: Remove r-rgdal.
2019-12-20 21:26:31 +01:00
Ricardo Wurmus
db904d5c86
gnu: r-plot3d: Update to 1.3.
* gnu/packages/cran.scm (r-plot3d): Update to 1.3.
2019-12-20 21:26:31 +01:00
Ricardo Wurmus
20622ad131
gnu: r-sctransform: Update to 0.2.1.
* gnu/packages/cran.scm (r-sctransform): Update to 0.2.1.
[propagated-inputs]: Remove r-future.
2019-12-20 21:26:31 +01:00
Ricardo Wurmus
550a1e01cc
gnu: r-rootsolve: Update to 1.8.2.
* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.2.
2019-12-20 21:26:31 +01:00
Ricardo Wurmus
4aeb0a2b2e
gnu: r-reticulate: Update to 1.14.
* gnu/packages/cran.scm (r-reticulate): Update to 1.14.
[propagated-inputs]: Add r-rappdirs.
2019-12-20 21:26:31 +01:00
Ricardo Wurmus
cd2652f6b8
gnu: r-pillar: Update to 1.4.3.
* gnu/packages/cran.scm (r-pillar): Update to 1.4.3.
2019-12-20 21:26:31 +01:00
Ricardo Wurmus
bdf552ee4c
gnu: r-vctrs: Update to 0.2.1.
* gnu/packages/cran.scm (r-vctrs): Update to 0.2.1.
2019-12-20 21:26:31 +01:00
Ricardo Wurmus
63b4c77915
gnu: r-recipes: Update to 0.1.8.
* gnu/packages/cran.scm (r-recipes): Update to 0.1.8.
2019-12-20 21:26:31 +01:00
Ricardo Wurmus
571f4689f9
gnu: r-psych: Update to 1.9.12.
* gnu/packages/cran.scm (r-psych): Update to 1.9.12.
2019-12-20 21:26:31 +01:00
Ricardo Wurmus
6b662ce33e
gnu: r-bbmle: Update to 1.0.22.
* gnu/packages/cran.scm (r-bbmle): Update to 1.0.22.
[propagated-inputs]: Add r-bdsmatrix, r-matrix, and r-mvtnorm.
2019-12-20 21:26:30 +01:00
Ricardo Wurmus
a3569a327a
gnu: Add r-bdsmatrix.
* gnu/packages/cran.scm (r-bdsmatrix): New variable.
2019-12-20 21:26:30 +01:00
Ricardo Wurmus
ccf3cafa4c
gnu: r-latticeextra: Update to 0.6-29.
* gnu/packages/statistics.scm (r-latticeextra): Update to 0.6-29.
[propagated-inputs]: Add r-jpeg and r-png.
2019-12-20 21:26:30 +01:00
Ricardo Wurmus
95cd4a19cd
gnu: r-dt: Update to 0.11.
* gnu/packages/statistics.scm (r-dt): Update to 0.11.
2019-12-20 21:26:30 +01:00
Ricardo Wurmus
8dfaa62a9e
gnu: r-rsqlite: Update to 2.1.5.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.5.
2019-12-20 21:26:30 +01:00
Ricardo Wurmus
8abfddb6b4
gnu: r-mime: Update to 0.8.
* gnu/packages/statistics.scm (r-mime): Update to 0.8.
2019-12-20 21:26:30 +01:00
Ricardo Wurmus
60cc8779cc
gnu: r-bh: Update to 1.72.0-2.
* gnu/packages/statistics.scm (r-bh): Update to 1.72.0-2.
2019-12-20 21:26:30 +01:00
Ricardo Wurmus
02ee630320
gnu: r-foreign: Update to 0.8-73.
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-73.
2019-12-20 21:26:30 +01:00
Ricardo Wurmus
ede38ffe16
gnu: r-mass: Update to 7.3-51.5.
* gnu/packages/statistics.scm (r-mass): Update to 7.3-51.5.
2019-12-20 21:26:30 +01:00
Ricardo Wurmus
20fb28b229
gnu: r-boot: Update to 1.3-24.
* gnu/packages/statistics.scm (r-boot): Update to 1.3-24.
2019-12-20 21:26:30 +01:00
Ricardo Wurmus
61e21c0899
gnu: r-scater: Update to 1.14.6.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.14.6.
2019-12-20 21:26:26 +01:00
Leo Famulari
8246bbc30f
gnu: WireGuard: Update to 0.0.20191219.
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20191219.
2019-12-20 14:26:14 -05:00
Ricardo Wurmus
ef0ef831bc
gnu: lepton-eda: Update to 1.9.9-20191003.
* gnu/packages/engineering.scm (lepton-eda): Update to 1.9.9-20191003.
[inputs]: Do not inherit from geda-gaf; replace guile-2.0 with guile-2.2.
[arguments]: Add phase to compile Scheme files.
2019-12-20 11:23:50 +01:00
Efraim Flashner
0e773da02d
gnu: catimg: Update to 2.6.0.
* gnu/packages/image-viewers.scm (catimg): Update to 2.6.0.
2019-12-20 10:53:45 +02:00
Efraim Flashner
446b4d4ffc
gnu: tig: Update to 2.5.0.
* gnu/packages/version-control.scm (tig): Update to 2.5.0.
2019-12-20 10:35:23 +02:00
Efraim Flashner
5d64c1b418
gnu: vim-airline: Update to 0.11.
* gnu/packages/vim.scm (vim-airline): Update to 0.11.
2019-12-20 10:30:01 +02:00
Efraim Flashner
a101b15b5a
gnu: mutt: Add preferred source uri.
* gnu/packages/mail.scm (mutt)[source]: Add upstream's preferred uri.
2019-12-20 09:20:51 +02:00
Efraim Flashner
9dd5249e96
gnu: mutt: Update to 1.13.2.
