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Maxim Cournoyer
3c3dbb0290
tests: guix-system: Drop the i686-linux desktop image test. 
Desktop these days means having Rust support (GNOME), which i686 currently
lacks on Guix.

* tests/guix-system.sh: Do not attempt to build the desktop.tmpl image for
i686-linux.
 2023-04-19 20:24:28 -04:00
John Kehayias
9c15743c4a
gnu: samba: Update to 4.18.1 [security fixes]. 
Fixes CVE-2023-0922 and CVE-2023-0614.

* gnu/packages/samba.scm (samba): Update to 4.18.1.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-04-19 20:24:28 -04:00
Maxim Cournoyer
2d33e6d6e8
gnu: samba: Make the python-cryptography input conditional. 
* gnu/packages/samba.scm (samba/pinned) [arguments]: Conditionally enable self tests
in configure phase.
[native-inputs]:  Conditionally add python-cryptography.

Reported-by: John Kehayias <john.kehayias@protonmail.com>
 2023-04-19 20:24:28 -04:00
Maxim Cournoyer
ed854ad8e6
tests: Fix texlive->guix-package test. 
The home page for the package had changed.

* tests/texlive.scm ("texlive->guix-package"): Match the home-page and
synopsis inexactly to avoid future similar breakages.
 2023-04-19 20:12:58 -04:00
Maxim Cournoyer
1b0a095a81
tests: Re-add debug output to a package tests. 
* tests/packages.scm ("fold-available-packages with/without cache"):
Re-introduce debugging output.
 2023-04-19 20:12:28 -04:00
Ricardo Wurmus
6834f24096
gnu: r-dmrseq: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.18.1.
 2023-04-19 20:12:28 -04:00
Ricardo Wurmus
f26cf1895b
gnu: r-beachmat: Update to 2.14.2. 
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.14.2.
 2023-04-19 20:12:28 -04:00
Ricardo Wurmus
cb85ea56a2
gnu: r-gdsfmt: Update to 1.34.1. 
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.34.1.
 2023-04-19 20:12:28 -04:00
Ricardo Wurmus
5ccd264893
gnu: r-ebimage: Update to 4.40.1. 
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.40.1.
 2023-04-19 20:12:27 -04:00
Ricardo Wurmus
d2485dde5b
gnu: r-enrichplot: Update to 1.18.4. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.18.4.
 2023-04-19 20:12:27 -04:00
Ricardo Wurmus
6d10745d6b
gnu: r-structuralvariantannotation: Update to 1.14.1. 
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.14.1.
 2023-04-19 20:12:27 -04:00
Ricardo Wurmus
ec37e00e90
gnu: r-rhdf5: Update to 2.42.1. 
* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.42.1.
 2023-04-19 20:12:27 -04:00
Efraim Flashner
610979ed3a
gnu: openmw-scenegraph: Fix build. 
* gnu/packages/graphics.scm (openmw-scenegraph)[outputs]: Only use 'out'
output.
[arguments]: Delete inherited 'copy-plugins phase.
 2023-04-19 20:12:27 -04:00
Efraim Flashner
5832699aea
gnu: repo2docker: Add missing inputs. 
* gnu/packages/jupyter.scm (repo2docker)[inputs]: Add python-iso8601,
python-chardet.
 2023-04-19 20:12:26 -04:00
Efraim Flashner
61ad934d90
gnu: kwin: Update skipped test list. 
* gnu/packages/kde-plasma.scm (kwin)[arguments]: Update custom 'check
phase with new list of skipped tests.
 2023-04-19 20:12:26 -04:00
Efraim Flashner
83cef4a4f1
gnu: kwin: Rewrite skipped tests to be more readable. 
* gnu/packages/kde-plasma.scm (kwin)[arguments]: Rewrite skipped tests
in custom 'check phase to be easier to read.
 2023-04-19 20:12:26 -04:00
Nicolas Goaziou
9cc7ff179d
gnu: emacs-osm: Do not mix home-page and origin. 
* gnu/packages/emacs-xyz.scm (emacs-osm)[source]<origin>: Do not use home-page
value as origin.
 2023-04-19 20:12:26 -04:00
Nicolas Goaziou
ae1f9b9c92
gnu: emacs-osm: Update to 0.11. 
* gnu/packages/emacs-xyz.scm (emacs-osm): Update to 0.11.
 2023-04-19 20:12:26 -04:00
Nicolas Goaziou
d02b17534a
gnu: emacs-marginalia: Update to 1.2. 
* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 1.2.
 2023-04-19 20:12:25 -04:00
Nicolas Goaziou
2f1b156d04
gnu: emacs-envrc: Add DIRENV as an input. 
* gnu/packages/emacs-xyz.scm (emacs-envrc)[arguments]<#:phases>: Set direnv
executable location.
<#:tests?, #:test-command>: Tentatively run tests, without success.  At least,
they do not complain "direnv" executable is nowhere to be found.
[inputs]: Add DIRENV.
 2023-04-19 20:12:25 -04:00
Nicolas Goaziou
e870caa018
gnu: emacs-envrc: Update to 0.5. 
* gnu/packages/emacs-xyz.scm (emacs-envrc): Update to 0.5.
 2023-04-19 20:12:25 -04:00
Nicolas Goaziou
6dc90a7a6f
gnu: emacs-cape: Update to 0.15. 
* gnu/packages/emacs-xyz.scm (emacs-cape): Update to 0.15.
 2023-04-19 20:12:24 -04:00
Nicolas Goaziou
3c0a466170
gnu: emacs-autothemer: Run tests. 
* gnu/packages/emacs-xyz.scm (emacs-autothemer)[arguments]: Run tests.
 2023-04-19 20:12:24 -04:00
Nicolas Goaziou
38b2122afb
gnu: emacs-autothemer: Update to 0.2.17. 
* gnu/packages/emacs-xyz.scm (emacs-autothemer): Update to 0.2.17.
 2023-04-19 20:12:24 -04:00
Matthieu Lemerre
79d5721a03
gnu: Add texlive-totpages. 
* gnu/packages/tex.scm (texlive-totpages): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2023-04-19 20:12:23 -04:00
Nicolas Goaziou
919a08b3d5
gnu: texlive-latex-lastpage: Replace with texlive-lastpage. 
* gnu/packages/tex.scm (texlive-lastpage): New variable.
(texlive-latex-lastpage): Deprecate variable.
 2023-04-19 20:12:23 -04:00
Nicolas Goaziou
f6fa6772e9
gnu: texlive-latex-totcount: Replace with texlive-totcount. 
* gnu/packages/tex.scm (texlive-totcount): New variable.
(texlive-latex-totcount): Deprecate package.
 2023-04-19 20:12:23 -04:00
Nicolas Goaziou
7644e4c090
gnu: texlive-latex-acronym: Replace with texlive-acronym. 
* gnu/packages/tex.scm (texlive-latex-acronym): Deprecate package.
(texlive-acronym): New variable.
 2023-04-19 20:12:23 -04:00
Nicolas Goaziou
e59ce41bf2
gnu: texlive-latex-bigfoot: Replace with texlive-bigfoot. 
* gnu/packages/tex.scm (texlive-bigfoot): New variable.
(texlive-latex-bigfoot): Deprecate package.
(texlive-pstool): Use new variable.
 2023-04-19 20:12:22 -04:00
Nicolas Goaziou
0c7e7e42e6
gnu: Add texlive-relsize. 
* gnu/packages/tex.scm (texlive-relsize): New variable.
 2023-04-19 20:12:22 -04:00
Nicolas Goaziou
0c50d0bda1
gnu: Add texlive-ncctools. 
* gnu/packages/tex.scm (texlive-ncctools): New variable.
 2023-04-19 20:12:22 -04:00
Ricardo Wurmus
8ed911cb25
gnu: r-with-tests: Update to 4.2.3. 
* gnu/packages/statistics.scm (r-with-tests): Update to 4.2.3.
 2023-04-19 20:12:22 -04:00
Nicolas Graves
7cb21556b6
snippets: tempel: Simplify git-commit-mode detection. 
* etc/snippets/tempel/text-mode: Simplify git-commit-mode detection.

