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131375 commits

Author SHA1 Message Date
Ricardo Wurmus
63622bf34e
gnu: r-edger: Update to 4.0.16.
* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.16.

Change-Id: I542bbe7f290a5282f76eea7b88f605f6fa714624
2024-02-26 13:03:12 +01:00
Ricardo Wurmus
52c373f107
gnu: r-anf: Update to 1.24.1.
* gnu/packages/bioconductor.scm (r-anf): Update to 1.24.1.

Change-Id: I5843d257e4312101fb1b0dc9bbb49bd088bb3b91
2024-02-26 13:03:12 +01:00
Ricardo Wurmus
866fbcc629
gnu: r-anvil: Update to 1.14.2.
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.14.2.

Change-Id: I91fa1253e5f174d9d1d445edd873ceb23a783787
2024-02-26 13:03:11 +01:00
Ricardo Wurmus
1d85f921f6
gnu: r-mclust: Update to 6.1.
* gnu/packages/statistics.scm (r-mclust): Update to 6.1.

Change-Id: I52a5bd83b26e0d1d35e494e6dab1e6dec594fdfc
2024-02-26 12:34:11 +01:00
Ricardo Wurmus
13fc90e284
gnu: r-runit: Update to 0.4.33.
* gnu/packages/statistics.scm (r-runit): Update to 0.4.33.

Change-Id: I0690643ff91f9ec7e41d1dba68d23eae1d981d8b
2024-02-26 12:34:11 +01:00
Ricardo Wurmus
fe9bdd7ef7
gnu: r-gdtools: Update to 0.3.6.
* gnu/packages/statistics.scm (r-gdtools): Update to 0.3.6.

Change-Id: I87b02d5665f60c80d28085895b2693cda94f95bc
2024-02-26 12:34:11 +01:00
Ricardo Wurmus
b8ac0bf3b2
gnu: r-ggdendro: Update to 0.2.0.
* gnu/packages/statistics.scm (r-ggdendro): Update to 0.2.0.

Change-Id: I2a046a754ff08c83367e39e8692722611ebcb500
2024-02-26 12:34:11 +01:00
Ricardo Wurmus
bf7a7af1a4
gnu: r-ggplot2: Update to 3.5.0.
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.5.0.

Change-Id: I65435f9ddb69a9c62c79edd4eadd8c3d601251c6
2024-02-26 12:34:11 +01:00
Ricardo Wurmus
0277cc6c0d
gnu: r-boot: Update to 1.3-30.
* gnu/packages/statistics.scm (r-boot): Update to 1.3-30.

Change-Id: I566d221fb15305381d21816451c6b6ad9ded96e4
2024-02-26 12:34:11 +01:00
Ricardo Wurmus
e2a04cb31a
gnu: r-rtweet: Update to 2.0.0.
* gnu/packages/cran.scm (r-rtweet): Update to 2.0.0.

Change-Id: Icbcf69d53421ec7b556e52dbc6b375f0561b9fb3
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
e4279726c8
gnu: r-lwgeom: Update to 0.2-14.
* gnu/packages/cran.scm (r-lwgeom): Update to 0.2-14.

Change-Id: I9a3a32104dbacfcdd85361af9849b9d1b4a1bba1
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
1f0f6c7ae5
gnu: r-readtext: Update to 0.91.
* gnu/packages/cran.scm (r-readtext): Update to 0.91.

Change-Id: I14ccdf618f63cafa6d45eaacee3471c2eab74179
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
8df7dc03ed
gnu: r-dials: Update to 1.2.1.
* gnu/packages/cran.scm (r-dials): Update to 1.2.1.

Change-Id: Id0c6d2ee8da567702fe8a6ac3148a3df2c069cea
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
81eaa8ffb0
gnu: r-fastshap: Update to 0.1.1.
* gnu/packages/cran.scm (r-fastshap): Update to 0.1.1.

Change-Id: Ie2bd2570b427895d6780d762bd121c9962bd2a88
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
a276c9b70d
gnu: r-loo: Update to 2.7.0.
* gnu/packages/cran.scm (r-loo): Update to 2.7.0.
[propagated-inputs]: Add r-posterior.

Change-Id: I7d4accaa9762de855c739cb65ee6b517086ec8e1
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
b25c576995
gnu: r-sccore: Update to 1.0.5.
* gnu/packages/cran.scm (r-sccore): Update to 1.0.5.

Change-Id: Ibbf7b22f5ba9340e7f748b1a12bf7b3a28dff16a
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
8f61cce275
gnu: r-afex: Update to 1.3-1.
* gnu/packages/cran.scm (r-afex): Update to 1.3-1.

Change-Id: Idf37d0963aee6233a1a7a0dfd568efbdc9225607
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
0dfef25a8c
gnu: r-ggeffects: Update to 1.5.0.
* gnu/packages/cran.scm (r-ggeffects): Update to 1.5.0.

Change-Id: If6c506e395566ccf34254b4c205717efeb10234b
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
31ddac6ab4
gnu: r-mosaic: Update to 1.9.1.
* gnu/packages/cran.scm (r-mosaic): Update to 1.9.1.

