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Author SHA1 Message Date
Ricardo Wurmus
9a5901e0ad
gnu: r-spatstat-geom: Update to 2.2-2. 
* gnu/packages/cran.scm (r-spatstat-geom): Update to 2.2-2.
 2021-07-28 22:26:53 +02:00
Ricardo Wurmus
7b41c93061
gnu: r-hardhat: Update to 0.1.6. 
* gnu/packages/cran.scm (r-hardhat): Update to 0.1.6.
 2021-07-28 22:26:53 +02:00
Ricardo Wurmus
35f9a754d8
gnu: r-isoband: Update to 0.2.5. 
* gnu/packages/cran.scm (r-isoband): Update to 0.2.5.
 2021-07-28 22:26:53 +02:00
Ricardo Wurmus
49979bf735
gnu: r-seewave: Update to 2.1.8. 
* gnu/packages/cran.scm (r-seewave): Update to 2.1.8.
 2021-07-28 22:26:53 +02:00
Ricardo Wurmus
03e4676138
gnu: r-showtext: Update to 0.9-3. 
* gnu/packages/cran.scm (r-showtext): Update to 0.9-3.
 2021-07-28 22:26:53 +02:00
Ricardo Wurmus
73871946a1
gnu: r-sysfonts: Update to 0.8.4. 
* gnu/packages/cran.scm (r-sysfonts): Update to 0.8.4.
 2021-07-28 22:26:53 +02:00
Ricardo Wurmus
c1919dacf4
gnu: r-styler: Update to 1.5.1. 
* gnu/packages/cran.scm (r-styler): Update to 1.5.1.
 2021-07-28 22:26:53 +02:00
Ricardo Wurmus
b21351870a
gnu: r-rttf2pt1: Update to 1.3.9. 
* gnu/packages/cran.scm (r-rttf2pt1): Update to 1.3.9.
 2021-07-28 22:26:53 +02:00
Ricardo Wurmus
d5e5809b94
gnu: r-adegenet: Update to 2.1.4. 
* gnu/packages/cran.scm (r-adegenet): Update to 2.1.4.
 2021-07-28 22:26:52 +02:00
Ricardo Wurmus
c84a2c1209
gnu: r-wk: Update to 0.5.0. 
* gnu/packages/cran.scm (r-wk): Update to 0.5.0.
 2021-07-28 22:26:52 +02:00
Ricardo Wurmus
d57de3da9c
gnu: r-compositions: Update to 2.0-2. 
* gnu/packages/cran.scm (r-compositions): Update to 2.0-2.
 2021-07-28 22:26:52 +02:00
Ricardo Wurmus
f04f40880c
gnu: r-parallelly: Update to 1.27.0. 
* gnu/packages/cran.scm (r-parallelly): Update to 1.27.0.
 2021-07-28 22:26:52 +02:00
Ricardo Wurmus
a6044a7573
gnu: r-rgl: Update to 0.107.10. 
* gnu/packages/cran.scm (r-rgl): Update to 0.107.10.
[propagated-inputs]: Remove r-manipulatewidget and r-shiny.
 2021-07-28 22:26:52 +02:00
Ricardo Wurmus
c210531551
gnu: r-afex: Update to 1.0-1. 
* gnu/packages/cran.scm (r-afex): Update to 1.0-1.
 2021-07-28 22:26:52 +02:00
Ricardo Wurmus
40648a1e20
gnu: r-credentials: Update to 1.3.1. 
* gnu/packages/cran.scm (r-credentials): Update to 1.3.1.
 2021-07-28 22:26:52 +02:00
Ricardo Wurmus
9e56bb33d5
gnu: r-sjplot: Update to 2.8.9. 
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.9.
[propagated-inputs]: Add r-datawizard.
 2021-07-28 22:26:52 +02:00
Ricardo Wurmus
ce8738a194
gnu: r-performance: Update to 0.7.3. 
* gnu/packages/cran.scm (r-performance): Update to 0.7.3.
[propagated-inputs]: Add r-datawizard.
 2021-07-28 22:26:52 +02:00
Ricardo Wurmus
7a8081f23e
gnu: r-bayestestr: Update to 0.10.5. 
* gnu/packages/cran.scm (r-bayestestr): Update to 0.10.5.
[propagated-inputs]: Add r-datawizard.
 2021-07-28 22:26:51 +02:00
Ricardo Wurmus