Signed-off-by: Andrew Tropin <andrew@trop.in>
 2023-04-19 20:12:22 -04:00
Liliana Marie Prikler
e7550b8d93
gnu: emacs-next: Update to 29.0.90. 
* gnu/packages/emacs.scm (emacs-next): Update to 29.0.90.
 2023-04-19 20:12:21 -04:00
Maxim Cournoyer
e8e62d8bf2
gnu: qemu: Update to 7.2.1. 
* gnu/packages/virtualization.scm (qemu): Update to 7.2.1.
 2023-04-19 20:12:21 -04:00
Maxim Cournoyer
c4c048032b
gnu: audacity: Update to 3.3.0-beta-1. 
* gnu/packages/audio.scm (audacity): Update to 3.3.0-beta-1.
[source]: Delete trailing #t in snippet.
[arguments]: Update fix-cmake-rpath phase.

Reported-by: tschilptschilp23 on #guix.
 2023-04-19 20:12:21 -04:00
TakeV
a7dd463baa
gnu: remmina: Update to 1.4.29. 
* gnu/packages/vnc.scm (remmina): Update to 1.4.29.
[inputs]: Add PYTHON-MINIMAL-WRAPPER.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2023-04-19 20:12:21 -04:00
Bruno Victal
05b22726ea
gnu: usbutils: Use G-Expressions. 
* gnu/packages/linux.scm (usbutils): Use G-Expressions.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-04-19 20:12:21 -04:00
mikadoZero
d89e642e84
gnu: usbutils: Make package description different from synopsis. 
* gnu/packages/linux.scm (usbutils)[description]:  Change package description.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-04-19 20:12:20 -04:00
Saku Laesvuori
88a59bb929
gnu: Add kitsas. 
* gnu/packages/finance.scm (kitsas): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2023-04-19 20:12:20 -04:00
Ludovic Courtès
6d6add5f8f
ssh: Silence remote daemon messages when sending store items. 
Fixes <https://issues.guix.gnu.org/61839>.

