ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2024-11-17 20:27:36 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions
91009 commits 1 branch 0 tags 448 MiB
Commit graph

91009 commits

This branch
This branch
All branches
Author SHA1 Message Date
Maxim Cournoyer
34fb1c4ba9
gnu: Add rust-rustc-version-0.4. 
* gnu/packages/crates-io.scm (rust-rustc-version-0.4): New variable.
(rust-rustc-version-0.3): Inherit from the above.
 2022-01-10 11:50:50 -05:00
Maxim Cournoyer
9f3ed4d57e
gnu: Add rust-concolor-control. 
* gnu/packages/crates-io.scm (rust-concolor-control): New variable.
 2022-01-10 11:49:13 -05:00
Maxim Cournoyer
330c3bee85
gnu: Add rust-concolor-query. 
* gnu/packages/crates-io.scm (rust-concolor-query): New variable.
 2022-01-10 11:49:13 -05:00
Maxim Cournoyer
8169079a5a
gnu: Add rust-cfg-expr-0.8. 
* gnu/packages/crates-io.scm (rust-cfg-expr-0.8): New variable.
 2022-01-10 11:49:12 -05:00
Maxim Cournoyer
cdb2b115a8
gnu: mozjs-78: Disable rust-simd to workaround a build failure. 
* gnu/packages/gnuzilla.scm (mozjs-78)
[configure-flags]: Disable rust-simd to avoid a build failure that occurs when
Rust is newer than 1.54.0.
 2022-01-10 11:47:04 -05:00
Hartmut Goebel
c3c943055d
build/python: Improve error output in sanity check. 
Instead of printing the "str()" representation of the excaption, print the
"repr()" representation. This will print the name of the exception and thus
ease understanding the actual error.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:47:03 -05:00
Maxim Cournoyer
d90080db54
gnu: rust: Use rust-1.57.0. 
* gnu/packages/rust.scm (rust-1.54): Make it a private variable.  Move
definition to...
(rust-1.57): ... here.
(rust-1.55, rust-1.56): Make private.
* gnu/packages/shells.scm (nushell)[rust]: Remove argument.
 2022-01-10 11:47:03 -05:00
Maxim Cournoyer
c292cf21f7
gnu: simple-scan: Add python to native inputs. 
* gnu/packages/gnome.scm (simple-scan)[native-inputs]: Add python.
 2022-01-10 11:47:03 -05:00
Maxim Cournoyer
f353ed53a9
gnu: gnome-calculator: Add python to native inputs. 
* gnu/packages/gnome.scm (gnome-calculator)[native-inputs]: Add python.
 2022-01-10 11:47:03 -05:00
Maxim Cournoyer
32d38a7142
gnu: gnome-screenshot: Add python to native inputs. 
* gnu/packages/gnome.scm (gnome-screenshot)[native-inputs]: Add python.
 2022-01-10 11:47:03 -05:00
Maxim Cournoyer
ff9c684ddf
gnu: file-roller: Add python to native inputs. 
* gnu/packages/gnome.scm (file-roller)[native-inputs]: Add python.
 2022-01-10 11:47:02 -05:00
Maxim Cournoyer
836daaf8f6
gnu: python-pandas: Update to 1.3.5. 
* gnu/packages/python-science.scm (python-pandas): Update to 1.3.5.
[phases]{check}: Add a reference to the network accessing tests issue, now
reported upstream.  Reinstate the excelwriter tests.
[propagated-inputs]: Add python-xlsxwriter.
[native-inputs]: Remove python-nose.
 2022-01-10 11:47:02 -05:00
Maxim Cournoyer
b92d09cda1
gnu: python-xlwt: Add comment about maintainership of the package. 
The package appears to be abandoned.

* gnu/packages/python-xyz.scm (python-xlwt): Add comment.
 2022-01-10 11:47:02 -05:00
Maxim Cournoyer
00bad443ef
gnu: python-openpyxl: Update to 3.0.9. 
* gnu/packages/python-xyz.scm (python-openpyxl): Update to 3.0.9.
 2022-01-10 11:47:01 -05:00
Maxim Cournoyer
0c83eca719
gnu: python-xlrd: Update to 2.0.1. 
* gnu/packages/python-xyz.scm (python-xlrd): Update to 2.0.1.
[source]: Use git-fetch.
[arguments]: Delete field.
[native-inputs]: Add python-pytest.
 2022-01-10 11:47:01 -05:00
Maxim Cournoyer
48baca342d
gnu: mutter: Add python to native inputs. 
* gnu/packages/gnome.scm (mutter)[native-inputs]: Add python.
 2022-01-10 11:47:01 -05:00
Maxim Cournoyer
ac1f60f4fe
gnu: libgweather: Add python to native inputs. 
* gnu/packages/gnome.scm (libgweather)[native-inputs]: Add python.
 2022-01-10 11:47:01 -05:00
Maxim Cournoyer
235a083103
gnu: baobab: Add python to native inputs. 
* gnu/packages/gnome.scm (baobab)[native-inputs]: Add python.
 2022-01-10 11:47:00 -05:00
Maxim Cournoyer
c1482ef315
gnu: python-pytest-timeout: Update to 2.0.2. 
* gnu/packages/check.scm (python-pytest-timeout): Update to 2.0.2.
 2022-01-10 11:47:00 -05:00
Leo Famulari
8636d02955
gnu: binutils: Fix CVE-2021-45078. 
This is for the release branch.