* gnu/packages/mail.scm (mutt): Update to 1.13.2.
2019-12-20 09:20:14 +02:00
Leo Prikler
5be0ff33ff
gnu: Add gnome-shell-extension-hide-app-icon.
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-hide-app-icon):
New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-12-20 08:59:47 +02:00
Jonathan Brielmaier
ae4e141452
gnu: libhandy: Update description.
* gnu/packages/gnome.scm (libhandy)[description]: Fix typo and make
clear it's not only for mobile interfaces.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-12-19 23:48:03 +01:00
Jonathan Brielmaier
f6501b9f83
gnu: Update libhandy to 0.0.12.
* gnu/packages/gnome.scm (libhandy): Update to 0.0.12.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-12-19 23:48:03 +01:00
Giacomo Leidi
8a02ae7fae
gnu: Add gnome-shell-extension-dash-to-panel.
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-dash-to-panel): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-12-19 23:48:02 +01:00
Ludovic Courtès
d8169d05bb
gnupg: Compile regexps only once.
This halves the run time on a large number of subsequent 'gnupg-verify'
calls.

* guix/gnupg.scm (sigid-rx, goodsig-rx, validsig-rx, expkeysig-rx)
(errsig-rx): New variables, lifted from...
(gnupg-verify)[status-line->sexp]: ... here.
2019-12-19 23:48:02 +01:00
Ricardo Wurmus
6a0b9500f9
gnu: libfive: Update to 0-3.6e39254.
* gnu/packages/engineering.scm (libfive): Update to 0-3.6e39254.
[arguments]: Add build phase "find-catch".
[inputs]: Replace catch-framework with catch-framework2.
[license]: Change license for library.
2019-12-19 23:21:06 +01:00
Ricardo Wurmus
8aa59a54e9
gnu: catch-framework2: Update to 2.1.2.
* gnu/packages/check.scm (catch-framework2): Update to 2.1.2.
(catch-framework2-1): New variable.
* gnu/packages/cpp.scm (fifo-map)[native-inputs]: Use catch-framework2-1.
2019-12-19 23:21:06 +01:00
Ricardo Wurmus
719d8d5b93
gnu: Add java-piccolo2d-extras.
* gnu/packages/java-graphics.scm (java-piccolo2d-extras): New variable.
2019-12-19 23:21:06 +01:00
Ricardo Wurmus
1fb76dce3e
gnu: Add java-piccolo2d-core.
* gnu/packages/java-graphics.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-12-19 23:21:06 +01:00
Pierre Neidhardt
edf8152563
gnu: sbcl: Update to 1.5.9.
* gnu/packages/lisp.scm (sbcl-boot0): New variable.
Build 1.5.8 against CLISP.
(sbcl): Build versions >= 1.5.9 against sbcl-boot0.
2019-12-19 19:12:40 +01:00
Brett Gilio
4b3ff36228
Update email for Brett Gilio.
* .mailmap: Add name and email for Brett Gilio.
* gnu/local.mk, gnu/packages/admin.scm, gnu/packages/audio.scm,
  gnu/packages/bittorrent.scm, gnu/packages/build-tools.scm,
  gnu/packages/cran.scm, gnu/packages/emacs-xyz.scm,
  gnu/packages/messaging.scm, gnu/packages/python-xyz.scm,
  gnu/packages/sml.scm, gnu/packages/terminals.scm, gnu/packages/wm.scm:
  Update email for Brett Gilio.
2019-12-19 11:35:23 -06:00
Pierre Neidhardt
f2c71f62dd
gnu: dxvk: Update to 1.5.
* gnu/packages/wine.scm (dxvk): Update to 1.5.
2019-12-19 16:24:45 +01:00
Mathieu Othacehe
a21b88f10c
gnu: wireless-tools: Fix cross-compilation.
* gnu/packages/linux.scm (wireless-tools)[arguments]: Replace 'configure phase
to substitute CC, AR and RANLIB Makefile variables to suitable values when
cross-compiling.
2019-12-19 15:38:24 +01:00
Julien Lepiller
74471036f6
gnu: behave: Fix tests.
* gnu/packages/check.scm (behave): Add missing directory to PYTHONPATH before
tests.
2019-12-19 15:36:40 +01:00
Mathieu Othacehe
445013b69d
gnu: isc-dhcp: Fix cross-compilation.
* gnu/packages/admin.scm (isc-dhcp)[arguments]: Add a configure flag to
specify randomdev path, which is needed when cross-compiling. Also add a
fix-bind-cross-compilation phase.
2019-12-19 15:04:54 +01:00
Ivan Vilata-i-Balaguer
a21d9b8d5c
gnu: mumble: Update to 1.3.0.
* gnu/packages/telephony.scm (mumble): Update to 1.3.0.
[source]: Remove patch. Update snippet.
[build-system]: Switch to qt-build-system.
[arguments]: Update custom 'configure phase. Add custom phase to disable
murmur ice.
[inputs]: Remove protobuf-3.5, libx11, qt-4, alsa-lib. Add protobuf,
mesa, qtbase, qtsvg.
[native-inputs]: Add python, qttools.
[license]: Update license info.
* gnu/packages/patches/mumble-1.2.19-abs.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-12-19 13:03:04 +02:00
Efraim Flashner
003fcf23d9
guix: Fix %hurd-systems list.
* guix/packages.scm (%hurd-systems): Replace i585-gnu with i586-gnu.
2019-12-19 10:37:20 +02:00
John Soo
43001931a2
gnu: Fix python-pyside-2.
* gnu/packages/qt.scm (python-pyside-2)[inputs]: Remove llvm-6, clang-6.
Add clang-toolchain-6.
[arguments]: Adjust for change in inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-12-19 10:36:43 +02:00