Commit graph

49270 commits

Author SHA1 Message Date
Tobias Geerinckx-Rice
8e45ec509e
gnu: sqitch: Remove perl-file-homedir input.
* gnu/packages/databases.scm (perl-file-homedir)[inputs]: Remove perl-file-homedir.
2019-10-14 19:33:18 +02:00
Efraim Flashner
303469d69e
gnu: Add enlightenment-wayland.
* gnu/packages/enlightenment.scm (enlightenment-wayland): New variable.
2019-10-14 20:07:35 +03:00
Ludovic Courtès
29ea9e14ee
gnu: gtkmm: Update to 3.24.1.
* gnu/packages/gtk.scm (gtkmm): Update to 3.24.1.
2019-10-14 18:25:31 +02:00
Ludovic Courtès
7a6bbe9b68
gnu: gspell: Update to 1.8.2.
* gnu/packages/gnome.scm (gspell): Update to 1.8.2.
2019-10-14 18:25:31 +02:00
Ludovic Courtès
a00a946ac5
gnu: gfortran: Add version 9.x.
* gnu/packages/gcc.scm (gfortran-9): New variable.
2019-10-14 18:25:31 +02:00
Maurice Brémond
06e1239502
gnu: mumps: Build and install shared libraries.
* gnu/packages/patches/mumps-shared-libseq.patch,
gnu/packages/patches/mumps-shared-mumps.patch,
gnu/packages/patches/mumps-shared-pord.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/maths.scm (mumps)[source](patches): Add them.
[arguments]: In 'configure' phase, adjust "Makefile.inc" for shared
library support.  In 'install' phase, install libmpiseq.so when it
exists.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2019-10-14 18:25:31 +02:00
Maurice Brémond
5dbc79eb60
gnu: mumps: Update to 5.2.1.
* gnu/packages/maths.scm (mumps): Update to 5.2.1.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2019-10-14 18:25:31 +02:00
Ricardo Wurmus
b06cdce923
gnu: Add r-velocyto.
* gnu/packages/bioinformatics.scm (r-velocyto): New variable.
2019-10-14 18:22:46 +02:00
Ricardo Wurmus
40be965e28
gnu: Add r-phastcons100way-ucsc-hg19.
* gnu/packages/bioconductor.scm (r-phastcons100way-ucsc-hg19): New variable.
2019-10-14 18:09:37 +02:00
Pierre Neidhardt
14db074e28
gnu: Add emacs-sly-package-inferred.
* gnu/packages/emacs-xyz.scm (emacs-sly-package-inferred): New variable.
2019-10-14 18:00:33 +02:00
Pierre Neidhardt
de36efc2e0
gnu: Add emacs-sly-macrostep.
* gnu/packages/emacs-xyz.scm (emacs-sly-macrostep): New variable.
2019-10-14 18:00:32 +02:00
Pierre Neidhardt
b0cf64c0bc
gnu: Add emacs-sly-named-readtables.
* gnu/packages/emacs-xyz.scm (emacs-sly-named-readtables): New variable.
2019-10-14 18:00:32 +02:00
Pierre Neidhardt
6078c0043d
gnu: emacs-sly-asdf: Update to 20191013.
* gnu/packages/emacs-xyz.scm (emacs-sly-asdf): Update to 20191013.
2019-10-14 18:00:32 +02:00
Stephen Webber
534610d820
gnu: Add emacs-dimmer.
* gnu/packages/emacs-xyz.scm (emacs-dimmer): New variable.
2019-10-14 17:19:54 +02:00
Tobias Geerinckx-Rice
8c26b18453
gnu: sudo: Update to 1.8.28 [fixes CVE-2019-14287].
* gnu/packages/admin.scm (sudo): Update to 1.8.28.
2019-10-14 17:14:46 +02:00
Tobias Geerinckx-Rice
41cc799357
gnu: r-fields: Use HTTPS home-page.
* gnu/packages/cran.scm (r-fields)[home-page]: Use HTTPS.
2019-10-14 17:14:45 +02:00
Tobias Geerinckx-Rice
e96a56f62d
gnu: r-fields: Update to 9.9.
* gnu/packages/cran.scm (r-fields): Update to 9.9.
2019-10-14 17:14:45 +02:00
Tobias Geerinckx-Rice
f64cd5d1ac
gnu: sqitch: Update to 1.0.0.
* gnu/packages/databases.scm (sqitch): Update to 1.0.0.
2019-10-14 17:14:45 +02:00
Tobias Geerinckx-Rice
8fc3a337ab
gnu: network-manager-applet: Update to 1.8.24.
* gnu/packages/gnome.scm (network-manager-applet): Update to 1.8.24.
2019-10-14 17:14:45 +02:00
Tobias Geerinckx-Rice
b55e328941
gnu: poedit: Update to 2.2.4.
* gnu/packages/poedit.scm (poedit): Update to 2.2.4.
2019-10-14 17:14:45 +02:00
Tobias Geerinckx-Rice
7f07dd7f0e
gnu: perl-cache-fastmmap: Update to 1.48.
* gnu/packages/perl.scm (perl-cache-fastmmap): Update to 1.48.
