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Author SHA1 Message Date
Ricardo Wurmus
c358b5d418
gnu: Add r-assertive-models. 
* gnu/packages/cran.scm (r-assertive-models): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
905aa46ae5
gnu: Add r-assertive-matrices. 
* gnu/packages/cran.scm (r-assertive-matrices): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
2da2d2f605
gnu: Add r-assertive-sets. 
* gnu/packages/cran.scm (r-assertive-sets): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
dac9c1f604
gnu: Add r-assertive-numbers. 
* gnu/packages/cran.scm (r-assertive-numbers): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
4b2d17edaa
gnu: Add r-assertive-properties. 
* gnu/packages/cran.scm (r-assertive-properties): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
8004bb2451
gnu: Add r-assertive-base. 
* gnu/packages/cran.scm (r-assertive-base): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
a536c7c9ad
gnu: Add r-rmpfr. 
* gnu/packages/cran.scm (r-rmpfr): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
1ab5160434
gnu: Add r-gmp. 
* gnu/packages/cran.scm (r-gmp): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
dfd09f7bad
gnu: Add r-bigrquery. 
* gnu/packages/cran.scm (r-bigrquery): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
ad6fea1690
gnu: Add r-ontologyindex. 
* gnu/packages/cran.scm (r-ontologyindex): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
9170eb7f1f
gnu: Add r-rapidjsonr. 
* gnu/packages/cran.scm (r-rapidjsonr): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
e7176ac5bd
gnu: Add r-pixmap. 
* gnu/packages/cran.scm (r-pixmap): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
895efece37
gnu: Add r-strucchange. 
* gnu/packages/cran.scm (r-strucchange): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
d28be7b76b
gnu: Add r-als. 
* gnu/packages/cran.scm (r-als): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
9401f56b81
gnu: Add r-chemometricswithr. 
* gnu/packages/cran.scm (r-chemometricswithr): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
25861356ed
gnu: Add r-iso. 
* gnu/packages/cran.scm (r-iso): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
00436e2cac
gnu: Add r-nnls. 
* gnu/packages/cran.scm (r-nnls): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
2871b670a8
gnu: Add r-kohonen. 
* gnu/packages/cran.scm (r-kohonen): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
d0eb09a134
gnu: Add r-grimport. 
* gnu/packages/cran.scm (r-grimport): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
7eec973e81
gnu: Add r-tractor-base. 
* gnu/packages/cran.scm (r-tractor-base): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
b98662c53a
gnu: Add r-reportr. 
* gnu/packages/cran.scm (r-reportr): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
cb03d6c6f3
gnu: Add r-ore. 
* gnu/packages/cran.scm (r-ore): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
6e09f50613
gnu: Add r-shades. 
* gnu/packages/cran.scm (r-shades): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
f79e63a571
gnu: Add r-rnifti. 
* gnu/packages/cran.scm (r-rnifti): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
b2e777b27c
gnu: Add r-tfmpvalue. 
* gnu/packages/cran.scm (r-tfmpvalue): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
adcd0cc87e
gnu: Add r-splitstackshape. 
* gnu/packages/cran.scm (r-splitstackshape): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
5f0fbfc0ad
gnu: Add r-lassopv. 
* gnu/packages/cran.scm (r-lassopv): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
3d62d98e69
gnu: Add r-flare. 
* gnu/packages/cran.scm (r-flare): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
029425cbce
gnu: Add r-vbsr. 
* gnu/packages/cran.scm (r-vbsr): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
5574cb812a
gnu: Add r-rpostgresql. 
* gnu/packages/cran.scm (r-rpostgresql): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
3088b3fc5b
gnu: Add r-rspectra. 
* gnu/packages/cran.scm (r-rspectra): New variable.
 2019-01-09 15:43:45 +01:00
Ludovic Courtès
804b9b18ac
build-system/asdf: 'package-with-build-system' accesses inputs lazily. 
Fixes a bug whereby we would, at the top-level (while evaluation
lisp.scm package definitions), attempt to access package inputs.
Because of circular dependencies, this could lead to unbound variables
as reported by Arun Isaac <arunisaac@systemreboot.net> at
<https://debbugs.gnu.org/cgi/bugreport.cgi?bug=33801#56>.

