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Author SHA1 Message Date
Leo Famulari
60f3ad8c07
gnu: gnu-make: Don't replace 'sh' reference with 'bash'. 
* gnu/packages/base.scm (gnu-make)[arguments]: Use /bin/sh instead of /bin/bash
in 'set-default-shell' phase.
 2017-01-06 17:16:02 -05:00
Leo Famulari
fa6428a19f
gnu: m4: Don't replace 'sh' reference with 'bash'. 
* gnu/packages/m4.scm (m4)[arguments]: Use /bin/sh instead of /bin/bash in
'pre-check' phase.
 2017-01-06 17:16:02 -05:00
Leo Famulari
74288230ea
Merge branch 'master' into core-updates 2017-01-06 17:14:41 -05:00
Leo Famulari
aa21c764d6
gnu: python-pycrypto: Fix CVE-2013-7459. 
* gnu/packages/patches/python-pycrypto-CVE-2013-7459.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pycrypto, python2-pycrypto)[source]: Use the
patch. Use pypi-uri.
 2017-01-06 13:50:18 -05:00
Leo Famulari
707c65aad7
gnu: nspr: Update to 4.13.1. 
* gnu/packages/gnuzilla.scm (nspr): Update to 4.13.1.
 2017-01-06 13:09:05 -05:00
Ricardo Wurmus
3a3bf2f819
gnu: Add r-copywriter. 
* gnu/packages/bioinformatics.scm (r-copywriter): New variable.
 2017-01-06 16:31:19 +01:00
Ricardo Wurmus
d407bdb931
gnu: Add r-copyhelper. 
* gnu/packages/bioinformatics.scm (r-copyhelper): New variable.
 2017-01-06 16:31:14 +01:00
Ricardo Wurmus
6193563a36
gnu: Add r-chipseq. 
* gnu/packages/bioinformatics.scm (r-chipseq): New variable.
 2017-01-06 16:31:02 +01:00
David Craven
974e02da76
file-systems: Refactor file system detection logic. 
* gnu/build/file-systems.scm (read-superblock,
  null-terminated-latin1->string): New variables.
  (sub-bytevector): Move to general section.
  (ext2-superblock?, read-ext2-superblock): New variables.
  (ext2-superblock-uuid, ext2-superblock-volume-name): Use
  sub-bytevector and null-terminated-latin1->string.
  (%ext2-sblock-magic, %ext2-sblock-creator-os, %ext2-sblock-uuid,
  %ext2-sblock-volume-name): Inline constants.
  (luks-superblock?, read-luks-header): New variables.
  (%luks-header-size, %luks-magic): Inline.
  (partition-label-predicate, partition-uuid-predicate,
  luks-partition-uuid-predicate): Use new functions.
 2017-01-06 15:06:42 +01:00
Christopher Baines
fab2784dbb
gnu: gnome-tweak-tool: Add missing inputs. 
* gnu/packages/gnome.scm (gnome-tweak-tool)[inputs]: Add gnome-desktop
and libsoup.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-06 10:23:27 +01:00
Christopher Baines
adb41527ad
gnu: gnome-tweak-tool: Make propagated-inputs just inputs. 
* gnu/packages/gnome.scm (gnome-tweak-tool)[propagated-inputs]: Merge
with...
[inputs]: ... this.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-06 10:23:27 +01:00
Christopher Baines
9af6bce1e1
gnu: gnome-tweak-tool: Wrap program to set 'GI_TYPELIB_PATH'. 
* gnu/packages/gnome.scm (gnome-tweak-tool)[arguments]: Add
'wrap-program' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-06 10:23:27 +01:00
Christopher Baines
7ef335b0e8
gnu: gnome-tweak-tool: Use glib-or-gtk-build-system. 
This allows gobject introspection namespaces to be found.

