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Author SHA1 Message Date
Bruno Victal
a29754b4f1
gnu: docbook-xml: Fix permissions. 
* gnu/packages/docbook.scm (docbook-xml-5)
[arguments]: Remove unnecessary executable permissions.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-04-21 00:44:00 -04:00
Bruno Victal
f8d169e393
gnu: docbook-xml: Use copy-build-system. 
* gnu/packages/docbook.scm
(docbook-xml-5)[build-system]: Switch to copy-build-system.
[source][arguments]: Adapt to copy-build-system.
(docbook-xml)[arguments]: Remove.
[source]: Switch to url-fetch/zipbomb.
(docbook-xml-4.4)[source]: Switch to url-fetch/zipbomb.
(docbook-xml-4.3)[source]: Switch to url-fetch/zipbomb.
(docbook-xml-4.2)[source]: Switch to url-fetch/zipbomb.
(docbook-xml-4.1.2)[arguments]: Remove.
[source]: Switch to url-fetch/zipbomb.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-04-21 00:44:00 -04:00
John Kehayias
d3de59ddc7
gnu: python-numexpr: Update to 2.8.4. 
* gnu/packages/python-xyz.scm (python-numexpr): Update to 2.8.4.
 2023-04-20 15:46:33 -04:00
John Kehayias
dc26fd56f4
gnu: python-singledispatch: Update to 4.0.0. 
* gnu/packages/python-xyz.scm (python-singledispatch): Update to 4.0.0.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-pytest.
 2023-04-20 15:46:28 -04:00
John Kehayias
68e23d48f4
gnu: python-pytest-flakes: Update to 4.0.5. 
* gnu/packages/check.scm (python-pytest-flakes): Update to 4.0.5.
[native-inputs]: Remove python-pytest-cache.
 2023-04-20 15:46:25 -04:00
Andreas Enge
d0162466c6
Merge remote-tracking branch 'origin/master' into core-updates 2023-04-20 21:31:09 +02:00
Pierre Neidhardt
904b77e181
gnu: sbcl-quri: Update to 0.7.0. 
* gnu/packages/lisp-xyz.scm (sbcl-quri): Update to 0.7.0.
 2023-04-20 19:09:52 +02:00
Ludovic Courtès
6d32421f6e
gnu: python-unittest2: Adjust patch for Python 3.10 compatibility. 
* gnu/packages/patches/python-unittest2-python3-compat.patch: Add hunk
for Python 3.10 compatibility.
 2023-04-20 16:42:09 +02:00
Ludovic Courtès
c7d6fe2792
gnu: grpc: Build against 'abseil-cpp-cxxstd11'. 
* gnu/packages/rpc.scm (grpc)[inputs]: Use ABSEIL-CPP-CXXSTD11.
 2023-04-20 15:53:50 +02:00
Ludovic Courtès
4a51c88da8
gnu: abseil-cpp: Add variant for C++11. 
* gnu/packages/cpp.scm (abseil-cpp-for-c++-standard): New procedure.
(abseil-cpp-cxxstd17): Use it.
(abseil-cpp-cxxstd11): New variable.
 2023-04-20 15:53:43 +02:00
Navid Afkhami
61d1569575
gnu: Add r-tidygeocoder. 
* gnu/packages/cran.scm (r-tidygeocoder): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-04-20 11:46:11 +02:00
Andy Tai
fde70e3864
gnu: poke: Update to 3.1. 
* gnu/packages/engineering.scm (poke): Update to 3.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2023-04-20 11:24:23 +03:00
Maxim Cournoyer
c0ac055918
Revert "gnu: libsoup: Depend on Samba only on supported systems." 
This reverts commit 1344c3388a.  It was fixed
lower in the graph (in samba) on the master branch with commit
813d670b15 ("gnu: samba: Make the
python-cryptography input conditional.").
 2023-04-19 20:32:22 -04:00
Fabio Natali
c7918bbe98
gnu: borgmatic: Update to 1.7.12. 
* gnu/packages/backup.scm (borgmatic): Update to 1.7.12.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2023-04-19 20:24:29 -04:00
Sharlatan Hellseher
b7e9a89c58
gnu: stellarium: Update to 23.1 [fixes CVE-2023-28371]. 
Upstream introduced new versioning model <year>.<release>

