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Author SHA1 Message Date
Ricardo Wurmus
a5b43d7ace
gnu: r-parameters: Update to 0.21.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.21.0.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
86de3bd06e
gnu: r-terra: Update to 1.7-29. 
* gnu/packages/cran.scm (r-terra): Update to 1.7-29.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
c96ed127f6
gnu: r-batchtools: Update to 0.9.17. 
* gnu/packages/cran.scm (r-batchtools): Update to 0.9.17.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
c3480bb230
gnu: r-s2: Update to 1.1.3. 
* gnu/packages/cran.scm (r-s2): Update to 1.1.3.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
4112f16267
gnu: r-units: Update to 0.8-2. 
* gnu/packages/cran.scm (r-units): Update to 0.8-2.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
f10e101b46
gnu: r-epi: Update to 2.47.1. 
* gnu/packages/cran.scm (r-epi): Update to 2.47.1.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
e7c6893684
gnu: r-longdat: Update to 1.1.1. 
* gnu/packages/cran.scm (r-longdat): Update to 1.1.1.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
7e0db06005
gnu: r-rmpfr: Update to 0.9-2. 
* gnu/packages/cran.scm (r-rmpfr): Update to 0.9-2.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
f290020027
gnu: r-bigrquery: Update to 1.4.2. 
* gnu/packages/cran.scm (r-bigrquery): Update to 1.4.2.
[propagated-inputs]: Add r-cli and r-withr.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
26405096ab
gnu: r-ouch: Update to 2.19. 
* gnu/packages/cran.scm (r-ouch): Update to 2.19.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
acad588a3c
gnu: r-afex: Update to 1.3-0. 
* gnu/packages/cran.scm (r-afex): Update to 1.3-0.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
d3c2b0d0e9
gnu: r-fs: Update to 1.6.2. 
* gnu/packages/cran.scm (r-fs): Update to 1.6.2.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
0a43d0b919
gnu: r-tmb: Update to 1.9.4. 
* gnu/packages/cran.scm (r-tmb): Update to 1.9.4.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
9c1797abce
gnu: r-th-data: Update to 1.1-2. 
* gnu/packages/cran.scm (r-th-data): Update to 1.1-2.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
b7047d045d
gnu: r-targets: Update to 1.0.0. 
* gnu/packages/cran.scm (r-targets): Update to 1.0.0.
 2023-04-29 20:28:09 +02:00
Ricardo Wurmus
92182dd404
gnu: r-cmplot: Update to 4.3.1. 
* gnu/packages/cran.scm (r-cmplot): Update to 4.3.1.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
7ae99d8446
gnu: r-nodbi: Update to 0.9.3. 
* gnu/packages/cran.scm (r-nodbi): Update to 0.9.3.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
207d51639e
gnu: r-rjags: Update to 4-14. 
* gnu/packages/cran.scm (r-rjags): Update to 4-14.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
134b94c432
gnu: r-zip: Update to 2.3.0. 
* gnu/packages/cran.scm (r-zip): Update to 2.3.0.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
20d775f622
gnu: r-tinytex: Update to 0.45. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.45.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
f471eb86c3
gnu: r-vctrs: Update to 0.6.2. 
* gnu/packages/cran.scm (r-vctrs): Update to 0.6.2.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
71af4ebe56
gnu: r-xfun: Update to 0.39. 
* gnu/packages/cran.scm (r-xfun): Update to 0.39.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
81b339bb00
gnu: r-processx: Update to 3.8.1. 
* gnu/packages/cran.scm (r-processx): Update to 3.8.1.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
2ee7d66973
gnu: r-xts: Update to 0.13.1. 
* gnu/packages/cran.scm (r-xts): Update to 0.13.1.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
200e08161f
gnu: r-recipes: Update to 1.0.6. 
* gnu/packages/cran.scm (r-recipes): Update to 1.0.6.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
fd5ff35dde
gnu: r-fitdistrplus: Update to 1.1-11. 