* gnu/packages/gnome.scm (gnome-tweak-tool)[build-system]: Set to
GLIB-OR-GTK-BUILD-SYSTEM.
[arguments]: Use %GLIB-OR-GTK-BUILD-SYSTEM-MODULES in #:imported-modules.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-06 10:23:27 +01:00
Ben J Woodcroft
dbf9d37114
gnu: bioruby: Update to 1.5.1. 
* gnu/packages/bioinformatics.scm (bioruby): Update to 1.5.1.
 2017-01-06 19:06:07 +10:00
Ben J Woodcroft
0c37e2a3d2
gnu: cd-hit: Update to 4.6.6. 
* gnu/packages/bioinformatics.scm (cd-hit): Update to 4.6.6.
 2017-01-06 19:06:03 +10:00
Leo Famulari
e50d5b8c9d
gnu: khal: Disable failing tests. 
* gnu/packages/patches/khal-disable-failing-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/calendar.scm (khal): Use it.
 2017-01-06 03:19:40 -05:00
Leo Famulari
e0c32fc817
gnu: vdirsyncer: Update to 0.14.1. 
* gnu/packages/dav.scm (vdirsyncer): Update to 0.14.1.
 2017-01-06 03:19:40 -05:00
Leo Famulari
491b78a8e8
gnu: python-icalendar: Update to 3.11.1. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.1.
 2017-01-06 03:19:36 -05:00
Ludovic Courtès
fbec5abeef
gnu: gv: Do not propagate Ghostscript. 
* gnu/packages/gv.scm (gv)[propagated-inputs]: Remove.
[arguments]: New field.
[inputs]: Add GHOSTCRIPT/X.
 2017-01-05 23:45:38 +01:00
Alex Kost
ec14d2157d
gnu: emacs-smartparens: Update to 1.9.0. 
* gnu/packages/emacs.scm (emacs-smartparens): Update to 1.9.0.
 2017-01-06 00:31:03 +03:00
Alex Kost
922ab34446
gnu: magit: Update to 2.10.0. 
* gnu/packages/emacs.scm (magit, emacs-magit-popup): Update to 2.10.0.
 2017-01-06 00:29:23 +03:00
Alex Kost
cfb9026aa5
gnu: emacs-with-editor: Update to 2.5.9. 
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.5.9.
 2017-01-06 00:29:23 +03:00
Danny Milosavljevic
6c8a387af2
gnu: Add ghc-markdown-unlit. 
* gnu/packages/haskell.scm (ghc-markdown-unlit): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 18:47:40 +01:00
Tobias Geerinckx-Rice
12c15242f4
gnu: beep: Ignore substitute* return value. 
* gnu/packages/terminals.scm (beep)[arguments]: End 'patch-makefile phase
with truth.
 2017-01-05 17:40:54 +01:00
Leo Famulari
92e779592d
gnu: libtool: Correct replacement shebang. 
* gnu/packages/autotools.scm (libtool)[arguments]: Correct replacement
shebang in 'restore-ltmain-shebang' phase.
 2017-01-05 11:32:44 -05:00
David Thompson
543bd0eede
gnu: sdl2: Add fcitx input. 
* gnu/packages/sdl.scm (sdl2)[inputs]: Add fcitx.
 2017-01-05 11:27:10 -05:00
David Thompson
e0101b54b7
gnu: sdl2: Fix double input events bug. 
* gnu/packages/sdl.scm (sdl2)[inputs]: Add dbus, gblib, and ibus.
 2017-01-05 11:22:32 -05:00
Leo Famulari
f537ad0bf3
Revert "gnu: gawk: Don't replace 'sh' reference with 'bash'." 
This commit causes too many rebuilds. It will be re-committed to core-updates.

This reverts commit 5b2834ae79.
 2017-01-05 11:22:07 -05:00
Leo Famulari
5b2834ae79
gnu: gawk: Don't replace 'sh' reference with 'bash'. 
* gnu/packages/gawk.scm (gawk)[arguments]: Use /bin/sh instead of /bin/bash in
'set-shell-file-name' phase.
 2017-01-05 11:06:06 -05:00
Leo Famulari
78c172a56e
gnu: libtool: Make sure all phases return a successful value. 
* gnu/packages/autotools.scm (libtool)[arguments]: Return #t from 'pre-check'
and 'restore-ltmain-shebang' phases.
 2017-01-05 10:46:34 -05:00
Marius Bakke
d9d23101ce
gnu: irssi: Update to 1.0.0. 
* gnu/packages/irc.scm (irssi): Update to 1.0.0.
[arguments]: Remove --with-ncurses configure flag.
[native-inputs]: Move 'perl' to ...
[inputs]: ... here.
[home-page]: Use HTTPS.
 2017-01-05 16:44:34 +01:00
Leo Famulari
c5862bda95
gnu: libtool: Don't replace 'sh' reference with 'bash'. 
Bash behaves differently based on how it is invoked (see Invocation in bash(1)).

* gnu/packages/autotools.scm (libtool)[arguments]: Use /bin/sh instead
of /bin/bash in 'pre-check' phase. Fix typo in comment.
 2017-01-05 10:43:17 -05:00
ng0
98341757c8
gnu: libtool: Restore ltmain.sh shebang. 
This fixes <http://bugs.gnu.org/25304>

* gnu/packages/autotools.scm (libtool)[arguments]: Add new phase
'restore-ltmain-shebang'.
[native-inputs]: Add help2man.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-05 10:43:17 -05:00
ng0
dc70626d26
gnu: libtool: Use 'modify-phases'. 
* gnu/packages/autotools.scm (libtool): Use 'modify-phases'.
[arguments]: Use 'modify-phases'.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-05 10:43:14 -05:00
Marius Bakke
1bd858cc14
gnu: Fix indentation of some python packages. 
This is a followup to abe2ec73..807a5b32.