4590f8b338
gnu: r-glmmtmb: Update to 1.1.2. 
* gnu/packages/cran.scm (r-glmmtmb): Update to 1.1.2.
 2021-07-28 22:26:51 +02:00
Ricardo Wurmus
0af4e95b33
gnu: r-survey: Update to 4.1-1. 
* gnu/packages/cran.scm (r-survey): Update to 4.1-1.
 2021-07-28 22:26:51 +02:00
Ricardo Wurmus
dce011239f
gnu: r-doby: Update to 4.6.11. 
* gnu/packages/cran.scm (r-doby): Update to 4.6.11.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
c633e5f40a
gnu: r-flextable: Update to 0.6.7. 
* gnu/packages/cran.scm (r-flextable): Update to 0.6.7.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
8816d7e130
gnu: r-officer: Update to 0.3.19. 
* gnu/packages/cran.scm (r-officer): Update to 0.3.19.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
3bc970802b
gnu: r-renv: Update to 0.14.0. 
* gnu/packages/cran.scm (r-renv): Update to 0.14.0.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
db54fbe2b1
gnu: r-rastervis: Update to 0.50.3. 
* gnu/packages/cran.scm (r-rastervis): Update to 0.50.3.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
1ba8c81f97
gnu: r-vim: Update to 6.1.1. 
* gnu/packages/cran.scm (r-vim): Update to 6.1.1.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
76211cbc27
gnu: r-utf8: Update to 1.2.2. 
* gnu/packages/cran.scm (r-utf8): Update to 1.2.2.
[native-inputs]: Add r-rmarkdown.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
165ecfb477
gnu: r-cli: Update to 3.0.1. 
* gnu/packages/cran.scm (r-cli): Update to 3.0.1.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
57f04c64bc
gnu: r-laplacesdemon: Update to 16.1.6. 
* gnu/packages/cran.scm (r-laplacesdemon): Update to 16.1.6.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
efaa549993
gnu: r-fastmatch: Update to 1.1-3. 
* gnu/packages/cran.scm (r-fastmatch): Update to 1.1-3.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
e1a57fcdfa
gnu: r-jpeg: Update to 0.1-9. 
* gnu/packages/cran.scm (r-jpeg): Update to 0.1-9.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
16c3ebaf14
gnu: r-rvest: Update to 1.0.1. 
* gnu/packages/cran.scm (r-rvest): Update to 1.0.1.
 2021-07-28 22:26:23 +02:00
Ricardo Wurmus
24ad9180fe
gnu: r-ggpp: Update to 0.4.1. 
* gnu/packages/cran.scm (r-ggpp): Update to 0.4.1.
[propagated-inputs]: Remove r-generics and r-plyr.
 2021-07-28 22:26:22 +02:00
Ricardo Wurmus
55a8d2f369
gnu: r-googlesheets4: Update to 1.0.0. 
* gnu/packages/cran.scm (r-googlesheets4): Update to 1.0.0.
[propagated-inputs]: Remove r-lifecycle; add r-cli.
 2021-07-28 22:26:22 +02:00
Ricardo Wurmus
6e27f274b2
gnu: Add r-lobstr. 
* gnu/packages/cran.scm (r-lobstr): New variable.
 2021-07-28 22:26:22 +02:00
Ricardo Wurmus
f39deacd21
gnu: Add r-datawizard. 
* gnu/packages/cran.scm (r-datawizard): New variable.
 2021-07-28 22:26:22 +02:00
Lars-Dominik Braun
9ac9bc6051
gnu: r-with-tests: Hardcode path to coreutils’ rm 
When running R in a container like this