* guix/build-system/asdf.scm (package-with-build-system)[transform]
(new-propagated-inputs): Turn into a procedure.
Adjust user accordingly.
 2019-01-09 15:01:40 +01:00
Ludovic Courtès
6e54e488c6
self: Drop support for Guix < 0.15 on Guile 2.0. 
* guix/self.scm (false-if-wrong-guile, package-for-guile): Remove.
(specification->package): Remove "guile2.0-" variants.
(compiled-guix): #:guile-for-build defaults to (default-guile).
Use 'specification->package' instead of 'package-for-guile'.
(guile-for-build): Remove.
(guix-derivation): Use 'default-guile' instead of 'guile-for-build'.
Check whether we're running on Guile 2.0 with PULL-VERSION < 1.
 2019-01-09 14:47:53 +01:00
Ludovic Courtès
76832d3420
Remove most uses of the _IO*F constants. 
These constants, for use with 'setvbuf', were deprecated in Guile 2.2
and disappeared in Guile 3.0.  Here we keep these constants in
build-side code where removing them is not feasible.

* guix/build/download-nar.scm (download-nar): Adjust 'setvbuf' calls to
the Guile 2.2+ API.
* guix/build/download.scm (open-socket-for-uri): Likewise.
(open-connection-for-uri, url-fetch): Likewise.
* guix/build/make-bootstrap.scm (make-stripped-libc): Likewise.
* guix/build/union.scm (setvbuf) [guile-2.0]: New conditional wrapper.
(union-build): Adjust to new API.
* guix/ftp-client.scm (ftp-open, ftp-list, ftp-retr): Likewise.
* guix/http-client.scm (http-fetch): Likewise.
* guix/inferior.scm (proxy): Likewise.
* guix/scripts/substitute.scm (fetch, http-multiple-get): Likewise.
* guix/self.scm (compiled-modules): Likewise.
* guix/ssh.scm (remote-daemon-channel, store-import-channel)
(store-export-channel): Likewise.
* guix/ui.scm (initialize-guix): Likewise.
* tests/publish.scm (http-get-port): Likewise.
* guix/store.scm (%newlines): Adjust comment.
 2019-01-09 14:47:53 +01:00
Ludovic Courtès
c3d9bca48a
download: Remove Guile 2.0 workaround. 
* guix/build/download.scm: Remove Guile 2.0 workaround.
 2019-01-09 14:47:53 +01:00
Ludovic Courtès
a65177a657
maint: Remove 'cond-expand' forms for Guile 2.0. 
Note: Leave 'cond-expand' forms used in the build-side modules that can
run on %BOOTSTRAP-GUILE, which is currently Guile 2.0.

* guix/build/compile.scm: Move 'use-modules' clause from 'cond-expand'
to 'define-module' form.
(%default-optimizations): Remove 'cond-expand'.
* guix/build/download.scm (tls-wrap): Remove 'cond-expand'.
* guix/build/syscalls.scm: Remove 'cond-expand' form around
'%set-automatic-finalization-enabled?!' and
'without-automatic-finalization'.
* guix/inferior.scm (port->inferior): Remove 'cond-expand'.
* guix/scripts/pack.scm (wrapped-package)[build]: Remove 'cond-expand'.
* guix/status.scm (build-event-output-port): Remove 'cond-expand'.
* guix/store.scm (open-inet-socket): Remove 'cond-expand'.
* guix/ui.scm (install-locale): Remove 'cond-expand'.
* tests/status.scm ("current-build-output-port, UTF-8 + garbage"):
Remove 'cond-expand'.
* tests/store.scm ("current-build-output-port, UTF-8 + garbage"):
Remove 'cond-expand'.
 2019-01-09 14:47:53 +01:00
Ludovic Courtès
0991fd5336
build: Require Guile 2.2. 
* configure.ac: Require Guile 2.2.
* README: Adjust accordingly.
* doc/guix.texi (Requirements): Likewise.
* gnu/packages/package-management.scm (guile2.0-guix): Deprecate.
(guix-minimal): Inherit from GUIX, not from GUILE2.0-GUIX.
 2019-01-09 14:47:53 +01:00
Ricardo Wurmus
6df4d8338d
doc: Recommend using the installer script. 
* doc/guix.texi (Installation): Make it clear that the installer script is the
recommended, easy way to install Guix.
 2019-01-08 18:49:13 +01:00
Ludovic Courtès
a21a906fcd
pull: Document '--system'. 
Fixes <https://bugs.gnu.org/34010>.
Reported by Alex Kost <alezost@gmail.com>.

