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126336 commits

Author SHA1 Message Date
Ricardo Wurmus
8027b0a269
gnu: Add python-funsor.
* gnu/packages/machine-learning.scm (python-funsor): New variable.

Change-Id: Ibd4b993e4d55a6fdda70fe2b6cf4f665730b6739
2023-10-25 16:58:40 +02:00
Ricardo Wurmus
136700181b
gnu: Add python-assertpy.
* gnu/packages/python-check.scm (python-assertpy): New variable.

Change-Id: Ia17d256361eebe977a7d663b473e6c907ffe4ec2
2023-10-25 16:58:40 +02:00
Ricardo Wurmus
0618aaba01
gnu: python-sphinx-gallery: Update to 0.14.0.
* gnu/packages/sphinx.scm (python-sphinx-gallery): Update to 0.14.0.
[build-system]: Use pyproject-build-system.
[arguments]: Remove custom phases; add custom build phase
'delete-webp-example; move test flags to #:test-flags.
[propagated-inputs]: Add python-jupyterlite-sphinx.

Change-Id: I58f4b952fe5a2bf942d77813a8a2eeef2e4750b6
2023-10-25 16:58:40 +02:00
Ricardo Wurmus
617bca2ab0
gnu: Add python-jupyterlite-sphinx.
* gnu/packages/jupyter.scm (python-jupyterlite-sphinx): New variable.

Change-Id: I182c98e0c47d28012882994824232c3473ba3dcd
2023-10-25 16:58:40 +02:00
Ricardo Wurmus
1b9a0135fb
gnu: Add python-jupyterlite-core.
* gnu/packages/jupyter.scm (python-jupyterlite-core): New variable.

Change-Id: I3b015f7bbb45d9575280a5b8c01d67459d6f143e
2023-10-25 16:58:40 +02:00
Ricardo Wurmus
f1499ff35a
gnu: Add r-deming.
* gnu/packages/cran.scm (r-deming): New variable.

Change-Id: I9374a69603f88dd8c78a3c5bd2bdf2b992de2101
2023-10-25 16:58:40 +02:00
Ricardo Wurmus
565c643b74
gnu: r-httpuv: Update to 1.6.12.
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.12.
[arguments]: Remove.
[native-inputs]: Add pkg-config.

Change-Id: I1ae9378ce65a689869edd921f3f64a99aa714788
2023-10-25 16:58:40 +02:00
Ricardo Wurmus
bf3ec59b29
gnu: r-ggplot2: Update to 3.4.4.
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.4.4.

Change-Id: Ia21a38da8fdbcefaa6521a6843c4431b0d1ff47d
2023-10-25 16:58:40 +02:00
Ricardo Wurmus
fda8b9e8de
gnu: r-gdata: Update to 3.0.0.
* gnu/packages/statistics.scm (r-gdata): Update to 3.0.0.
[inputs]: Remove perl.

Change-Id: If9a66e4c8a8030214d53d7b2934c79cd098a278c
2023-10-25 16:58:40 +02:00
Tobias Geerinckx-Rice
d461dd81cd
gnu: Remove left-over python-pycrypto patches.
This follows up on commit a55e18f17c.

Change-Id: If61e46da1dc4f352b362ad3db42859322846984b
2023-10-22 02:00:00 +02:00
Ricardo Wurmus
aabfddbe8b
gnu: Add r-ggdist.
* gnu/packages/cran.scm (r-ggdist): New variable.

Change-Id: Ia9f57e1efcbb9df08a79d9e51bc438fa64fe61e2
2023-10-25 13:33:12 +02:00
Paul A. Patience
c6d2bb9d0a
gnu: gnuplot: Update to 5.4.9.
* gnu/packages/maths.scm (gnuplot): Update to 5.4.9.
[arguments]<#:configure-flags>: Add --with-qt=no.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-25 11:59:59 +02:00
André Batista
efe9e0ce0c
gnu: lighttpd: Update to 1.4.72.
* gnu/packages/web.scm (lighttpd): Update to 1.4.72.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-25 11:59:59 +02:00
Paul A. Patience
eb194aba18
gnu: python-versioneer: Update to 0.29.
* gnu/packages/python-xyz.scm (python-versioneer): Update to 0.29.
[build-system]: Switch to pyproject-build-system.
[arguments, native-inputs, propagated-inputs]: New fields.
[license]: Set to Unlicense.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-25 11:59:59 +02:00
Hilton Chain
50fa8bd0a3
gnu: picard: Update to 2.10.
* gnu/packages/music.scm (picard): Update to 2.10.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-25 11:59:58 +02:00
Cayetano Santos
4b72bd264a
gnu: emacs-doom-modeline: Update to 4.0.1.
* gnu/packages/emacs-xyz.scm (emacs-doom-modeline): Update to 4.0.1.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-25 11:59:58 +02:00
Cayetano Santos
6fa7ed0411
gnu: emacs-exwm: Update to 0.28.
* gnu/packages/emacs-xyz.scm (emacs-exwm): Update to 0.28.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-25 11:59:58 +02:00
Bruno Victal
1e5ec9d853
gnu: hplip: Fix USB timeouts.
* gnu/packages/patches/hplip-usb-timeout.patch: New file.
* gnu/local.mk: Register it.
* gnu/packages/cups.scm (hplip): Use it.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-25 11:59:58 +02:00
Imran Iqbal
a0060934a5
gnu: curlie: Update to 1.7.2.
* gnu/packages/curl.scm (curlie): Update to 1.7.2.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
Change-Id: Ic54bb5c1975fe8b954b4ab4b72ca5748c0924b7a
2023-10-25 11:59:58 +02:00
Vagrant Cascadian
137ff33daf
gnu: diffoscope: Update to 251.
* gnu/packages/diffoscope.scm (diffoscope): Update to 251.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-25 11:59:58 +02:00
Bruno Victal
0ab3b59149
gnu: mympd: Update to 12.1.1.
* gnu/packages/mpd.scm (mympd): Update to 12.1.1.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-25 11:59:58 +02:00
Artyom V. Poptsov
62d2155cc2
gnu: guile-dsv: Update to 0.7.1.
* gnu/packages/guile-xyz.scm (guile-dsv): Update to 0.7.1.
  [arguments]: Remove "strip" phase.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-25 11:59:58 +02:00
Guillaume Le Vaillant
e0b94a4d27
gnu: gqrx: Update to 2.17.3.
* gnu/packages/radio.scm (gqrx): Update to 2.17.3.

