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Author SHA1 Message Date
Efraim Flashner
49fe965d28
gnu: criu: Fix building on armhf-linux. 
* gnu/packages/virtualization.scm (criu)[arguments]: Hardcode the arm
version in the Makefile.
 2019-01-08 12:29:40 +02:00
Clément Lassieur
b509381089
gnu: gajim-omemo: Update to 2.6.26. 
* gnu/packages/messaging.scm (gajim-omemo): Update to 2.6.26.
 2019-01-08 10:19:55 +01:00
Clément Lassieur
5cfec72f39
gnu: gajim: Update to 1.1.1. 
* gnu/packages/messaging.scm (gajim): Update to 1.1.1.
[arguments]: Replace #:test-target with a 'check' phase.
 2019-01-08 10:19:55 +01:00
Tobias Geerinckx-Rice
eac5d425cd
gnu: tor: Update to 0.3.4.10. 
* gnu/packages/tor.scm (tor): Update to 0.3.4.10.
 2019-01-08 04:21:53 +01:00
Tobias Geerinckx-Rice
be4f8391a4
gnu: privoxy: Update to 3.0.28. 
* gnu/packages/tor.scm (privoxy): Update to 3.0.28.
 2019-01-08 04:21:52 +01:00
Rutger Helling
3c85058c0e
gnu: libnet: Update to 1.2-rc3. 
* gnu/packages/networking.scm (libnet): Update to 1.2-rc3.
[source]: Use git-fetch.
 2019-01-07 22:07:01 +01:00
Julien Lepiller
8737666a99
gnu: ocaml-graph: Add upstream-name. 
* gnu/packages/ocaml.scm (ocaml-graph)[properties]: Add upstream-name.
 2019-01-07 22:05:47 +01:00
Julien Lepiller
33af92dd99
gnu: Move coq packages from ocaml to coq. 
* gnu/packages/ocaml.scm (coq, proof-general, coq-flocq, coq-gappa, coq-mathcomp)
(coq-coquelicot, coq-bignums, coq-interval): Move from here...
* gnu/packages/coq.scm: ... to here.  New file.
 2019-01-07 22:05:37 +01:00
Alex Kost
912f0541a3
gnu: emacs-guix: Update to 0.5.1.1. 
* gnu/packages/emacs.scm (emacs-guix): Update to 0.5.1.1.
 2019-01-07 22:52:46 +03:00
Danny Milosavljevic
40c7476af8
gnu: containerd: Update synopsis. 
* gnu/packages/docker.scm (containerd)[synopsis]: Modify.
 2019-01-07 19:13:04 +01:00
Danny Milosavljevic
54891e850a
gnu: containerd: Enable tests. 
* gnu/packages/docker.scm (containerd)[arguments]: Remove #:tests?.
 2019-01-07 19:12:14 +01:00
Ricardo Wurmus
1f1e338ad4
gnu: Add missing use-module clause. 
This is a follow-up to 4e5b8f7215.