* gnu/packages/astronomy.scm (stellarium): Update to 23.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2023-04-19 20:24:29 -04:00
Sharlatan Hellseher
c2eb598ec2
gnu: calcmysky: Update to 0.3.0. 
* gnu/packages/astronomy.scm (calcmysky): Update to 0.3.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2023-04-19 20:24:29 -04:00
Efraim Flashner
f2107eb221
gnu: gnutls: Extend test timeout on powerpc-linux. 
* gnu/packages/tls.scm (gnutls)[arguments]: When building for
powerpc-linux add a phase to extend the test timeout.
 2023-04-19 20:24:29 -04:00
Efraim Flashner
aa2eab0fd5
gnu: ultrastar-deluxe: Build with ffmpeg-5. 
* gnu/packages/games.scm (ultrastar-deluxe)[inputs]: Replace ffmpeg with
ffmpeg-5.
 2023-04-19 20:24:29 -04:00
Maxim Cournoyer
5513e8d5f4
gnu: guix: Update to 1.4.0-5.286cdf0. 
* gnu/packages/package-management.scm (guix): Update to 1.4.0-5.286cdf0.
 2023-04-19 20:24:28 -04:00
Maxim Cournoyer
3c3dbb0290
tests: guix-system: Drop the i686-linux desktop image test. 
Desktop these days means having Rust support (GNOME), which i686 currently
lacks on Guix.

* tests/guix-system.sh: Do not attempt to build the desktop.tmpl image for
i686-linux.
 2023-04-19 20:24:28 -04:00
John Kehayias
9c15743c4a
gnu: samba: Update to 4.18.1 [security fixes]. 
Fixes CVE-2023-0922 and CVE-2023-0614.

* gnu/packages/samba.scm (samba): Update to 4.18.1.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-04-19 20:24:28 -04:00
Maxim Cournoyer
2d33e6d6e8
gnu: samba: Make the python-cryptography input conditional. 
* gnu/packages/samba.scm (samba/pinned) [arguments]: Conditionally enable self tests
in configure phase.
[native-inputs]:  Conditionally add python-cryptography.

Reported-by: John Kehayias <john.kehayias@protonmail.com>
 2023-04-19 20:24:28 -04:00
Maxim Cournoyer
ed854ad8e6
tests: Fix texlive->guix-package test. 
The home page for the package had changed.