Previously, when running 'guix-daemon --debug' on the remote machine,
lots of debugging outputs would be printed to stderr; since the client
wouldn't read it, we could eventually reach a deadlock where the 'guix
repl' process would be stuck writing to stderr while the client is
stuck waiting on its stdout.

* guix/ssh.scm (store-import-channel)[import]: Parameterize
'current-build-output-port'.
 2023-04-19 20:12:20 -04:00
Ludovic Courtès
e95e65541a
substitute: Download nar from another server upon ETIMEDOUT. 
Previously, 'guix substitute' would fail abruptly with something like:

  guix substitute: warning: while fetching https://ci.guix.gnu.org/nar/lzip/…-example: server is somewhat slow
  guix substitute: warning: try `--no-substitutes' if the problem persists
  guix substitute: error: connect*: Connection timed out
  substitution of /gnu/store/…-example failed

* guix/scripts/substitute.scm (network-error?): Add ETIMEDOUT.
 2023-04-19 20:12:20 -04:00
Ludovic Courtès
2886a59d18
services: agetty: 'term-console' succeeds by default. 
Previously, on a typical setup without "console=ttyS0" or similar in
'kernel-arguments', the 'term-console' Shepherd service would always be
marked as failing to start.  This is undesirable because it raises a
false alarm: the service is expected to do nothing in this case.

This patch instead marks it as succeeding and logs a message explaining
it's doing nothing.

* gnu/services/base.scm (agetty-shepherd-service): In 'start' method,
succeed when TTY is #f and print a message.
 2023-04-19 20:12:20 -04:00
Ludovic Courtès
abdf812acc
environment: Really auto-load (guix scripts pack). 
Fixes a performance regression on cache hits introduced in
b31ea797ed, whereby (guix scripts pack)
would be loaded eagerly during startup, leading hundreds of (gnu
packages *) modules to be loaded.

Fixes <https://issues.guix.gnu.org/62899>.

* guix/scripts/environment.scm: Autoload (gnu build install).
(%options): Add indirection when calling 'symlink-spec-option-parser' so
that (guix scripts pack) is auto-loaded only when needed.
 2023-04-19 20:12:19 -04:00
Nicolas Goaziou
72096b7330
gnu: Add converseen. 
* gnu/packages/image.scm (converseen): New variable.
* gnu/packages/patches/converseen-hide-non-free-pointers.patch:
* gnu/packages/patches/converseen-hide-updates-checks.patch: New files.
* gnu/local.mk: Register files above.
 2023-04-19 20:12:19 -04:00
Maxim Cournoyer
e10e277f7a
gnu: python-anyio: Update to 3.6.2. 
* gnu/packages/python-xyz.scm (python-anyio): Update to 3.6.2.
 2023-04-19 20:12:19 -04:00
Maxim Cournoyer
dd375f7075
gnu: font-meera-inimai: Use gexps and remove labels. 
* gnu/packages/fonts.scm (font-meera-inimai) [native-inputs]: Remove labels.
[arguments]: Use gexps.
 2023-04-19 20:12:19 -04:00
Maxim Cournoyer
af015334d1
gnu: python-fonttools-full: Rename to python-fonttools. 
* gnu/packages/python-xyz.scm (python-fonttools): Rename to...
(python-fonttools-minimal): ... this.
(python-fonttools-full): Adjust references to base package.  Rename to...
(python-fonttools): ... this.
(python-matplotlib):
* gnu/packages/fontutils.scm (python-cu2qu) [propagated-inputs]: Rename
python-fonttools-full to python-fonttools.
(python-ufolib2, python-defcon-bootstrap): Likewise.
* gnu/packages/pdf.scm (weasyprint): Likewise.
* gnu/packages/fonts.scm (font-meera-inimai) Adjust for renamed
python-fonttools-minimal.
* gnu/packages/fontutils.scm (python-cffsubr): Likewise.
(python-compreffor, python-cu2qu, python-fontmath, python-fontpens-bootstrap)
(python-fontparts-bootstrap, python-glyphsets, python-mutatormath)
(python-ufoprocessor, graphite2, python-ufolib2)
(python-defcon-bootstrap): Likewise.
* gnu/packages/graphics.scm (python-booleanoperations): Likewise.
 2023-04-19 20:12:18 -04:00
Maxim Cournoyer
00a328847a
gnu: python-fonttools: Update to 4.39.3. 
This should have been already merged but was left out in a conflict
resolution.

* gnu/packages/python-xyz.scm (python-fonttools): Update to 4.39.3.
 2023-04-19 20:12:18 -04:00
Maxim Cournoyer
798d91df26
gnu: python-scikit-build: Update to 0.17.1. 
* gnu/packages/python-xyz.scm (python-scikit-build): Update to 0.17.1.
[source]: Update URI.
[arguments]: Update check phase override.
[native-inputs]: Add python-hatchling, python-hatch-fancy-pypi-readme and
python-hatch-vcs.
[propagated-inputs]: Add python-tomli.
 2023-04-19 20:12:18 -04:00