* gnu/packages/cran.scm (r-fitdistrplus): Update to 1.1-11.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
e9d5defb87
gnu: r-ctrdata: Update to 1.13.0. 
* gnu/packages/cran.scm (r-ctrdata): Update to 1.13.0.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
7e88aaefc0
gnu: r-ps: Update to 1.7.5. 
* gnu/packages/cran.scm (r-ps): Update to 1.7.5.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
6a945dd12c
gnu: r-fontawesome: Update to 0.5.1. 
* gnu/packages/cran.scm (r-fontawesome): Update to 0.5.1.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
cf0453d1d5
gnu: r-climatol: Update to 4.0.0. 
* gnu/packages/cran.scm (r-climatol): Update to 4.0.0.
[propagated-inputs]: Remove r-mapdata and r-maps.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
b1880c7759
gnu: r-carrier: Update to 0.1.1. 
* gnu/packages/cran.scm (r-carrier): Update to 0.1.1.
[propagated-inputs]: Remove r-pryr; add r-lobstr.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
f80e8e4574
gnu: r-cplm: Update to 0.7-11. 
* gnu/packages/cran.scm (r-cplm): Update to 0.7-11.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
5f061c25f3
gnu: r-castor: Update to 1.7.9. 
* gnu/packages/cran.scm (r-castor): Update to 1.7.9.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
2b08f6874e
gnu: r-tictoc: Update to 1.2. 
* gnu/packages/bioinformatics.scm (r-tictoc): Update to 1.2.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
49afe64152
gnu: r-radiant-data: Update to 1.5.6. 
* gnu/packages/cran.scm (r-radiant-data): Update to 1.5.6.
[source]: Delete minified JavaScript.
[arguments]: Add build phase 'process-javascript.
[native-inputs]: Add sources for html2canvas.js.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
376c52a949
gnu: r-rliger: Strip jar timestamps. 
* gnu/packages/cran.scm (r-rliger)[arguments]: Add phase
'strip-jar-timestamps; remove trailing #T; add ant-build-system modules.
[source]: Simplify snippet.
[native-inputs]: Add zip.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
46d78bf045
gnu: r-hpar: Avoid internet access. 
ExperimentHub::createHubAccessors needs internet access.  When R tests if the
package can be loaded it runs zzz.R, which contains the call to
createHubAccessors.  We set the variable GUIX_BUILD to conditionally disable
this call.

* gnu/packages/bioconductor.scm (r-hpar)[arguments]: Add two build phases:
'set-HOME and 'avoid-internet-access.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
9a2908211c
gnu: r-coin: Delete file with bad encoding. 
* gnu/packages/cran.scm (r-coin)[arguments]: Add phase
'remove-test-file-with-latin-encoding.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
63dea3caf0
gnu: r-cplm: Fix build with R 4.3.0. 
* gnu/packages/cran.scm (r-cplm)[arguments]: Update headers to find definition
for GET_SLOT.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
6cb123b190
gnu: r-phyloseq: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.44.0.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
e0c28e52e4
gnu: r-tximeta: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.18.0.
 2023-04-29 20:28:08 +02:00
Ricardo Wurmus
a605826139
gnu: r-tricycle: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.8.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus
c33697b714
gnu: r-biscuiteer: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.14.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus
04978d4592
gnu: r-omnipathr: Update to 3.8.0. 
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.8.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus
b2a3e274ec
gnu: r-omicade4: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.40.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus
15f364a933
gnu: r-dmrseq: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.20.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus
3862877bb2
gnu: r-dada2: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-dada2): Update to 1.28.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus
56586f9b9e
gnu: r-bsseq: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.36.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus
096133af16
gnu: r-biotmle: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.24.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus
0f594abe26
gnu: r-biotip: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-biotip): Update to 1.14.0.
 2023-04-29 20:28:07 +02:00