Should we also use a graft for the master branch? It would be even
better if we could add a binutils-next package that users could install,
in my opinion.

* gnu/packages/patches/binutils-CVE-2021-45078.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (binutils)[source]: Use it.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:46:57 -05:00
Maxim Cournoyer
db912d77a8
gnu: glib: Update to 2.70.2. 
* gnu/packages/glib.scm (glib): Update to 2.70.2.
 2022-01-10 11:44:52 -05:00
Maxim Cournoyer
ec26595e30
gnu: meson: Update to 0.60.3. 
* gnu/packages/build-tools.scm (gn): Update to 0.60.3.
 2022-01-10 11:44:52 -05:00
Maxim Cournoyer
abb5a92cbc
gnu: glibmm: Update to 2.70.0 and apply guix style. 
* gnu/packages/glib.scm (glibmm): Update to 2.70.0.
[native-inputs]: Use new style.
 2022-01-10 11:44:51 -05:00
Sarah Morgensen
64f7e53a5d
gnu: cpuid: Remove obsolete file permissions change. 
* gnu/packages/linux.scm (cpuid)[arguments]<#:phases>{fix-makefile}:
Remove Makefile gzip permissions patch.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:51 -05:00
Sarah Morgensen
27cc25e1a4
gnu: pre-commit: Remove obsolete phase. 
* gnu/packages/version-control.scm (pre-commit)[arguments]<#:phases>:
Remove 'make-gz-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:51 -05:00
Sarah Morgensen
95cb49b475
gnu: go-github-com-prometheus-common: Remove obsolete phase. 
* gnu/packages/syncthing.scm (go-github-com-prometheus-common)
[arguments]<#:phases>: Remove 'make-gzip-archive-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:51 -05:00
Sarah Morgensen
fa7b52ff57
gnu: python-pdfminer-six: Remove obsolete phase. 
* gnu/packages/python-xyz.scm (python-pdfminer-six)[arguments]
<#:phases>: Remove 'make-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:50 -05:00
Sarah Morgensen
a97d659e13
gnu: arcanist: Remove obsolete phase. 
* gnu/packages/phabricator.scm (arcanist)[arguments]<#:phases>: Remove
'make-compressed-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:50 -05:00
Sarah Morgensen
b623ee2fb6
gnu: helm: Remove obsolete phase. 
* gnu/packages/music.scm (helm)[arguments]<#:phases>: Remove
'make-gz-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:50 -05:00
Sarah Morgensen
9d55296898
gnu: lmms: Remove obsolete phase. 
* gnu/packages/music.scm (lmms)[arguments]<#:phases>: Remove
'make-manpages-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:50 -05:00
Sarah Morgensen
f7d4bf6205
gnu: jalv-select: Remove obsolete phase. 
* gnu/packages/music.scm (jalv-select)[arguments]<#:phases>: Remove
'make-manpages-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:50 -05:00
Sarah Morgensen
18e872b805
gnu: python-scikit-learn: Remove obsolete phase. 
* gnu/packages/machine-learning.scm (python-scikit-learn)[arguments]
<#:phases>: Remove 'make-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:49 -05:00
Sarah Morgensen
b67d82972e
gnu: go-ipfs: Remove obsolete phase. 
* gnu/packages/ipfs.scm (go-ipfs)[arguments]<#:phases>: Remove
'make-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:49 -05:00
Sarah Morgensen
1ba19f4bf1
gnu: python-plotly: Remove obsolete phase. 
* gnu/packages/graph.scm (python-plotly)[arguments]<#:phases>: Remove
'make-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:49 -05:00
Sarah Morgensen
21566bfd49
gnu: go-github-com-gdamore-tcell: Remove obsolete phase. 
* gnu/packages/golang.scm (go-github-com-gdamore-tcell)[arguments]
<#:phases>: Remove 'make-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:49 -05:00
Sarah Morgensen
8347c49e56
gnu: go-github-com-docker-distribution: Remove obsolete phase. 
* gnu/packages/golang.scm (go-github-com-docker-distribution)[arguments]
<#:phases>: Remove 'make-gzip-archive-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:49 -05:00