* gnu/packages/python.scm (python-snowballstemmer,
  python-sphinx-cloud-sptheme, python-sphinx-alabaster-theme): Fix indentation.
 2017-01-05 16:28:01 +01:00
Danny Milosavljevic
807a5b32bf
gnu: Add python-sphinx-alabaster-theme. 
* gnu/packages/python.scm (python-sphinx-alabaster-theme,
  python2-sphinx-alabaster-theme): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 16:17:27 +01:00
Danny Milosavljevic
754bfd7019
gnu: Add python-sphinx-cloud-sptheme. 
* gnu/packages/python.scm (python-sphinx-cloud-sptheme,
  python2-sphinx-cloud-sptheme): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 16:17:27 +01:00
Danny Milosavljevic
89cd988b6c
gnu: Add python-snowballstemmer. 
* gnu/packages/python.scm (python-snowballstemmer,
  python2-snowballstemmer): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 16:17:26 +01:00
Marius Bakke
7d7ea947f5
gnu: sed: Update to 4.3. 
* gnu/packages/base.scm (sed): Update to 4.3.
[source]: Use xz tarball. Remove upstreamed patch.
[arguments]: Fix '/bin/sh' -> 'bash' substitution.
[home-page]: Use https.
[native-inputs]: Add perl.
* gnu/packages/patches/sed-hurd-path-max.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-05 15:21:23 +01:00
José Miguel Sánchez García
abe2ec735f
gnu: Add beep. 
* gnu/packages/terminals.scm (beep): New variable.

Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-01-05 13:09:19 +01:00
Tobias Geerinckx-Rice
88a46c9812
gnu: Remove unused module import from (gnu packages mtools). 
This is a follow-up to commit 3b0f2ba46b.

* gnu/packages/mtools.scm: Remove import of (gnu packages python).
 2017-01-05 13:09:19 +01:00
Ben Woodcroft
19e5fb6030
gnu: ruby-nokogiri: Update to 1.7.0.1. 
* gnu/packages/ruby.scm (ruby-nokogiri): Update to 1.7.0.1.
 2017-01-05 21:00:51 +10:00
Ben Woodcroft
8e941f2068
gnu: ruby-hoe: Update to 3.16.0. 
* gnu/packages/ruby.scm (ruby-hoe): Update to 3.16.0.
 2017-01-05 20:52:22 +10:00
Carlos Sánchez de La Lama
4a6f099e2c
gnu: bootstrap: Add the dynamic linker name for "powerpc-linux". 
This commit completes cross-compilation support for powerpc-linux-gnu.

* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add "powerpc-linux"
case.
 2017-01-04 23:57:30 +01:00
Carlos Sánchez de La Lama
440a3143f0
gnu: linux-libre: Adjust for PowerPC. 
* gnu/packages/linux.scm (system->defconfig): New procedure.
(linux-libre-headers)[arguments]: Use it in 'build' phase to determine
the target name.
* gnu/packages/cross-base.scm (cross-kernel-headers)[xlinux-headers]
(arguments): Likewise.
 2017-01-04 23:57:05 +01:00
Carlos Sánchez de La Lama
fc649d0aad
gnu: gcc: Adjust for PowerPC. 
* gnu/packages/gcc.scm (gcc-4.7)[arguments]: Add powerpc specific
substitutions for dynamic linker and start files locations in
'pre-configure' phase.
* gnu/packages/make-bootstrap.scm (%gcc-static)[arguments]: Add
"gcc/config/rs6000/sysv4.h" to the list of files in 'remove-lgcc_s'
phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-04 23:55:36 +01:00
Leo Famulari
5f0fabec54
gnu: unrtf: Fix CVE-2016-10091. 
* gnu/packages/patches/unrtf-CVE-2016-10091.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/unrtf.scm (unrtf)[source]: Use it.
 2017-01-04 14:42:58 -05:00
Alex Griffin
7a203059d3
gnu: libreoffice: Update to 5.1.6.2. 
* gnu/packages/libreoffice.scm (libreoffice): Update to 5.1.6.2.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-04 14:37:58 -05:00
David Craven
3dcaa1226d
gnu: ocamlmod: Enable tests. 
Followup to 93eeadf022.

* gnu/packages/ocaml.scm (ocamlmod)[arguments]: Enable tests.

Problem reported by Julien Lepiller <julien@lepiller.eu>.
 2017-01-04 19:10:01 +01:00
David Craven
337273e41f
gnu: ocaml-ounit: Enable tests. 
Followup to 7a76b4afd0.

* gnu/packages/ocaml.scm (ocaml-ounit)[arguments]: Enable tests.

Problem reported by Julien Lepiller <julien@lepiller.eu>.
 2017-01-04 19:10:00 +01:00