Change-Id: Iae1ec6425ea9dcf82102cc8c6856265baef9ddae
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
917f84dcfe
gnu: r-superlearner: Update to 2.0-29.
* gnu/packages/cran.scm (r-superlearner): Update to 2.0-29.

Change-Id: I59aaaa9a2195e217966c589aab940f7bfdc6466d
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
ca76d23df2
gnu: r-nodbi: Update to 0.10.2.
* gnu/packages/cran.scm (r-nodbi): Update to 0.10.2.
[native-inputs]: Add r-knitr.

Change-Id: I052f662b87076c6f3e46129a0195c5e4415c6a4c
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
cd698ba6b4
gnu: r-officer: Update to 0.6.5.
* gnu/packages/cran.scm (r-officer): Update to 0.6.5.

Change-Id: I709c8af9feb02b838dc6939ec8348fb231ca881f
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
a89ef6742e
gnu: r-renv: Update to 1.0.4.
* gnu/packages/cran.scm (r-renv): Update to 1.0.4.

Change-Id: I1ed257f239663df37a02908bf204f763222b2e67
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
c87d9a8e1a
gnu: r-ctrdata: Update to 1.17.2.
* gnu/packages/cran.scm (r-ctrdata): Update to 1.17.2.

Change-Id: I019f971fe6cc8c34b63ebdff407e1f2e1ed6b98f
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
47b38a2200
gnu: r-shape: Update to 1.4.6.1.
* gnu/packages/cran.scm (r-shape): Update to 1.4.6.1.

Change-Id: Idcb756d0d016d9ed519ccdf3c0be4cd795277222
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
90d4cd54b7
gnu: r-secretbase: Update to 0.3.0.
* gnu/packages/cran.scm (r-secretbase): Update to 0.3.0.

Change-Id: Ic9e75a8746dd0a4d2c5a8ee64f4e242dfeda5fe5
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
2bf5d4336d
gnu: r-gprofiler2: Update to 0.2.3.
* gnu/packages/cran.scm (r-gprofiler2): Update to 0.2.3.

Change-Id: Ic6d1fcedc78d98c7d9dde719a98db283e8e3d9ef
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
16c239d5d8
gnu: r-ggside: Update to 0.3.0.
* gnu/packages/cran.scm (r-ggside): Update to 0.3.0.

Change-Id: I656cae1ae4a08f767b5426b154670c2581853430
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
0422d6e98d
gnu: r-arrow: Update to 14.0.2.1.
* gnu/packages/cran.scm (r-arrow): Update to 14.0.2.1.

Change-Id: Ie8b236a1d8b9b5786bb83f26a8463343d329faba
2024-02-26 12:34:10 +01:00
Ricardo Wurmus
31547cb64d
gnu: apache-arrow: Update to 14.0.2.
* gnu/packages/databases.scm (apache-arrow): Update to 14.0.2.

Change-Id: I9256111937ed7bb7bcf7420b821582fde83b3384
2024-02-26 12:34:10 +01:00
Zheng Junjie
9209e93d48
gnu: librime: Update to 1.10.0.
* gnu/packages/ibus.scm (librime): Update to 1.10.0.
[source]: Remove snippet. Remove patch.
[arguments]: Remove it.
* gnu/packages/patches/librime-fix-build-with-gcc10.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister patch.

Change-Id: Ifbf1cf92baa469e87c517958e5705dec085cc413
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2024-02-26 19:20:39 +08:00
Christina O'Donnell
926734a358
gnu: Add font-dongle.
* gnu/packages/fonts.scm (font-dongle): New variable.

Change-Id: I48449c3681b6bc9e90d41a8de7be0dfdd4e78153
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2024-02-26 19:20:39 +08:00
Andy Tai
66321bd94c
gnu: gama: Update to 2.29.
* gnu/packages/gps.scm (gama): Update to 2.29.
  [native-inputs]: Add yaml-cpp.

Change-Id: Ie4ffc8abea85ee9b11f35f58054c6213404c3d7e
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2024-02-26 11:50:28 +01:00
Felix Gruber
cc7486cd98
gnu: osm2pgsql: Update to 1.11.0.
* gnu/packages/geo.scm (osm2pgsql): Update to 1.11.0.
[arguments]: Look for proj API version 6 to use recent proj versions.
[inputs]: Remove proj-7; add cli11 and proj.

Change-Id: If1f14e5c675865d4485b16aca6146f555cc16d5e
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2024-02-26 11:43:36 +01:00
Efraim Flashner
b25b94335a
gnu: cmake: Adjust vim plugin directory.
* gnu/packages/cmake.scm (cmake)[arguments]: Add configure-flag to
install vim plugin to the correct directory.

Change-Id: I35909bcdb1c71a19ff76a81087e0b524163da624
2024-02-25 16:20:35 +02:00
Efraim Flashner
0a6663835c
gnu: poke: Adjust vim plugin directory.
* gnu/packages/engineering.scm (poke)[arguments]: Add configure-flag to
install vim plugin to the correct directory.