Sarah Morgensen
37f6126f9f
gnu: go-golang-org-x-crypto: Remove obsolete phase. 
* gnu/packages/golang.scm (go-golang-org-x-crypto)[arguments]<#:phases>:
Remove 'make-gzip-archive-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:48 -05:00
Sarah Morgensen
e0940ed843
gnu: po4a: Remove obsolete phase. 
* gnu/packages/gettext.scm (po4a)[arguments]<#:phases>: Remove 'make-compressed-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:48 -05:00
Sarah Morgensen
6dc8a61bb1
gnu: emacs: Remove obsolete phase. 
* gnu/packages/emacs.scm (emacs)[arguments]<#:phases>: Remove
'make-compressed-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:48 -05:00
Sarah Morgensen
0d04504362
gnu: cups-minimal: Remove obsolete phase. 
* gnu/packages/cups.scm (cups-minimal)[arguments]<#:phases>: Remove
'make-manpages-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:48 -05:00
Sarah Morgensen
b9e703da9d
gnu: clipper: Remove obsolete phase. 
* gnu/packages/bioinformatics.scm (clipper)[arguments]<#:phases>: Remove
'make-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:48 -05:00
Sarah Morgensen
85e43978a4
gnu: python-biom-format: Remove obsolete phase. 
* gnu/packages/bioinformatics.scm (python-biom-format)[arguments]
<#:phases>: Remove 'make-files-writable phase.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:47 -05:00
Sarah Morgensen
0f71f55a60
build-system/gnu: Make gzip files writable before resetting timestamps. 
guix/build/gnu-build-system.scm (reset-gzip-timestamps): Ensure gzip
files are writable before resetting their timestamps.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-01-10 11:44:47 -05:00
Maxim Cournoyer
c61e742854
gnu: tbb-2020: Use ld.gold to work around segfaults in check phase. 
* gnu/packages/tbb.scm (tbb-2020)
[configure-flags]: Use -fuse-ld=gold in CFLAGS.
[native-inputs]: Add ld-gold-wrapper.
 2022-01-10 11:44:47 -05:00
Maxim Cournoyer
5651e46983
gnu: python-igraph: Update to 0.9.8. 
* gnu/packages/graph.scm (python-igraph): Update to 0.9.8.
[origin]: Fetch from git.
[configure-flags]: Delete argument.
[phases]{build}: No longer override phase.
{check}: Preserve ordering and streamline.
{specify-libigraph-location}: New phase.
[native-inputs]: Remove pkg-config.
[home-page]: Update.
 2022-01-10 11:44:47 -05:00
Maxim Cournoyer
3c50cb75ee
gnu: igraph: Update to 0.9.5. 
* gnu/packages/graph.scm (igraph): Update to 0.9.5.
[source]: Add snippet to fully unbundle.
[build-system]: Use cmake-build-system.
[configure-flags]: Replace all by just '-DBUILD_SHARED_LIBS=ON'.
[native-inputs]: Add pkg-config.
[inputs]{zlib}: Delete input.
{arpack-ng, plfit, suitesparse}: New inputs.
 2022-01-10 11:44:47 -05:00
Maxim Cournoyer
36681885d4
gnu: Add plfit. 
* gnu/packages/graph.scm (plfit): New variable.
 2022-01-10 11:44:46 -05:00
Maxim Cournoyer
64dac22b17
gnu: python-pysam: Update to 0.18.0. 
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.18.0.
[source]: Add FIXME to clarify bundled libraries in use.
[phases]{check}: Streamline.
[propagated-inputs]: Use latest htslib (1.14).
[native-inputs]: Use latest samtools and bcftools (1.14).  Remove python-nose.
 2022-01-10 11:44:46 -05:00
Maxim Cournoyer
801d0ed622
gnu: bcftools: Update to 1.14. 
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.14.
(bcftools-1.12): New variable.
(bcftools-1.10): Use package/inherit and delete trailing #t.
[name]: Delete field.
 2022-01-10 11:44:46 -05:00
Maxim Cournoyer
23fdb5a69c
gnu: samtools: Update to 1.14. 
* gnu/packages/bioinformatics.scm (samtools): Update to 1.14.
[modules]: Delete argument.
[phases]{install-library, install-headers}: Delete phases.  This version no
longer includes the legacy library (it links to htslib directly).
(samtools-1.12): New variable.
 2022-01-10 11:44:46 -05:00