This is a followup to 5923102f7b.

* guix/scripts/pull.scm (show-help): Add '--system'.
 2019-01-08 18:38:15 +01:00
Ludovic Courtès
08fdee3911
self: Compress Info files. 
Fixes <https://bugs.gnu.org/33993>.
Reported by Adonay Felipe Nogueira <adfeno@hyperbola.info>.

* guix/self.scm (info-manual): Compress Info files.
 2019-01-08 18:38:15 +01:00
Ludovic Courtès
c108c46fb4
build-self: Spin only on TTYs. 
* build-aux/build-self.scm (build-program): Spin only when 'isatty?'
returns true.
 2019-01-08 18:38:15 +01:00
Eric Bavier
fefcb122ac
gnu: dvdisaster: Run regression tests. 
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Remove #:tests? argument.
Add 'check' phase.
 2019-01-08 09:09:31 -06:00
Eric Bavier
98b0ec7fa6
gnu: dvdisaster: Install desktop file. 
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Add 'install-desktop phase.
 2019-01-08 09:09:25 -06:00
Clément Lassieur
627e6d8c11
gnu: prosody: Update to 0.11.1. 
* gnu/packages/messaging.scm (prosody): Update to 0.11.1.
[arguments]: Replace "Makefile" with "GNUmakefile".  Change "5.1" to "5.2".
Explain why there are no tests.
[inputs]: Replace lua-5.1, lua5.1-bitop, lua5.1-expat, lua5.1-socket,
lua5.1-filesystem, lua5.1-sec with lua-5.2, lua5.2-bitop, lua5.2-expat,
lua5.2-socket, lua5.2-filesystem, lua5.2-sec.
 2019-01-08 15:23:36 +01:00
Clément Lassieur
eb5b6c5777
gnu: Add lua5.2-sec. 
* gnu/packages/lua.scm (lua5.2-sec): New variable.
(make-lua-sec): New procedure.
(lua5.1-sec, lua5.2-sec): Call it.
 2019-01-08 15:23:36 +01:00
Clément Lassieur
d994325747
gnu: Add lua-filesystem and lua5.2-filesystem. 
* gnu/packages/lua.scm (lua-filesystem, lua5.2-filesystem): New variables.
(make-lua-filesystem): New procedure.
(lua-filesystem, lua5.1-filesystem, lua5.2-filesystem): Call it.
 2019-01-08 15:23:36 +01:00
Clément Lassieur
253aab77c5
gnu: Add lua5.2-socket. 
* gnu/packages/lua.scm (lua5.2-socket): New variable.
(make-lua-socket): New procedure.
(lua5.1-socket, lua5.2-socket): Call it.
 2019-01-08 15:23:36 +01:00
Clément Lassieur
7c97a0631e
gnu: Add lua5.2-expat. 
* gnu/packages/lua.scm (lua5.2-expat): New variable.
(make-lua-expat): New procedure.
(lua5.1-expat, lua5.2-expat): Call it.
 2019-01-08 15:23:36 +01:00
Efraim Flashner
580f33e119
gnu: criu: Update to 3.11. 
* gnu/packages/virtualization.scm (criu): Update to 3.11.
[arguments]: Add custom phase to patch python calls.
 2019-01-08 12:29:42 +02:00
Efraim Flashner
49fe965d28
gnu: criu: Fix building on armhf-linux. 
* gnu/packages/virtualization.scm (criu)[arguments]: Hardcode the arm
version in the Makefile.
 2019-01-08 12:29:40 +02:00