Change-Id: Ie5722c0f693e41bb1eadb3e2397ce3f4404b8664
2023-10-25 11:26:59 +02:00
Guillaume Le Vaillant
9b42568da6
gnu: eisl: Update to 3.50.
* gnu/packages/lisp.scm (eisl): Update to 3.50.

Change-Id: Iecefae965ab5a4f8a6d7e5cff2c9d2c2a02668ac
2023-10-25 11:05:59 +02:00
Artyom Bologov
1da091366a
gnu: abcl: Update to 1.9.2.
* gnu/packages/java.scm (abcl): Update to 1.9.2.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-10-25 10:42:22 +02:00
Mark H Weaver
00747316ee
gnu: icecat: Update to 115.4.0-guix0-preview1 [security fixes].
Includes fixes for CVE-2023-5721, CVE-2023-5724, CVE-2023-5725,
CVE-2023-5726, CVE-2023-5727, CVE-2023-5728, CVE-2023-5730, and
CVE-2023-5732.

* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
2023-10-24 15:56:39 -04:00
Simon Tournier
7e4324575c
services: admin: Export rottlog-configuration accessors.
* gnu/services/admin.scm (<rottlog-configuration>): Rename accessors
rottlog-rottlog to rottlog-configuration-rottlog, rottlog-rc-file to
rottlog-configuration-rc-file, rottlog-rotations to
rottlog-configuration-rotations, rottlog-jobs to rottlog-configuration-jobs.
(rottlog-etc, rottlog-jobs-or-default, rottlog-service-type): Adjust
accordingly.
2023-10-24 18:51:39 +02:00
Cayetano Santos
f3714b3d5f
gnu: Add emacs-pacfiles-mode.
* gnu/packages/emacs-xyz.scm (emacs-pacfiles-mode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Change-Id: I3ddb9ba2beff5466dc235915da18365f1fd389c2
2023-10-24 18:06:21 +02:00
Artyom V. Poptsov
6fd589898c
gnu: go-ipfs: Update to 0.15.0.
* gnu/packages/ipfs.scm (go-ipfs): Update to 0.15.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-24 18:06:21 +02:00
Artyom V. Poptsov
2919b5ae31
gnu: Deprecate the "go-ipfs" variable.
* gnu/packages/ipfs.scm (go-ipfs): Rename to "kubo".
  (go-ipfs): Define as deprecated by "kubo".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-24 18:06:21 +02:00
André Batista
1f6babf0c4
gnu: tor: Update to 0.4.8.7.
* gnu/packages/tor.scm (tor): Update to 0.4.8.7.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-24 18:06:21 +02:00
Ludovic Courtès
04215779ba
gnu: guile-simple-zmq: Update to d25d186.
Includes a fix for a use-after-free bug:
<https://github.com/jerry40/guile-simple-zmq/pull/20>

* gnu/packages/guile-xyz.scm (guile-simple-zmq): Update to d25d186.

Change-Id: I1dfb7b1c0e97bb92425ade676ab29be33b8ae20d
2023-10-24 18:06:21 +02:00
Ludovic Courtès
216f8ffff4
doc: cookbook: Add cross references to the manual regarding manifests.
* doc/guix-cookbook.texi (The benefits of manifests)
(Reproducible profiles): Add cross-references.
2023-10-24 18:06:21 +02:00
Ludovic Courtès
37b0ddbcb7
doc: cookbook: Suggest ‘guix shell’ as an alternative to multiple profiles.
Multiple profiles are relatively hard to set up and maintain, especially
for newcomers.  Thus, suggest ‘guix shell’ as an alternative.