* gnu/packages/docker.scm: Add missing use-module clause.
 2019-01-07 18:45:23 +01:00
Ricardo Wurmus
d53b23176f
gnu: Add r-corpcor. 
* gnu/packages/cran.scm (r-corpcor): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
e3bb076678
gnu: Add r-ddrtree. 
* gnu/packages/cran.scm (r-ddrtree): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
9f33d76c33
gnu: Add r-qlcmatrix. 
* gnu/packages/cran.scm (r-qlcmatrix): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
58bc8857fb
gnu: Add r-combinat. 
* gnu/packages/cran.scm (r-combinat): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
13f5837b4c
gnu: Add r-densityclust. 
* gnu/packages/cran.scm (r-densityclust): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
b614009e6a
gnu: Add r-sparsesvd. 
* gnu/packages/cran.scm (r-sparsesvd): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
fbebccf7f6
gnu: Add r-docopt. 
* gnu/packages/cran.scm (r-docopt): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
45b469a472
gnu: Add r-rvcheck. 
* gnu/packages/cran.scm (r-rvcheck): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
61d7334906
gnu: Add r-tidytree. 
* gnu/packages/cran.scm (r-tidytree): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
a6e4413d64
gnu: Add r-colorramps. 
* gnu/packages/cran.scm (r-colorramps): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
e37935e457
gnu: Add r-wordcloud. 
* gnu/packages/cran.scm (r-wordcloud): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
f3949fecb3
gnu: Add r-waveslim. 
* gnu/packages/cran.scm (r-waveslim): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
db084d79ea
gnu: Add r-tiff. 
* gnu/packages/cran.scm (r-tiff): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
44b0c5b5b1
gnu: Add r-fftwtools. 
* gnu/packages/cran.scm (r-fftwtools): New variable.
 2019-01-07 18:44:03 +01:00
Ricardo Wurmus
71601a5d92
gnu: Add r-softimpute. 
* gnu/packages/cran.scm (r-softimpute): New variable.
 2019-01-07 18:44:03 +01:00
Ricardo Wurmus
03a3ec5e18
gnu: Add r-adgoftest. 
* gnu/packages/cran.scm (r-adgoftest): New variable.
 2019-01-07 18:44:03 +01:00
Ricardo Wurmus
a50abb3614
gnu: Add r-gsl. 
* gnu/packages/cran.scm (r-gsl): New variable.
 2019-01-07 18:44:03 +01:00
Ricardo Wurmus
ced51a204e
gnu: Add r-stabledist. 
* gnu/packages/cran.scm (r-stabledist): New variable.
 2019-01-07 18:44:03 +01:00
Efraim Flashner
dcd1aa2e64
gnu: perl-lingua-translit: Update to 0.28. 
* gnu/packages/perl.scm (perl-lingua-translit): Update to 0.28.
 2019-01-07 19:42:41 +02:00
Danny Milosavljevic
4e5b8f7215
gnu: Add containerd. 
* gnu/packages/docker.scm (containerd): New variable.
 2019-01-07 16:41:17 +01:00
Danny Milosavljevic
7f2d67c826
gnu: Add dummy linker for arm-elf. 
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add case for arm-elf.
 2019-01-07 16:39:35 +01:00
Ricardo Wurmus
2a2760a08f
gnu: Move R packages from geo.scm to cran.scm. 
* gnu/packages/geo.scm (r-maps, r-mapproj, r-rgooglemaps, r-geosphere,
r-ggmap): Move from here...
* gnu/packages/cran.scm: ...to here.
 2019-01-07 15:55:06 +01:00
Ricardo Wurmus
576e74eee8
gnu: emacs-ess: Move to (gnu packages statistics). 
* gnu/packages/emacs.scm (emacs-ess): Move from here...
* gnu/packages/statistics.scm (emacs-ess): ...to here.
 2019-01-07 15:55:06 +01:00
Ricardo Wurmus
61f2587db9
gnu: python-rpy2: Move to (gnu packages statistics). 
* gnu/packages/python.scm (python-rpy2): Move from here...
* gnu/packages/statistics.scm (python-rpy2): ...to here.
 2019-01-07 15:55:06 +01:00
Ricardo Wurmus
e0d3f4bf1a
gnu: Remove reference to (gnu packages statistics). 
* gnu/packages/web.scm: Remove obsolete use-module clause.
 2019-01-07 15:55:06 +01:00
Ricardo Wurmus
d9bec9a87b
gnu: r-rmysql: Move from databases.scm to cran.scm 
* gnu/packages/databases.scm (r-rmysql): Move from here...
* gnu/packages/cran.scm (r-rmysql): ...to here.
 2019-01-07 15:55:06 +01:00
Jelle Licht
41a010875b
gnu: biber: Update to 2.12. 
* gnu/packages/tex.scm (biber): Update to 2.12.
[source]: Use 'git-fetch'. Add patch.
[inputs]: Add perl-file-slurper. Remove perl-file-slurp.
* gnu/packages/patches/biber-fix-encoding-write.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-01-07 15:40:58 +01:00
Ricardo Wurmus
60a166c629
gnu: r-feather: Move from serialization.scm to cran.scm. 
* gnu/packages/serialization.scm (r-feather): Move from here...
* gnu/packages/cran.scm (r-feather): ...to here.
 2019-01-07 15:21:09 +01:00
Ludovic Courtès
67eebb19b7
gnu: Fix top-level circular references between emacs.scm and llvm.scm. 
Previously, loading either of these two modules could fail somewhat
non-deterministically because each top-level was referencing a variable
defined by the other module's top-level.