* tests/texlive.scm ("texlive->guix-package"): Match the home-page and
synopsis inexactly to avoid future similar breakages.
 2023-04-19 20:12:58 -04:00
Maxim Cournoyer
1b0a095a81
tests: Re-add debug output to a package tests. 
* tests/packages.scm ("fold-available-packages with/without cache"):
Re-introduce debugging output.
 2023-04-19 20:12:28 -04:00
Ricardo Wurmus
6834f24096
gnu: r-dmrseq: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.18.1.
 2023-04-19 20:12:28 -04:00
Ricardo Wurmus
f26cf1895b
gnu: r-beachmat: Update to 2.14.2. 
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.14.2.
 2023-04-19 20:12:28 -04:00
Ricardo Wurmus
cb85ea56a2
gnu: r-gdsfmt: Update to 1.34.1. 
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.34.1.
 2023-04-19 20:12:28 -04:00
Ricardo Wurmus
5ccd264893
gnu: r-ebimage: Update to 4.40.1. 
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.40.1.
 2023-04-19 20:12:27 -04:00
Ricardo Wurmus
d2485dde5b
gnu: r-enrichplot: Update to 1.18.4. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.18.4.
 2023-04-19 20:12:27 -04:00
Ricardo Wurmus
6d10745d6b
gnu: r-structuralvariantannotation: Update to 1.14.1. 
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.14.1.
 2023-04-19 20:12:27 -04:00
Ricardo Wurmus
ec37e00e90
gnu: r-rhdf5: Update to 2.42.1. 
* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.42.1.
 2023-04-19 20:12:27 -04:00
Efraim Flashner
610979ed3a
gnu: openmw-scenegraph: Fix build. 
* gnu/packages/graphics.scm (openmw-scenegraph)[outputs]: Only use 'out'
output.
[arguments]: Delete inherited 'copy-plugins phase.
 2023-04-19 20:12:27 -04:00
Efraim Flashner
5832699aea
gnu: repo2docker: Add missing inputs. 
* gnu/packages/jupyter.scm (repo2docker)[inputs]: Add python-iso8601,
python-chardet.
 2023-04-19 20:12:26 -04:00
Efraim Flashner
61ad934d90
gnu: kwin: Update skipped test list. 
* gnu/packages/kde-plasma.scm (kwin)[arguments]: Update custom 'check
phase with new list of skipped tests.
 2023-04-19 20:12:26 -04:00
Efraim Flashner
83cef4a4f1
gnu: kwin: Rewrite skipped tests to be more readable. 
* gnu/packages/kde-plasma.scm (kwin)[arguments]: Rewrite skipped tests
in custom 'check phase to be easier to read.
 2023-04-19 20:12:26 -04:00
Nicolas Goaziou
9cc7ff179d
gnu: emacs-osm: Do not mix home-page and origin. 
* gnu/packages/emacs-xyz.scm (emacs-osm)[source]<origin>: Do not use home-page
value as origin.
 2023-04-19 20:12:26 -04:00
Nicolas Goaziou
ae1f9b9c92
gnu: emacs-osm: Update to 0.11. 
* gnu/packages/emacs-xyz.scm (emacs-osm): Update to 0.11.
 2023-04-19 20:12:26 -04:00
Nicolas Goaziou
d02b17534a
gnu: emacs-marginalia: Update to 1.2. 
* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 1.2.
 2023-04-19 20:12:25 -04:00
Nicolas Goaziou
2f1b156d04
gnu: emacs-envrc: Add DIRENV as an input. 
* gnu/packages/emacs-xyz.scm (emacs-envrc)[arguments]<#:phases>: Set direnv
executable location.
<#:tests?, #:test-command>: Tentatively run tests, without success.  At least,
they do not complain "direnv" executable is nowhere to be found.
[inputs]: Add DIRENV.
 2023-04-19 20:12:25 -04:00
Nicolas Goaziou
e870caa018
gnu: emacs-envrc: Update to 0.5. 
* gnu/packages/emacs-xyz.scm (emacs-envrc): Update to 0.5.
 2023-04-19 20:12:25 -04:00
Nicolas Goaziou
6dc90a7a6f
gnu: emacs-cape: Update to 0.15. 
* gnu/packages/emacs-xyz.scm (emacs-cape): Update to 0.15.
 2023-04-19 20:12:24 -04:00
Nicolas Goaziou
3c0a466170
gnu: emacs-autothemer: Run tests. 
* gnu/packages/emacs-xyz.scm (emacs-autothemer)[arguments]: Run tests.
 2023-04-19 20:12:24 -04:00
Nicolas Goaziou
38b2122afb
gnu: emacs-autothemer: Update to 0.2.17. 
* gnu/packages/emacs-xyz.scm (emacs-autothemer): Update to 0.2.17.
 2023-04-19 20:12:24 -04:00
Matthieu Lemerre
79d5721a03
gnu: Add texlive-totpages. 
* gnu/packages/tex.scm (texlive-totpages): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2023-04-19 20:12:23 -04:00
Nicolas Goaziou
919a08b3d5
gnu: texlive-latex-lastpage: Replace with texlive-lastpage. 
* gnu/packages/tex.scm (texlive-lastpage): New variable.
(texlive-latex-lastpage): Deprecate variable.
 2023-04-19 20:12:23 -04:00
Nicolas Goaziou
f6fa6772e9
gnu: texlive-latex-totcount: Replace with texlive-totcount. 
* gnu/packages/tex.scm (texlive-totcount): New variable.
(texlive-latex-totcount): Deprecate package.
 2023-04-19 20:12:23 -04:00
Nicolas Goaziou
7644e4c090
gnu: texlive-latex-acronym: Replace with texlive-acronym. 
* gnu/packages/tex.scm (texlive-latex-acronym): Deprecate package.
(texlive-acronym): New variable.
 2023-04-19 20:12:23 -04:00
Nicolas Goaziou
e59ce41bf2
gnu: texlive-latex-bigfoot: Replace with texlive-bigfoot. 
* gnu/packages/tex.scm (texlive-bigfoot): New variable.
(texlive-latex-bigfoot): Deprecate package.
(texlive-pstool): Use new variable.
 2023-04-19 20:12:22 -04:00
Nicolas Goaziou
0c7e7e42e6
gnu: Add texlive-relsize. 
* gnu/packages/tex.scm (texlive-relsize): New variable.
 2023-04-19 20:12:22 -04:00
Nicolas Goaziou
0c50d0bda1
gnu: Add texlive-ncctools. 
* gnu/packages/tex.scm (texlive-ncctools): New variable.
 2023-04-19 20:12:22 -04:00