2019-10-14 17:14:45 +02:00
Mathieu Othacehe
396b05f04e
gexp: Use cross extensions when cross-compiling.
* guix/gexp.scm (load-path-expression): Use ungexp-splicing instead of
ungexp-native-splicing so that the cross extensions are used when target is
set.
2019-10-14 09:59:04 +02:00
Brian Leung
92f92a0fc8
gnu: emacs-unpackaged-el: Update to 0-3.746801a.
* gnu/packages/emacs-xyz.scm (emacs-unpackaged-el): Update to 0-3.746801a.
2019-10-14 00:30:29 -07:00
Brian Leung
34d2367dc1
gnu: emacs-ivy-rich: Update to 0.1.4-2.7a667b1.
* gnu/packages/emacs-xyz.scm (emacs-ivy-rich): Update to 0.1.4-2.7a667b1.
2019-10-14 00:30:24 -07:00
Eric Bavier
bd04fe8786
gnu: HandBrake: Update to 1.2.2.
* gnu/packages/video.scm (handbrake): Update to 1.2.2.
2019-10-13 22:54:12 -05:00
Eric Bavier
136e3b392b
gnu: stress-make: Fix build and update.
* gnu/packages/debug.scm (stress-make)[version]: Update to latest upstream
commit.  Bump revision.  Use 'git-version'.
[source]: Update url.  Use 'git-file-name'.
[home-page]: Update url likewise.
[arguments]: Add 'setup-go' phase.
[license]: Update license file name.
2019-10-13 22:17:38 -05:00
Tobias Geerinckx-Rice
217f22d16a
gnu: xwd: Fix typo in description.
* gnu/packages/xorg.scm (xwd)[description]: Fix typo.
2019-10-14 00:40:30 +02:00
Tobias Geerinckx-Rice
509551c2a8
gnu: xwininfo: Update to 1.1.5.
* gnu/packages/xorg.scm (xwininfo): Update to 1.1.5.
2019-10-14 00:32:32 +02:00
Tobias Geerinckx-Rice
9cdf9468dd
gnu: emacs-nhexl-mode: Use HTTPS home page.
* gnu/packages/emacs-xyz.scm (emacs-nhexl-mode)[home-page]: Use HTTPS.
2019-10-14 00:32:32 +02:00
Tobias Geerinckx-Rice
d915065bac
gnu: emacs-nhexl-mode: Update to 1.3.
* gnu/packages/emacs-xyz.scm (emacs-nhexl-mode): Update to 1.3.
2019-10-14 00:32:32 +02:00
Tobias Geerinckx-Rice
fc319fde1a
gnu: emacs-darkroom: Update to 0.2.
* gnu/packages/emacs-xyz.scm (emacs-darkroom): Update to 0.2.
2019-10-14 00:32:32 +02:00
Tobias Geerinckx-Rice
d3dfeaa8fe
gnu: emacs-let-alist: Update to 1.0.6.
* gnu/packages/emacs-xyz.scm (emacs-let-alist): Update to 1.0.6.
2019-10-14 00:32:32 +02:00
Tobias Geerinckx-Rice
d0b9fc9a89
gnu: emacs-csv-mode: Use HTTPS.
* gnu/packages/emacs-xyz.scm (emacs-csv-mode)[source, home-page]: Use HTTPS.
2019-10-14 00:32:31 +02:00
Tobias Geerinckx-Rice
80fd379784
gnu: emacs-csv-mode: Update to 1.9.
* gnu/packages/emacs-xyz.scm (emacs-csv-mode): Update to 1.9.
2019-10-14 00:32:31 +02:00
Tobias Geerinckx-Rice
5aa5187128
gnu: emacs-load-relative: Update to 1.3.1.
* gnu/packages/emacs-xyz.scm (emacs-load-relative): Update to 1.3.1.
2019-10-14 00:32:31 +02:00
Tobias Geerinckx-Rice
ca49db2735
gnu: emacs-debbugs: Update to 0.20.
* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.20.
2019-10-14 00:32:31 +02:00
Tobias Geerinckx-Rice
a201b0973e
gnu: starman: Update to 0.4015.
* gnu/packages/web.scm (starman): Update to 0.4015.
2019-10-14 00:32:31 +02:00
David Wilson
1c463524c8
gnu: Add playerctl.
* gnu/packages/music.scm (playerctl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-10-14 00:08:33 +02:00
Kyle Meyer
ff73bbf410
gnu: git-annex: Update to 7.20191009.
* gnu/packages/haskell-apps.scm (git-annex): Update to 7.20191009.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-10-14 00:08:10 +02:00
Ludovic Courtès
efa8fddabe
gnu: commencement: Use 'package-with-explicit-inputs' for Hurd packages.
* gnu/packages/commencement.scm (with-boot0): New procedure.
(gnumach-headers-boot0, mig-boot0)
(hurd-headers-boot0, hurd-minimal-boot0)
(hurd-core-headers-boot0): Use it instead of 'package-with-explicit-inputs'.
2019-10-14 00:08:10 +02:00
Ludovic Courtès
8f417ed280
gnu: commencement: Further optimize the package object graph.
For a package like:

  (define-public xxx
    (package
      (inherit (@ (gnu packages base) coreutils))
      (name "xxx")
      (inputs (@ (gnu packages commencement) %final-inputs))
      (native-inputs '())
      (propagated-inputs '())
      (arguments '(#:implicit-inputs? #f))))

this reduces the package object graph from 176 nodes (1852 edges) to 113
nodes (1114 edges).

The number of 'add-data-to-store' calls in "guix build coreutils -nd"
drops from 2045 to 1301, and the number of memoization tables drops from
102 to 40.

"guix build libreoffice -nd" goes from 2.40s to 2.27s.

* gnu/packages/commencement.scm (with-boot4): New variable.
(guile-final, glibc-utf8-locales-final): Use it.
(with-boot4, with-boot5): New variable.
(gnu-make-final): Rewrite to avoid 'package-with-explicit-inputs'.
(coreutils-final): Use 'with-boot5' instead of
'package-with-explicit-inputs'.
(grep-final): Likewise.
(with-boot6): New variable.
(sed-final, %final-inputs): Use it.
2019-10-14 00:08:10 +02:00
Ludovic Courtès
f618134e4c
build-system/gnu: 'package-with-explicit-inputs' uses 'package-mapping'.
* guix/build-system/gnu.scm (package-with-explicit-inputs): Rename to...
(package-with-explicit-inputs/deprecated): ... this.
(package-with-explicit-inputs*): New procedure.
(package-with-explicit-inputs): Define as a 'case-lambda*'.
2019-10-14 00:08:10 +02:00
Marius Bakke
64855281c1
gnu: librsvg: Update to 2.46.0.
* gnu/packages/gnome.scm (librsvg-next): Update to 2.46.0.
[arguments]: Patch SHELL in "po/Makefile.in.in".
[native-inputs]: Replace RUST-1.27 with RUST-1.34.
2019-10-13 22:49:16 +02:00
Marius Bakke
e436379c94
gnu: expat: Replace with 2.2.9 [fixes CVE-2019-15903].
* gnu/packages/xml.scm (expat-2.2.9): New variable.
(expat)[replacement]: New field.
2019-10-13 22:49:16 +02:00
Marius Bakke
24496210ea
gnu: libgcrypt: Replace with 1.8.5 [fixes CVE-2019-13627].
* gnu/packages/gnupg.scm (libgcrypt-1.8.5): New variable.
(libgcrypt)[replacement]: New field.
2019-10-13 22:49:16 +02:00
Marius Bakke
046915dead
gnu: curl: Replace with 7.66.0 [fixes CVE-2019-5481, CVE-2019-5482].
* gnu/packages/curl.scm (curl-7.66.0): New variable.
(curl)[replacement]: New field.
2019-10-13 22:49:16 +02:00
Marius Bakke
cb867883ea
gnu: nghttp2: Replace with 1.39.2 [fixes CVE-2019-9511, CVE-2019-9513].
* gnu/packages/web.scm (nghttp2-1.39.2): New variable.
(nghttp2)[replacement]: New field.
2019-10-13 22:49:16 +02:00
Marius Bakke
d6718086f8
gnu: OpenSSL@1.0: Replace with 1.0.2t [fixes CVE-2019-1547, CVE-2019-1563].
* gnu/packages/tls.scm (openssl-1.0.2t): New variable.
(openssl-1.0)[replacement]: New field.
2019-10-13 22:49:16 +02:00
Oleg Pykhalov
0475c88d6f
gnu: Add emacs-forge.
* gnu/packages/emacs-xyz.scm (emacs-forge): New variable.
2019-10-13 22:29:42 +03:00
Oleg Pykhalov
735a972eae
gnu: emacs-closql: Update to 1.0.0-1.70b98db.
* gnu/packages/emacs-xyz.scm (emacs-closql): Update to 1.0.0-1.70b98db.
2019-10-13 22:29:42 +03:00