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Author SHA1 Message Date
Nicolas Goaziou
735a8d997a
gnu: emacs-csv: Use proper Texinfo markup in description. 
* gnu/packages/emacs-xyz.scm (emacs-csv)[description]: Use proper Texinfo
markup.
 2020-03-28 21:33:16 +01:00
Amin Bandali
c2cf286c62
Update email address and Savannah handle for Amin Bandali. 
* .mailmap, gnu/local.mk, gnu/packages/emacs-xyz.scm, gnu/packages/emacs.scm,
gnu/packages/fonts.scm, gnu/packages/fpga.scm, gnu/packages/lean.scm,
gnu/packages/maths.scm, gnu/packages/pulseaudio.scm: Update my email address.
* build-aux/git-authenticate.scm: Update my Savannah handle.
 2020-03-28 16:30:07 -04:00
Nicolas Goaziou
255fb17b25
gnu: armadillo: Fix typo in description. 
* gnu/packages/maths.scm (armadillo): Fix spaces after "eg.".
 2020-03-28 21:27:33 +01:00
Marius Bakke
043c3d6499
gnu: KOrganizer: Fix typo in description. 
* gnu/packages/kde-pim.scm (korganizer)[description]: clanedaring -> calendaring.
 2020-03-28 20:03:50 +01:00
Efraim Flashner
619edce5cd
gnu: youtube-viewer: Add missing comment. 
This is a follow-up to 315b98b9eb.

* gnu/packages/video.scm (youtube-viewer)[arguments]: Add comment
explaining why we don't install the gtk3 variant.
 2020-03-28 21:07:08 +03:00
Leo Famulari
e4257138fe
Revert "gnu: gnupg: Use ~/.guix-profile/bin/pinentry by default." 
This commit didn't work:

https://issues.guix.gnu.org/issue/24076#13

This reverts commit c7af9d0b5e.
 2020-03-28 11:50:41 -04:00
Marius Bakke
388b432cea
deploy: Remove use of '~*' in format string. 
...since 'msgfmt' fails to interpret it.  Reported by Vagrant Cascadian
in <https://lists.gnu.org/archive/html/guix-devel/2020-03/msg00340.html>.
See also <https://bugs.gnu.org/37505>.

* guix/scripts/deploy.scm (show-what-to-deploy): Use ~d instead of ~* when
displaying machines that will be deployed.
 2020-03-28 15:55:13 +01:00
Alex Griffin
54cf5e2a35
gnu: pagekite: Update to 1.5.0.200327. 
* gnu/packages/networking.scm (pagekite): Update to 1.5.0.200327.
 2020-03-28 09:08:16 -05:00
Alex Griffin
27d8b9d976
gnu: python-socksipychain: Update to 2.1.1-1.eb5ee87. 
* gnu/packages/python-xyz.scm (python-socksipychain): Update to 2.1.1-1.eb5ee87.
 2020-03-28 09:07:06 -05:00
Pierre Neidhardt
aa7f3ec0e0
gnu: sbcl-cl-containers: Update to 20200212. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-containers): Update to 20200212.
 2020-03-28 10:39:20 +01:00
Christopher Baines
24b5d8f745
gnu: lollypop: Update to 1.2.32. 
* gnu/packages/gnome.scm (lollypop): Update to 1.2.32.
 2020-03-28 09:17:59 +00:00
Ricardo Wurmus
27c3afa940
gnu: r-curl: Fix patch to respect CURL_CA_BUNDLE. 
Fixes <https://debbugs.gnu.org/40262>.