Change-Id: I8977fe1858a144ba630b3757e038142424cd1c23
2024-02-25 16:20:35 +02:00
Thorsten Wilms
386080366c
gnu: Add omins-lv2.
* gnu/packages/audio.scm (omins-lv2): New Variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: Ica6f11d66331476c65e2d971c6de5f8aacc46454
2024-02-25 13:14:21 +01:00
Ricardo Wurmus
1306beaf3f
gnu: Add emacs-combobulate.
* gnu/packages/emacs-xyz.scm (emacs-combobulate): New variable.

Change-Id: I0a46340861c920a3cbbd628733c18e5a302c065d
2024-02-25 10:02:19 +01:00
nafkhamdc
e79a2b77e3
gnu: Add r-rpresto.
* gnu/packages/cran.scm (r-rpresto): New variable.

Change-Id: I81b0e43ca75ab2df36f67367bfc73c4893be1a30
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-02-25 09:52:57 +01:00
Liliana Marie Prikler
92d8b4c959
gnu: renpy: Update to 8.2.0.
* gnu/packages/aux-files/renpy/renpy.in (path-to-saves): Honour
RENPY_PATH_TO_SAVES.
(path_to_logdir, predefined_searchpath): New procedures.
* gnu/packages/game-development.scm (python-renpy): Update to 8.2.0.
2024-02-25 09:32:49 +01:00
Liliana Marie Prikler
8d79ed2ec3
gnu: python-pygame-sdl2: Update to 2.1.0+renpy8.2.0.
* gnu/packages/game-development.scm (python-pygame-sdl2): Update to
2.1.0+renpy8.2.0.
2024-02-25 09:32:49 +01:00
Sharlatan Hellseher
05bbe9993f
gnu: lcsync: Simplify package.
* gnu/packages/networking.scm (lcsync) [arguments]: Use G-expressions.
Remove redundant 'target' variable which has no use.

Change-Id: I19ecadb5259ed0cfa37e12d109141dfc8be98587
2024-02-24 20:18:00 +00:00
Sharlatan Hellseher
74c43acff3
gnu: lcrq: Simplify package.
* gnu/packages/networking.scm (lcrq) [arguments]: Use G-expressions.
Remove redundant 'target' variable which has no use.

Change-Id: I12fad224eb272383fce3025ddf6f17f8e59aab52
2024-02-24 20:14:12 +00:00
Sharlatan Hellseher
39195914ec
gnu: librecast: Simplify package.
* gnu/packages/networking.scm (librecast) [arguments]: Use G-expressions.
Remove redundant 'target' variable which has no use.

Change-Id: Ib87e04b7fb9d284436659fd0503da4892807a977
2024-02-24 20:14:06 +00:00
Timotej Lazar
04c558dd1b
gnu: wireshark: Update to 4.2.3 [security-fixes].
* gnu/packages/networking.scm (wireshark): Update to 4.2.3.
[build-system]: Switch to qt-build-system.
[arguments]: Drop unnecessary -DUSE_qt6 from #:configure-flags. Drop test
workaround.
[inputs]: Add required inputs lua-5.2 and speexdsp.

Change-Id: Ib859c0e64377b2920a4eacc2ef4d4393e34426e0
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-02-24 18:09:16 +00:00
Josselin Poiret
313458c58c
gnu: git-filter-repo: Update to 2.38.0.
* gnu/packages/patches/git-filter-repo-generate-doc.patch: New file.
* gnu/local.mk (dist_patch_DATA): Regisiter it.
* gnu/packages/version-control.scm (git-filter-repo): Update to 2.38.0.
[source]: Switch to git-fetch.
Use the patch.
[build-system]: Switch to gnu-build-system.
[native-inputs]: Add asciidoc, docbook-xsl, libxml2, xmlto.

Modified-by: Hilton Chain <hako@ultrarare.space>
Change-Id: I7b15975ea56c44ae580d19cfe5a9e3eb75c6db0d
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-02-25 00:07:30 +08:00
Nicolas Graves via Guix-patches via
e3e64acdb8
gnu: b4: Ensure git presence.
* gnu/packages/version-control.scm (b4): Ensure git presence.
[arguments]<#:phases>: Add phase hardcode-git-bin.
[inputs]: Add git-minimal.

Change-Id: Ib2dca06009cdacc0e5ab4ab227cd30991474404c
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-02-25 00:04:02 +08:00
Hartmut Goebel
f861793141
gnu: Add ruby-fog-libvirt.
* gnu/packages/ruby.scm (ruby-fog-libvirt): New variable.
2024-02-24 16:44:02 +01:00
Hartmut Goebel
ec9c9bd6e6
gnu: Add ruby-fog-xml.
* gnu/packages/ruby.scm (ruby-fog-xml): New variable.
2024-02-24 16:44:02 +01:00
Hartmut Goebel
01035b2140
gnu: Add ruby-fog-json.
* gnu/packages/ruby.scm (ruby-fog-json): New variable.
2024-02-24 16:44:02 +01:00