* gnu/packages/bioinformatics.scm (vcflib)[arguments]: In custom
generated pkg-config file, link with all needed libraries and
fix linker library.
* gnu/packages/patches/freebayes-devendor-deps.patch: Adjust accordingly.
* guix/channels.scm (sexp->channel, manifest-entry-channel): New
procedures.
(profile-channels): Replace lambda by 'manifest-entry-channel'.
(channel-instance->sexp): New procedure.
(channel-instances->manifest)[instance->entry]: Use
'channel-instance->sexp' instead of inline code.
* guix/scripts/package.scm (export-manifest): New procedure.
(show-help, %options): Add '--export-manifest'.
(process-query): Honor it.
* guix/build/profiles.scm (build-profile): Mention it.
* tests/guix-package.sh: Test it.
* doc/guix.texi (Invoking guix package): Document it.
This test goes from 58s to 10s wall-clock time.
Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>.
* tests/packages.scm ("fold-available-packages with/without cache"):
Remove 'find-duplicates'. Add 'list->set*' and use it instead of
'find-duplicates', 'delete-duplicates', and 'lset='.
This allows users to use '--with-debug-info=rdma-core' and is otherwise
equivalent to "Release".
* gnu/packages/linux.scm (rdma-core)[arguments]: Remove #:build-type.
Fixes <https://bugs.gnu.org/46229>.
This flag was added in commit 2b14c60d38.
It is apparently no longer needed. Worse, it now causes segfaults when
used with Omni-Path devices, as reported in the bug above.
* gnu/packages/linux.scm (rdma-core)[arguments]: Remove
"-DIOCTL_MODE=write" from #:configure-flags.
* build-aux/test-driver.scm: Add an exec-based shebang and set the script
executable bit.
(main): Insert a newline after the version string is printed with --version.
* build-aux/test-driver.scm (show-help): Add the help text for the
new '--errors-only' option.
(%options): Add the errors-only option.
(test-runner-gnu): Add the errors-only? parameter and update doc. Move the
logging of the test data after the test has completed, so a choice can be made
whether to keep it or discard it based on the value of the test result.
(main): Pass the errors-only? option to the driver.
* doc/guix.texi (Running the Test Suite): Document the new option.
* build-aux/test-driver.scm (show-help): Add help text for the new --select
and --exclude options.
(%options): Add the new select and exclude options.
(test-runner-gnu): Pass them to the test runner. Update doc.
(test-match-name*, test-match-name*/negated, %test-match-all): New variables.
(main): Compute the test specifier based on the values of the new options and
apply it to the current test runner when running the test file.
* doc/guix.texi (Running the Test Suite): Document the new options.
The Automake parallel test harness does its own smart detection of the
terminal color capability and always provides the --color-tests argument to
the driver. This change defaults the --color-tests argument to true when the
test driver is run on its own (not via Automake).
* build-aux/test-driver.scm (main): Set the default value of the --color-tests
argument to true when it's not explicitly provided.
This makes it easier (and less surprising) for users to experiment with the
custom Scheme test driver directly. The behavior is unchanged from Automake's
point of view.
* build-aux/test-driver.scm (main): Make the --log-file and --trs-file
arguments optional and update doc. Only open, redirect and close a port to a log file when
the --log-file option is provided. Only open and close a port to a trs file
when the --trs-file option is provided.
(test-runner-gnu): Set OUT-PORT parameter default value to the current output
port. Set the TRS-PORT parameter default value to a void port. Update doc.
* guix/import/gnu.scm (gnu->guix-package): Use 'formatted-message' and
mention the package name in error messages.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu/packages/emacs.scm (emacs) [strip-double-wrap]:
Use regex to find emacs executable. This works even when the version is
changed by package transformations (ex: version=git.master)
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* guix/store/database.scm (assert-integer): New procedure.
(update-or-insert): Use it to validate NAR-SIZE and TIME.
* tests/store-database.scm ("sqlite-register with incorrect size"): New
test.
* gnu/packages/emacs-xyz.scm (emacs-adaptive-wrap)[source]: Update URI.
This fixes a "download failed" error when building the package.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
Match Hydra behaviour where the job_name is <package_name>.<system>. This
allows to operate on several builds of the same package in the CI, regardless
of their version.
* gnu/ci.scm (job-name): Remove package version from the job name.