* gnu/packages/cran.scm (r-curl)[arguments]: Ensure CURLOPT_CAINFO actually
gets set.
 2020-03-27 23:38:31 +01:00
Nicolas Goaziou
9fad055023
gnu: grammalecte: Update to 1.8.0. 
* gnu/packages/dictionaries.scm (grammalecte): Update to 1.8.0.
 2020-03-27 23:37:20 +01:00
Nicolas Goaziou
734eb7d79e
gnu: fet: Update to 5.44.0. 
* gnu/packages/education.scm (fet): Update to 5.44.0.
 2020-03-27 23:34:37 +01:00
Nicolas Goaziou
57be2cadf8
gnu: emacs-flycheck-grammalecte: Update to 1.0. 
* gnu/packages/emacs-xyz.scm (emacs-flycheck-grammalecte): Update to 1.0.
 2020-03-27 23:32:11 +01:00
Michael Rohleder
f71bce9bb2
gnu: tmate: Update to 2.4.0. 
* gnu/packages/terminals.scm (tmate): Update to 2.4.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2020-03-27 16:49:37 -04:00
Michael Rohleder
816bce684c
gnu: Neofetch: Update to 7.0.0. 
* gnu/packages/admin.scm (neofetch): Update to 7.0.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2020-03-27 16:42:26 -04:00
Ludovic Courtès
7cb77b7896
gnu: mailutils: Update to 3.9. 
* gnu/packages/mail.scm (mailutils): Update to 3.9.
[arguments]: In 'prepare-test-suite' phase, adjust name of the mda
'testsuite' files.
 2020-03-27 19:09:30 +01:00
Ludovic Courtès
2b6fe60599
packages: Use Guile 3.0 for grafts. 
* guix/packages.scm (guile-2.0): Rename to...
(guile-for-grafts): ... this, and adjust callers.  Refer to 'guile-3.0'
instead of 'guile-2.0'.
 2020-03-27 19:09:30 +01:00
Ludovic Courtès
3139739802
gnu: guile-next: Update to 3.0.2. 
* gnu/packages/guile.scm (guile-3.0): Update to 3.0.2.
* gnu/packages/patches/guile-3.0-crash.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2020-03-27 19:09:30 +01:00
Pierre Neidhardt
eb5341c235
gnu: Add trivial-package-local-nicknames. 
* gnu/packages/lisp-xyz.scm (cl-trivial-package-local-nicknames,
  sbcl-trivial-package-local-nicknames): New variables.
 2020-03-27 18:40:21 +01:00
Ricardo Wurmus
bc3fda5d2b
services/nfs: Replace nfs-version with nfs-versions. 
Instead of accepting a string for just one protocol version accept a list of
supported versions.

* gnu/services/nfs.scm (<nfs-configuration>)[nfs-version]: Remove field and
replace...
[nfs-versions]: ...with this new field.
(nfs-shepherd-services): Pass as many "--nfs-version" options as there are
supported versions.
* doc/guix.texi (Network File System): Document nfs-versions.
 2020-03-27 15:30:44 +01:00
Jakub Kądziołka
9483782a61
gnu: rust: Add 1.39 
* gnu/packages/rust.scm (rust-1.39): New variable.
  (%cargo-reference-hash): Add a comment explaining the role of the
  variable.
 2020-03-27 14:28:11 +01:00
Jakub Kądziołka
444bc2ddf2
gnu: rust: Add 1.38 
All packages are still built with rustc 1.37, but users will see rustc
1.38 in their profiles, and packages that require newer compiler
versions will be possible to add.

* gnu/packages/rust.scm (rust-1.31): Factor out the
  patch-command-exec-tests phase to a separate procedure.
  (patch-command-exec-tests-phase): New procedure.
  (rust): Rename to rust-1.37, make rust an alias.
  (rust-1.38): New variable.
 2020-03-27 14:28:06 +01:00
Nicolas Goaziou
1a7247c629
gnu: asymptote: Update to 2.65. 
* gnu/packages/plotutils.scm (asymptote): Update to 2.65.
 2020-03-27 12:20:35 +01:00
Ricardo Wurmus
2ba5253044
gnu: r-multiassayexperiment: Update to 1.12.6. 
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.6.
 2020-03-27 11:21:13 +01:00
Ricardo Wurmus
37732212a3
gnu: r-locfit: Update to 1.5-9.4. 
* gnu/packages/statistics.scm (r-locfit): Update to 1.5-9.4.
 2020-03-27 11:21:13 +01:00
Ricardo Wurmus
c99880320d
gnu: r-class: Update to 7.3-16. 
* gnu/packages/statistics.scm (r-class): Update to 7.3-16.
 2020-03-27 11:21:13 +01:00
Ricardo Wurmus
3345157fa6
gnu: r-xgboost: Update to 1.0.0.2. 
* gnu/packages/cran.scm (r-xgboost): Update to 1.0.0.2.
 2020-03-27 11:21:13 +01:00
Ricardo Wurmus
76d7ce4f45
gnu: r-rjava: Update to 0.9-12. 
* gnu/packages/cran.scm (r-rjava): Update to 0.9-12.
 2020-03-27 11:21:13 +01:00
Ricardo Wurmus
84b7c4aa17
gnu: r-sf: Update to 0.9-0. 
* gnu/packages/cran.scm (r-sf): Update to 0.9-0.
[native-inputs]: Add r-knitr.
 2020-03-27 11:21:13 +01:00
Ricardo Wurmus
498c887a96
gnu: r-bayestestr: Update to 0.5.3. 
* gnu/packages/cran.scm (r-bayestestr): Update to 0.5.3.
[native-inputs]: Add r-knitr.
 2020-03-27 11:21:13 +01:00
Ricardo Wurmus
9c189913e9
gnu: r-hdf5r: Update to 1.3.2. 
* gnu/packages/cran.scm (r-hdf5r): Update to 1.3.2.
[native-inputs]: Add r-knitr.
 2020-03-27 11:21:13 +01:00
Ricardo Wurmus
6232a36291
gnu: r-ggally: Update to 1.5.0. 
* gnu/packages/cran.scm (r-ggally): Update to 1.5.0.
 2020-03-27 11:21:13 +01:00
Christopher Baines
0a76a4e073
gnu: guix-data-service: Update to 0.0.1-19.d1c243f. 
These changes support the guix-data-service-backup-database and
guix-data-service-create-small-backup scripts. These are shell scripts, so
require coreutils from the build environment at runtime as well as binaries
from postgresql, ephemeralpg and optionally util-linux (for ionice and
renice).

* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-19.d1c243f.
[arguments]: Add (ice-9 ftw) and (ice-9 match) to #:modules, change the
'install phase to wrap all bin files with some inputs as well.
[inputs]: Add util-linux, include ephemeralpg from native-inputs and switch
postgresql for postgresql-11.
[native-inputs]: Move ephemeralpg to inputs.
 2020-03-26 22:51:36 +00:00
Lars-Dominik Braun
01d5f2c5cd
gnu: Add python-json5. 
* gnu/packages/python-xyz.scm (python-json5): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-03-26 23:45:41 +01:00
Lars-Dominik Braun
aefcfecd84
gnu: Add python-pytest-check-links. 
* gnu/packages/python-xyz.scm (python-pytest-check-links): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-03-26 23:45:41 +01:00
Ludovic Courtès
be6520e6a5
vm: Distinguish between success and failure of the guest code. 
Fixes <https://bugs.gnu.org/34276>.
Reported by Tobias Geerinckx-Rice <me@tobias.gr>.

* gnu/system/vm.scm (expression->derivation-in-linux-vm)[loader]:
Produce '/xchg/.exit-status' file upon success.
* gnu/build/vm.scm (load-in-linux-vm): Check for 'xchg/.exit-status'
once QEMU has completed and respond accordingly.
 2020-03-26 23:45:41 +01:00
Jakub Kądziołka
60eee3e6de
gnu: Add ROPgadget. 
* gnu/packages/cybersecurity.scm: New file.
(ropgadget): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register the file.
 2020-03-26 22:53:02 +01:00
Björn Höfling
eebaed2b76
gnu: java-tomcat: Update to 8.5.53. 
This fixes CVE-2020-1938 ("Ghostcat").

* gnu/packages/web.scm (java-tomcat): Update to 8.5.53.
[properties]: Add cpe-name.
 2020-03-26 21:39:49 +01:00
Marius Bakke
3089b70d76
gnu: icu4c: Explicitly add patch flags in replacement package. 
This is to prevent a build failure when this gets merged to 'core-updates'
which does not have any patch-flags to inherit.

* gnu/packages/icu4c.scm (icu4c/fixed)[source](patch-flags): New field.
 2020-03-26 21:15:08 +01:00
Marius Bakke
9ea9ff6b0f
gnu: help2man: Update to 1.47.13. 
* gnu/packages/man.scm (help2man/latest): Update to 1.47.13.
 2020-03-26 20:20:48 +01:00
Alexandros Theodotou
9b0c95cc68
gnu: Add python-pywinrm. 
* gnu/packages/python-xyz.scm (python-pywinrm): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-03-26 19:14:44 +00:00
Alexandros Theodotou
c596359729
gnu: Add python-requests_ntlm. 
* gnu/packages/python-web.scm (python-requests_ntlm): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-03-26 19:14:44 +00:00
Alexandros Theodotou
163997c961
gnu: Add python-ntlm-auth. 
* gnu/packages/python-crypto.scm (python-ntlm-auth): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-03-26 19:14:44 +00:00
Alexandros Theodotou
f8dcdf2b36
gnu: Add python-kerberos. 
* gnu/packages/python-crypto.scm (python-kerberos): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-03-26 19:14:44 +00:00
Roel Janssen
79c395dde3
gnu: Update sambamba to 0.7.1. 
* gnu/packages/bioinformatics.scm (sambamba): Update to 0.7.1;
  Remove unneeded undead input.
 2020-03-26 18:08:27 +01:00
Naga Malleswari
db47adb0c7
gnu: Add 7kaa. 
* gnu/packages/games.scm (7kaa): New variable.
 2020-03-26 15:55:02 +01:00
Efraim Flashner
50e45d8629
gnu: boinc-client: Update to 7.16.5. 
* gnu/packages/distributed.scm (boinc-client): Update to 7.16.5.
 2020-03-26 14:08:24 +02:00
Efraim Flashner
f87d594238
gnu: boinc-server: Fix build. 
* gnu/packages/distributed.scm (boinc-server)[inputs]: Replace openssl
with openssl-1.0, mariadb with mariadb:dev.
 2020-03-26 14:08:24 +02:00