* gnu/packages/emacs.scm (package-elisp-from-package): Move to...
* gnu/packages/llvm.scm (package-elisp-from-package): Here.  Keep
private.
 2019-01-07 15:09:30 +01:00
Jelle Licht
37e461e6f4
gnu: perl-file-slurper: Update to 0.012. 
* gnu/packages/perl.scm (perl-file-slurper): Update to 0.012.
[native-inputs]: Add perl-test-warnings.
 2019-01-07 15:08:08 +01:00
Ricardo Wurmus
92ce188331
gnu: Move R packages from web.scm to cran.scm. 
* gnu/packages/web.scm (r-httpuv, r-jsonlite, r-servr, r-htmltools,
r-htmlwidgets, r-htmltable, r-curl, r-hwriter, r-rjson, r-shiny,
r-shinydashboard, r-shinyfiles, r-crosstalk, r-rook, r-miniui): Move these
from here...
* gnu/packages/cran.scm: ...to here.
 2019-01-07 15:05:27 +01:00
Pierre Neidhardt
3a3d4d9d54
Revert "gnu: Use package-elisp-from-package for clangs emacs lisp files" 
This reverts commit 5bc2e14add.
 2019-01-07 14:58:40 +01:00
Efraim Flashner
6fd2ed23ac
gnu: mantis: Limit to x86_64-linux. 
* gnu/packages/bioinformatics.scm (mantis)[supported-systems]: New field.
 2019-01-07 15:47:34 +02:00
Pierre Neidhardt
e97b23e4bd
gnu: package-elisp-from-package: Clarify docstring. 
* gnu/packages/emacs.scm (package-elisp-from-package)[docstring]: Clarify.
 2019-01-07 14:45:21 +01:00
Tim Gesthuizen
5bc2e14add
gnu: Use package-elisp-from-package for clangs emacs lisp files 
Use package-elisp-from-package for emacs-clang-format and emacs-clang-rename.
Also remove package-from-clang-elisp-file as it is not needed anymore.

* gnu/packages/llvm.scm (emacs-clang-format): Use package-elisp-from-package
* gnu/packages/llvm.scm (emacs-clang-rename): Use package-elisp-from-package
* gnu/packages/llvm.scm (package-from-clang-elisp-file): Remove function
 2019-01-07 14:45:21 +01:00
Tim Gesthuizen
7d5856bd45
gnu: Add package-elisp-from-package 
Add a function to generate package definitions that packages single elisp
files from other packages.

* gnu/packages/emacs.scm (package-elisp-from-package): New function
 2019-01-07 14:45:21 +01:00
Ludovic Courtès
915c6bf60c
gnu: python2-fastlmm: Move to machine-learning.scm. 
This is a step towards removing OCaml modules from the closure
of (gnu packages python).

* gnu/packages/python.scm (python2-fastlmm): Move to...
* gnu/packages/machine-learning.scm (python2-fastlmm): ... here.
 2019-01-07 14:41:01 +01:00
Ludovic Courtès
6fd5a80dbe
gnu: Remove unnecessary build-side module imports. 
* gnu/packages/batik.scm, gnu/packages/boost.scm,
gnu/packages/calendar.scm, gnu/packages/gl.scm,
gnu/packages/lua.scm, gnu/packages/qt.scm, gnu/packages/simulation.scm,
gnu/packages/terminals.scm: Remove unnecessary import of (guix build
utils).
* gnu/packages/emacs.scm: Remove unnecessary imports of (guix ...).
* gnu/packages/libcanberra.scm: Use (srfi srfi-1) instead of (guix build
utils) for 'alist-delete'.
* gnu/packages/wxwidgets.scm: Likewise.
 2019-01-07 14:41:00 +01:00