* doc/guix-cookbook.texi (Guix Profiles in Practice): Add note
linking to ‘guix shell’.
(The benefits of manifests): Remove outdated info about ‘guix
environment’ and profiles that may be GC’d.  Update.
2023-10-24 18:06:21 +02:00
Ludovic Courtès
569c085927
doc: Mention Guix Home in “Getting Started”.
* doc/guix.texi (Getting Started): Mention Guix Home.
(Home Configuration): Remove “still under development” note.
2023-10-24 18:06:20 +02:00
Ludovic Courtès
978b9619a8
doc: Move “System Troubleshooting Tips” below.
So far this section would appear before “Getting Started”.  This moves
it right after “System Configuration”.

* doc/guix.texi (System Troubleshooting Tips): Move after “System
Configuration”.
2023-10-24 18:06:20 +02:00
Andre A. Gomes
d22d2a05c3
gnu: nyxt: Update to 3.9.1.
* gnu/packages/web-browsers.scm (nyxt): Update to 3.9.1.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: I8c8fadb197477566f1faea199cbe9ed8d25d9847
2023-10-24 14:38:45 +02:00
Andre A. Gomes
8ea21f7c91
gnu: cl-slime-swank: Update to 2.28-0.0cc2e73.
* gnu/packages/lisp-xyz.scm (sbcl-slime-swank): Update to 2.28-0.0cc2e73.
  [arguments]: Update 'set-fasl-directory' phase.
  (cl-slime-swank)[arguments]: Remove 'revert-asd-patch' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: I2a363582832745e88ce6815a2ff144f29dce9bbc
2023-10-24 14:38:45 +02:00
Andre A. Gomes
d62a613bcf
gnu: emacs-slime: Update to 2.28-0.0cc2e73.
* gnu/packages/emacs-xyz.scm (emacs-slime): Update to 2.28-0.0cc2e73.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: I6de344de136c7f68a93e6b5e02f6a96b3e3127e5
2023-10-24 14:38:45 +02:00
Ricardo Wurmus
957d4025c5
gnu: Add python-google-pasta.
* gnu/packages/python-xyz.scm (python-google-pasta): New variable.

Change-Id: I0545997e7ef1eaec73607fed8e34391134ed0d47
2023-10-24 14:22:27 +02:00
Bruno Victal
bc1678abdb
gnu: httpd: Update to 2.4.58. [security fixes]
Includes fixes for CVE-2023-45802, CVE-2023-43622 and CVE-2023-31122.

References:
  * <https://dlcdn.apache.org/httpd/CHANGES_2.4.58>

* gnu/packages/web.scm (httpd): Update to 2.4.58.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-10-24 14:59:38 +03:00
Efraim Flashner
f8dfe85a36
gnu: rust-cpal-0.13: Accept any version of jack.
* gnu/packages/crates-io.scm (rust-cpal-0.13)[source]: Add snippet to
force accepting any version of the jack crate.

Change-Id: Ic9bf0ad8434eeb02b3ff8d6373155a40851d3402
2023-10-24 14:53:34 +03:00
Steve George
81d7b81643
gnu: Add rust-librespot-playback-0.4.
* gnu/packages/crates-io.scm (rust-librespot-playback-0.4): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: Ic8f7cc49dca37f1aa4fbd3c2fae26dd0976d44a4
2023-10-24 14:53:34 +03:00
Steve George
153b63134d
gnu: Add rust-rodio-0.15.
* gnu/packages/crates-io.scm (rust-rodio-0.15): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: I4b084b5f7bdba29f2a0661c0e106169ffde5c74a
2023-10-24 14:53:33 +03:00
Steve George
188e08e779
gnu: Add rust-symphonia-0.4.
* gnu/packages/crates-io.scm (rust-symphonia-0.4): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: Ic7f1871fc1c7cadab84872b28cd2df1939546a31
2023-10-24 14:53:32 +03:00
Steve George
4f88b3aaf6
gnu: Add rust-symphonia-format-wav-0.4.
* gnu/packages/crates-io.scm (rust-symphonia-format-wav-0.4): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-10-24 14:53:32 +03:00
Steve George
52b609f5b9
gnu: Add rust-symphonia-format-ogg-0.4.
* gnu/packages/crates-io.scm (rust-symphonia-format-ogg-0.4): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-10-24 14:53:32 +03:00
Steve George
5e140b7839
gnu: Add rust-symphonia-format-iosmp4-0.4.
* gnu/packages/crates-io.scm (rust-symphonia-format-isomp4-0.4): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-10-24 14:53:32 +03:00
Steve George
f96936193b
gnu: Add rust-symphonia-codec-vorbis-0.4.
* gnu/packages/crates-io.scm (rust-symphonia-codec-vorbis-0.4): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-10-24 14:53:31 +03:00
Steve George
3d0e0d7dec
gnu: Add rust-symphonia-code-pcm-0.4
* gnu/packages/crates-io.scm (rust-symphonia-code-pcm-0.4): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-10-24 14:53:31 +03:00