	guix environment --no-cwd -C --ad-hoc r-minimal -- Rscript -e 'Sys.timezone()'

it would print an additional line

	sh: rm: command not found

before exiting.

* gnu/packages/statistics.scm (r-with-tests) [#:phases]: Add substitute*
to patch call to `rm` and rename phase to reflect what it does now.
 2021-07-28 22:26:19 +02:00
Ricardo Wurmus
042b6971d7
gnu: Add python-modin. 
* gnu/packages/python-science.scm (python-modin): New variable.
 2021-07-28 20:31:06 +02:00
Ricardo Wurmus
251bfbcfaa
gnu: Add python-distributed. 
* gnu/packages/python-science.scm (python-distributed): New variable.
 2021-07-28 20:31:06 +02:00
Ricardo Wurmus
41431282e2
gnu: Add python-zict. 
* gnu/packages/python-xyz.scm (python-zict): New variable.
 2021-07-28 20:31:06 +02:00
Ricardo Wurmus
45ee09dc96
gnu: Add python-heapdict. 
* gnu/packages/python-xyz.scm (python-heapdict): New variable.
 2021-07-28 20:31:06 +02:00
Ricardo Wurmus
532cfc5bd2
gnu: python-pyarrow: Fix parquet support. 
Co-authored-by: Phil Beadling <phil@beadling.co.uk>.

* gnu/packages/databases.scm (python-pyarrow)[arguments]: Add phases
patch-cmake-variables, patch-parquet-library, and set-PYARROW_WITH_PARQUET.
[propagated-inputs]: Add "include" output of apache-arrow package.
 2021-07-28 20:31:06 +02:00
Ricardo Wurmus
3a150e9f12
gnu: python-pandas: Update to 1.3.0. 
* gnu/packages/python-science.scm (python-pandas): Update to 1.3.0.
[arguments]: Adjust check phase.
 2021-07-28 20:31:06 +02:00
Ricardo Wurmus
242221e380
gnu: python-dask: Update to 2021.7.1. 
* gnu/packages/python-xyz.scm (python-dask): Update to 2021.7.1.
[arguments]: Do not skip test_shuffle.
 2021-07-28 20:31:05 +02:00
Ricardo Wurmus
f01d4b197a
gnu: python-partd: Update to 1.2.0. 
* gnu/packages/python-xyz.scm (python-partd): Update to 1.2.0.
 2021-07-28 20:31:05 +02:00
Ricardo Wurmus
27c6cab2c6
gnu: python-numexpr: Update to 2.7.3. 
* gnu/packages/python-xyz.scm (python-numexpr): Update to 2.7.3.
 2021-07-28 20:31:05 +02:00
Ricardo Wurmus
145296dbcb
gnu: python-cloudpickle: Update to 1.6.0. 
* gnu/packages/python-xyz.scm (python-cloudpickle-testpkg): New variable.
(python-cloudpickle): Update to 1.6.0; inherit from
python-cloudpickle-testpkg.
[source]: Fetch from git repository.
[native-inputs]: Add python-cloudpickle-testpkg; replace python-tornado with
python-tornado-6.
 2021-07-28 20:31:05 +02:00
Ricardo Wurmus
2422fbf6b2
gnu: python2-cloudpickle: Override version, source, and native-inputs. 
* gnu/packages/python-xyz.scm (python2-cloudpickle)[version]: Explicitly set
to 1.3.0.
[source]: Copy from base package.
[native-inputs]: Do not inherit; copy.
 2021-07-28 20:31:05 +02:00
Ricardo Wurmus
c486a61c27
gnu: cmake: Update to 3.21.1. 
* gnu/packages/cmake.scm (cmake): Update to 3.21.1.
[arguments]: Skip one more test.
 2021-07-28 20:31:05 +02:00
Efraim Flashner
c20c9e1685
gnu: julia-distances: Update flakey tests. 
* gnu/packages/julia-xyz.scm (julia-distances)[arguments]: Adjust the
custom 'skip-flakey-tests phase.
 2021-07-28 16:05:33 +03:00